RNA–Protein interactions for RNA: ENST00000621728.4

SEMA6C-210, Transcript of semaphorin 6C, humanhuman

TSL 1 (best) BASIC

Gene SEMA6C, Length 1,918 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-210ENST00000621728 FAM236CP0DP71 79 aa10.86□□□□□ -0.67
SEMA6C-210ENST00000621728 TYMSOSQ8TAI1 123 aa10.86□□□□□ -0.67
SEMA6C-210ENST00000621728 TMEM254Q8TBM7 123 aa10.83□□□□□ -0.68
SEMA6C-210ENST00000621728 SMIM26A0A096LP01 95 aa10.82□□□□□ -0.68
SEMA6C-210ENST00000621728 ATP5EP56381 51 aaPredicted RBP10.82□□□□□ -0.68
SEMA6C-210ENST00000621728 V9GYY9 64 aa10.82□□□□□ -0.68
SEMA6C-210ENST00000621728 SEC61GP60059 68 aa10.82□□□□□ -0.68
SEMA6C-210ENST00000621728 FAT3Q8TDW7 4589 aa10.81□□□□□ -0.68
SEMA6C-210ENST00000621728 FLG2Q5D862 2391 aaPredicted RBP10.81□□□□□ -0.68
SEMA6C-210ENST00000621728 K7EQZ3 153 aa10.79□□□□□ -0.68
SEMA6C-210ENST00000621728 HCG22E2RYF7 251 aa10.78□□□□□ -0.68
SEMA6C-210ENST00000621728 SNURFQ9Y675 71 aa10.78□□□□□ -0.68
SEMA6C-210ENST00000621728 MYCBP2O75592 4640 aa10.78□□□□□ -0.68
SEMA6C-210ENST00000621728 HERC2O95714 4834 aa10.77□□□□□ -0.69
SEMA6C-210ENST00000621728 A0A0U1RQV1 116 aa10.77□□□□□ -0.69
SEMA6C-210ENST00000621728 DEFB116Q30KQ4 102 aa10.75□□□□□ -0.69
SEMA6C-210ENST00000621728 TNXBP22105 4242 aa10.75□□□□□ -0.69
SEMA6C-210ENST00000621728 CD164Q04900 197 aa10.74□□□□□ -0.69
SEMA6C-210ENST00000621728 C1orf195Q5TG92 126 aa10.73□□□□□ -0.69
SEMA6C-210ENST00000621728 LINC00304Q8N9R0 145 aa10.72□□□□□ -0.69
SEMA6C-210ENST00000621728 LINC00472Q9H8W2 130 aa10.72□□□□□ -0.69
SEMA6C-210ENST00000621728 ABCA13Q86UQ4 5058 aa10.7□□□□□ -0.7
SEMA6C-210ENST00000621728 KRTAP10-8P60410 259 aa10.7□□□□□ -0.7
SEMA6C-210ENST00000621728 A8MWP4 228 aa10.69□□□□□ -0.7
SEMA6C-210ENST00000621728 C4orf48Q5BLP8 95 aa10.69□□□□□ -0.7
SEMA6C-210ENST00000621728 PRR15Q8IV56 129 aa10.68□□□□□ -0.7
SEMA6C-210ENST00000621728 Q96NJ1 140 aa10.68□□□□□ -0.7
SEMA6C-210ENST00000621728 KRTAP29-1A8MX34 341 aaPredicted RBP10.64□□□□□ -0.71
SEMA6C-210ENST00000621728 SPINK1P00995 79 aa10.64□□□□□ -0.71
SEMA6C-210ENST00000621728 MT1HL1P0DM35 61 aa10.63□□□□□ -0.71
SEMA6C-210ENST00000621728 FP248Q71RG6 208 aaPredicted RBP10.63□□□□□ -0.71
