RNA–Protein interactions for RNA: ENST00000621967.4

FAM3A-222, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 1,901 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-222ENST00000621967 PSORS1C2Q9UIG4 136 aa10.45□□□□□ -0.74
FAM3A-222ENST00000621967 H0Y9P7 68 aa10.45□□□□□ -0.74
FAM3A-222ENST00000621967 ASB16-AS1Q495Z4 193 aa10.43□□□□□ -0.74
FAM3A-222ENST00000621967 MPLKIPQ8TAP9 179 aa10.41□□□□□ -0.74
FAM3A-222ENST00000621967 MOBPQ13875 183 aa10.41□□□□□ -0.74
FAM3A-222ENST00000621967 ZNF861PO60384 105 aa10.4□□□□□ -0.74
FAM3A-222ENST00000621967 RYR1P21817 5038 aa10.4□□□□□ -0.74
FAM3A-222ENST00000621967 SMR3BP02814 79 aaPredicted RBP10.39□□□□□ -0.75
FAM3A-222ENST00000621967 SPANXA2-OT1Q8N9U9 137 aa10.39□□□□□ -0.75
FAM3A-222ENST00000621967 BIRC6Q9NR09 4857 aa10.39□□□□□ -0.75
FAM3A-222ENST00000621967 HSPG2P98160 4391 aa10.38□□□□□ -0.75
FAM3A-222ENST00000621967 KIAA1109Q2LD37 5005 aa10.38□□□□□ -0.75
FAM3A-222ENST00000621967 PRR4Q16378 134 aa10.37□□□□□ -0.75
FAM3A-222ENST00000621967 PRO0628Q9UI54 55 aa10.35□□□□□ -0.75
FAM3A-222ENST00000621967 FAT1Q14517 4588 aa10.35□□□□□ -0.75
FAM3A-222ENST00000621967 Q1T7F1 81 aa10.35□□□□□ -0.75
FAM3A-222ENST00000621967 C8orf17Q9NRJ1 99 aa10.35□□□□□ -0.75
FAM3A-222ENST00000621967 TP53AIP1Q9HCN2 124 aa10.33□□□□□ -0.76
FAM3A-222ENST00000621967 A0A1B0GVX0 72 aa10.32□□□□□ -0.76
FAM3A-222ENST00000621967 ANAPC11Q9NYG5 84 aa10.32□□□□□ -0.76
FAM3A-222ENST00000621967 VPS13BQ7Z7G8 4022 aa10.32□□□□□ -0.76
FAM3A-222ENST00000621967 FAM229AH3BQW9 127 aa10.3□□□□□ -0.76
FAM3A-222ENST00000621967 IGLV7-43P04211 117 aa10.29□□□□□ -0.76
FAM3A-222ENST00000621967 IGHV6-1A0A0B4J1U7 121 aa10.26□□□□□ -0.77
FAM3A-222ENST00000621967 PLA2G1BP04054 148 aaKnown RBP10.26□□□□□ -0.77
FAM3A-222ENST00000621967 Q5VSD8 79 aa10.26□□□□□ -0.77
FAM3A-222ENST00000621967 Q8N1X5 172 aa10.24□□□□□ -0.77
FAM3A-222ENST00000621967 MRPL34Q9BQ48 92 aaKnown RBP10.23□□□□□ -0.77
FAM3A-222ENST00000621967 IGLV7-46A0A075B6I9 117 aa10.23□□□□□ -0.77
FAM3A-222ENST00000621967 BRK1Q8WUW1 75 aa10.22□□□□□ -0.77
FAM3A-222ENST00000621967 CD164Q04900 197 aa10.21□□□□□ -0.78
FAM3A-222ENST00000621967 A0A087X002 238 aa10.2□□□□□ -0.78
FAM3A-222ENST00000621967 NOTCH2NLQ7Z3S9 236 aa10.2□□□□□ -0.78
FAM3A-222ENST00000621967 V9GYY9 64 aa10.19□□□□□ -0.78
FAM3A-222ENST00000621967 KRTAP10-4P60372 401 aaPredicted RBP10.18□□□□□ -0.78
FAM3A-222ENST00000621967 NDUFS5O43920 106 aa10.17□□□□□ -0.78
FAM3A-222ENST00000621967 KRTAP17-1Q9BYP8 105 aa10.17□□□□□ -0.78
FAM3A-222ENST00000621967 HERC2O95714 4834 aa10.16□□□□□ -0.78
FAM3A-222ENST00000621967 SSBP3-AS1Q7Z2R9 100 aa10.16□□□□□ -0.78
FAM3A-222ENST00000621967 PCOTHQ58A44 107 aa10.15□□□□□ -0.79
FAM3A-222ENST00000621967 PSPHP1O15172 72 aa10.13□□□□□ -0.79
FAM3A-222ENST00000621967 C1orf195Q5TG92 126 aa10.13□□□□□ -0.79
FAM3A-222ENST00000621967 SPINK6Q6UWN8 80 aa10.13□□□□□ -0.79
FAM3A-222ENST00000621967 COA5Q86WW8 74 aa10.12□□□□□ -0.79
FAM3A-222ENST00000621967 Q8N9P0 234 aaPredicted RBP10.11□□□□□ -0.79
FAM3A-222ENST00000621967 KRTAP13-3Q3SY46 172 aa10.09□□□□□ -0.79
FAM3A-222ENST00000621967 A8MUN3 132 aa10.09□□□□□ -0.79
FAM3A-222ENST00000621967 LIMD2Q9BT23 127 aa10.08□□□□□ -0.8
FAM3A-222ENST00000621967 C8orf87E5RJ46 101 aa10.07□□□□□ -0.8
FAM3A-222ENST00000621967 PKHD1L1Q86WI1 4243 aa10.06□□□□□ -0.8
FAM3A-222ENST00000621967 LOC101927531A0A1B0GV80 90 aa10.06□□□□□ -0.8
FAM3A-222ENST00000621967 Q5VV11 94 aa10.06□□□□□ -0.8
FAM3A-222ENST00000621967 Q5W150 140 aa10.05□□□□□ -0.8
FAM3A-222ENST00000621967 KRTAP4-5Q9BYR2 181 aa10.05□□□□□ -0.8
FAM3A-222ENST00000621967 KRTAP13-2Q52LG2 175 aa10.03□□□□□ -0.8
FAM3A-222ENST00000621967 ABCA13Q86UQ4 5058 aa9.99□□□□□ -0.81
FAM3A-222ENST00000621967 HRES1P13985 223 aa9.98□□□□□ -0.81
FAM3A-222ENST00000621967 KRTAP1-4P0C5Y4 121 aa9.97□□□□□ -0.81
FAM3A-222ENST00000621967 PRR15LQ9BU68 103 aa9.97□□□□□ -0.81
FAM3A-222ENST00000621967 LINC00313P59037 77 aa9.96□□□□□ -0.81
FAM3A-222ENST00000621967 FLG2Q5D862 2391 aaPredicted RBP9.96□□□□□ -0.82
FAM3A-222ENST00000621967 MYCBP2O75592 4640 aa9.94□□□□□ -0.82
FAM3A-222ENST00000621967 Q75L30 129 aa9.94□□□□□ -0.82
FAM3A-222ENST00000621967 LRP1Q07954 4544 aaKnown RBP9.92□□□□□ -0.82
FAM3A-222ENST00000621967 LINC01558Q9Y6Z2 57 aa9.92□□□□□ -0.82
FAM3A-222ENST00000621967 FAT3Q8TDW7 4589 aa9.92□□□□□ -0.82
FAM3A-222ENST00000621967 CHKB-CPT1BH3BT56 60 aa9.91□□□□□ -0.82
FAM3A-222ENST00000621967 PRR26Q8N8Z3 221 aa9.9□□□□□ -0.83
FAM3A-222ENST00000621967 KRTAP16-1A8MUX0 517 aa9.89□□□□□ -0.83
FAM3A-222ENST00000621967 SPAG11AQ6PDA7 123 aa9.87□□□□□ -0.83
FAM3A-222ENST00000621967 TYMSOSQ8TAI1 123 aa9.85□□□□□ -0.83
FAM3A-222ENST00000621967 A8MU10 97 aa9.84□□□□□ -0.83
FAM3A-222ENST00000621967 IGKV2-30P06310 120 aa9.84□□□□□ -0.83
FAM3A-222ENST00000621967 ACYP2P14621 99 aa9.82□□□□□ -0.84
FAM3A-222ENST00000621967 DMAC1Q96GE9 116 aa9.82□□□□□ -0.84
FAM3A-222ENST00000621967 TNXBP22105 4242 aa9.81□□□□□ -0.84
FAM3A-222ENST00000621967 PCLOQ9Y6V0 5065 aa9.79□□□□□ -0.84
FAM3A-222ENST00000621967 C4orf48Q5BLP8 95 aa9.79□□□□□ -0.84
FAM3A-222ENST00000621967 A6NED7 52 aa9.78□□□□□ -0.84
FAM3A-222ENST00000621967 LCA10Q71F78 164 aa9.78□□□□□ -0.84
FAM3A-222ENST00000621967 RETNLBQ9BQ08 111 aa9.78□□□□□ -0.84
FAM3A-222ENST00000621967 SPINK1P00995 79 aa9.77□□□□□ -0.85
FAM3A-222ENST00000621967 KRTAP10-8P60410 259 aa9.77□□□□□ -0.85
FAM3A-222ENST00000621967 J3QL48 77 aa9.76□□□□□ -0.85
FAM3A-222ENST00000621967 MT1HL1P0DM35 61 aa9.75□□□□□ -0.85
FAM3A-222ENST00000621967 LINC00304Q8N9R0 145 aa9.74□□□□□ -0.85
FAM3A-222ENST00000621967 CDC42SE1Q9NRR8 79 aa9.73□□□□□ -0.85
FAM3A-222ENST00000621967 RPS29P62273 56 aaKnown RBP9.72□□□□□ -0.85
FAM3A-222ENST00000621967 ATP11AUNQ6ZP68 121 aa9.69□□□□□ -0.86
FAM3A-222ENST00000621967 PMAIP1Q13794 54 aa9.68□□□□□ -0.86
FAM3A-222ENST00000621967 DMBT1Q9UGM3 2413 aaPredicted RBP9.67□□□□□ -0.86
FAM3A-222ENST00000621967 SPINK7P58062 85 aa9.67□□□□□ -0.86
FAM3A-222ENST00000621967 IGKV2D-30A0A075B6S6 120 aa9.64□□□□□ -0.87
FAM3A-222ENST00000621967 SPTSSBQ8NFR3 76 aa9.62□□□□□ -0.87
FAM3A-222ENST00000621967 A6NN06 94 aa9.56□□□□□ -0.88
FAM3A-222ENST00000621967 C7orf65Q6ZTY9 151 aa9.54□□□□□ -0.88
FAM3A-222ENST00000621967 A0A1B0GU69 56 aa9.52□□□□□ -0.88
FAM3A-222ENST00000621967 HERC1Q15751 4861 aa9.49□□□□□ -0.89
FAM3A-222ENST00000621967 KTN1-AS1Q86SY8 53 aa9.49□□□□□ -0.89
FAM3A-222ENST00000621967 C20orf166-AS1Q96NR2 134 aa9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 145.8 ms