SEMA6C-210ENST00000621728 ZCCHC13Q8WW36 166 aaKnown RBP10.62□□□□□ -0.71
SEMA6C-210ENST00000621728 NDUFB1O75438 58 aa10.62□□□□□ -0.71
SEMA6C-210ENST00000621728 SPAG11AQ6PDA7 123 aa10.61□□□□□ -0.71
SEMA6C-210ENST00000621728 CASC2Q6XLA1 102 aa10.6□□□□□ -0.71
SEMA6C-210ENST00000621728 H3BPC8 53 aa10.6□□□□□ -0.71
SEMA6C-210ENST00000621728 LIMD2Q9BT23 127 aa10.59□□□□□ -0.71
SEMA6C-210ENST00000621728 WFDC13Q8IUB5 93 aa10.58□□□□□ -0.72
SEMA6C-210ENST00000621728 MP68P56378 58 aa10.58□□□□□ -0.72
SEMA6C-210ENST00000621728 ASB16-AS1Q495Z4 193 aa10.57□□□□□ -0.72
SEMA6C-210ENST00000621728 BRK1Q8WUW1 75 aa10.57□□□□□ -0.72
SEMA6C-210ENST00000621728 RPS29P62273 56 aaKnown RBP10.54□□□□□ -0.72
SEMA6C-210ENST00000621728 MMP24-AS1A0A0U1RRL7 71 aa10.52□□□□□ -0.73
SEMA6C-210ENST00000621728 RETNLBQ9BQ08 111 aa10.52□□□□□ -0.73
SEMA6C-210ENST00000621728 DMBT1Q9UGM3 2413 aaPredicted RBP10.51□□□□□ -0.73
SEMA6C-210ENST00000621728 TP53AIP1Q9HCN2 124 aa10.48□□□□□ -0.73
SEMA6C-210ENST00000621728 hDV103S1A0JD37 113 aa10.48□□□□□ -0.73
SEMA6C-210ENST00000621728 IGHV6-1A0A0B4J1U7 121 aa10.45□□□□□ -0.74
SEMA6C-210ENST00000621728 TRAV22A0A0B4J277 110 aa10.45□□□□□ -0.74
SEMA6C-210ENST00000621728 A0A1B0GVX0 72 aa10.45□□□□□ -0.74
SEMA6C-210ENST00000621728 H0Y9P7 68 aa10.45□□□□□ -0.74
SEMA6C-210ENST00000621728 PMAIP1Q13794 54 aa10.45□□□□□ -0.74
SEMA6C-210ENST00000621728 CYP4F30PQ9H0H9 118 aa10.45□□□□□ -0.74
SEMA6C-210ENST00000621728 NOTCH2NLQ7Z3S9 236 aa10.44□□□□□ -0.74
SEMA6C-210ENST00000621728 C8orf17Q9NRJ1 99 aa10.44□□□□□ -0.74
SEMA6C-210ENST00000621728 LINC00208Q96KT6 92 aa10.43□□□□□ -0.74
SEMA6C-210ENST00000621728 SPANXA2-OT1Q8N9U9 137 aa10.42□□□□□ -0.74
SEMA6C-210ENST00000621728 PCLOQ9Y6V0 5065 aa10.4□□□□□ -0.74
SEMA6C-210ENST00000621728 J3QL48 77 aa10.37□□□□□ -0.75
SEMA6C-210ENST00000621728 C1orf64Q8NEQ6 169 aa10.36□□□□□ -0.75
SEMA6C-210ENST00000621728 MRPL34Q9BQ48 92 aaKnown RBP10.35□□□□□ -0.75
SEMA6C-210ENST00000621728 C8orf87E5RJ46 101 aa10.31□□□□□ -0.76
SEMA6C-210ENST00000621728 LINC00313P59037 77 aa10.3□□□□□ -0.76
SEMA6C-210ENST00000621728 MPLKIPQ8TAP9 179 aa10.3□□□□□ -0.76
SEMA6C-210ENST00000621728 C9orf92A6NGG3 77 aa10.29□□□□□ -0.76
SEMA6C-210ENST00000621728 Q1T7F1 81 aa10.29□□□□□ -0.76
SEMA6C-210ENST00000621728 KRTAP16-1A8MUX0 517 aa10.25□□□□□ -0.77
SEMA6C-210ENST00000621728 NDUFS5O43920 106 aa10.24□□□□□ -0.77
SEMA6C-210ENST00000621728 PRR4Q16378 134 aa10.24□□□□□ -0.77
SEMA6C-210ENST00000621728 IGLV7-46A0A075B6I9 117 aa10.23□□□□□ -0.77
SEMA6C-210ENST00000621728 LOC101927531A0A1B0GV80 90 aa10.18□□□□□ -0.78
SEMA6C-210ENST00000621728 KRTAP13-3Q3SY46 172 aa10.15□□□□□ -0.79
SEMA6C-210ENST00000621728 HERC1Q15751 4861 aa10.13□□□□□ -0.79
SEMA6C-210ENST00000621728 LPAP08519 4548 aa10.12□□□□□ -0.79
SEMA6C-210ENST00000621728 Q8N9P0 234 aaPredicted RBP10.12□□□□□ -0.79
SEMA6C-210ENST00000621728 PCOTHQ58A44 107 aa10.08□□□□□ -0.8
SEMA6C-210ENST00000621728 KTN1-AS1Q86SY8 53 aa10.07□□□□□ -0.8
SEMA6C-210ENST00000621728 XP32Q5T750 250 aa10.05□□□□□ -0.8
SEMA6C-210ENST00000621728 Q5W150 140 aa10.05□□□□□ -0.8
SEMA6C-210ENST00000621728 A8MUU9 505 aa10.05□□□□□ -0.8
SEMA6C-210ENST00000621728 COA5Q86WW8 74 aa10.05□□□□□ -0.8
SEMA6C-210ENST00000621728 C20orf166-AS1Q96NR2 134 aa10.05□□□□□ -0.8
SEMA6C-210ENST00000621728 TPRXLQ17RH7 258 aa10.03□□□□□ -0.8
SEMA6C-210ENST00000621728 LRP2P98164 4655 aa9.98□□□□□ -0.81
SEMA6C-210ENST00000621728 Q75L30 129 aa9.97□□□□□ -0.81
SEMA6C-210ENST00000621728 RBM12B-AS1Q9P1G2 102 aa9.96□□□□□ -0.81
SEMA6C-210ENST00000621728 PSPHP1O15172 72 aa9.94□□□□□ -0.82
SEMA6C-210ENST00000621728 RPL37P61927 97 aaKnown RBP9.94□□□□□ -0.82
SEMA6C-210ENST00000621728 HMCN2Q8NDA2 5059 aa9.94□□□□□ -0.82
SEMA6C-210ENST00000621728 ATP11AUNQ6ZP68 121 aa9.94□□□□□ -0.82
SEMA6C-210ENST00000621728 IGKV2-30P06310 120 aa9.92□□□□□ -0.82
SEMA6C-210ENST00000621728 HRES1P13985 223 aa9.91□□□□□ -0.82
SEMA6C-210ENST00000621728 ACYP2P14621 99 aa9.9□□□□□ -0.83
SEMA6C-210ENST00000621728 Q5VV11 94 aa9.9□□□□□ -0.83
SEMA6C-210ENST00000621728 A8MUN3 132 aa9.88□□□□□ -0.83
SEMA6C-210ENST00000621728 DMAC1Q96GE9 116 aa9.86□□□□□ -0.83
SEMA6C-210ENST00000621728 LINC01558Q9Y6Z2 57 aa9.86□□□□□ -0.83
SEMA6C-210ENST00000621728 IGKV2D-30A0A075B6S6 120 aa9.82□□□□□ -0.84
SEMA6C-210ENST00000621728 CHKB-CPT1BH3BT56 60 aa9.82□□□□□ -0.84
SEMA6C-210ENST00000621728 PRR15LQ9BU68 103 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms