RNA–Protein interactions for RNA: ENST00000620770.1

MUC1-229, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-229ENST00000620770 Q6ZVQ6 151 aa7.34□□□□□ -1.23
MUC1-229ENST00000620770 LINC00846Q9NV44 126 aa7.33□□□□□ -1.24
MUC1-229ENST00000620770 A0A1B0GVX0 72 aa7.32□□□□□ -1.24
MUC1-229ENST00000620770 NDUFB1O75438 58 aa7.31□□□□□ -1.24
MUC1-229ENST00000620770 UBL5Q9BZL1 73 aa7.31□□□□□ -1.24
MUC1-229ENST00000620770 MUC17Q685J3 4493 aa7.3□□□□□ -1.24
MUC1-229ENST00000620770 A8MWP4 228 aa7.3□□□□□ -1.24
MUC1-229ENST00000620770 BPY2O14599 106 aa7.3□□□□□ -1.24
MUC1-229ENST00000620770 LINC00313P59037 77 aa7.3□□□□□ -1.24
MUC1-229ENST00000620770 NOTCH2NLQ7Z3S9 236 aa7.3□□□□□ -1.24
MUC1-229ENST00000620770 IGKV3D-7A0A0C4DH55 119 aa7.29□□□□□ -1.24
MUC1-229ENST00000620770 SEC61BP60468 96 aaKnown RBP7.29□□□□□ -1.24
MUC1-229ENST00000620770 C8orf87E5RJ46 101 aa7.27□□□□□ -1.25
MUC1-229ENST00000620770 RPL37P61927 97 aaKnown RBP7.27□□□□□ -1.25
MUC1-229ENST00000620770 PCOTHQ58A44 107 aa7.26□□□□□ -1.25
MUC1-229ENST00000620770 FAT4Q6V0I7 4981 aa7.25□□□□□ -1.25
MUC1-229ENST00000620770 K7EQZ3 153 aa7.25□□□□□ -1.25
MUC1-229ENST00000620770 KRTAP16-1A8MUX0 517 aa7.24□□□□□ -1.25
MUC1-229ENST00000620770 Q75L30 129 aa7.24□□□□□ -1.25
MUC1-229ENST00000620770 PRR15Q8IV56 129 aa7.24□□□□□ -1.25
MUC1-229ENST00000620770 Q8N9L7 120 aa7.24□□□□□ -1.25
MUC1-229ENST00000620770 C8orf17Q9NRJ1 99 aa7.24□□□□□ -1.25
MUC1-229ENST00000620770 ACYP1P07311 99 aa7.22□□□□□ -1.25
MUC1-229ENST00000620770 LCE2AQ5TA79 106 aaPredicted RBP7.22□□□□□ -1.25
MUC1-229ENST00000620770 C20orf166-AS1Q96NR2 134 aa7.22□□□□□ -1.25
MUC1-229ENST00000620770 FAM240AA0A1B0GVK7 77 aa7.21□□□□□ -1.26
MUC1-229ENST00000620770 A8MUU9 505 aa7.21□□□□□ -1.26
MUC1-229ENST00000620770 ATP11AUNQ6ZP68 121 aa7.2□□□□□ -1.26
MUC1-229ENST00000620770 MMP24-AS1A0A0U1RRL7 71 aa7.19□□□□□ -1.26
MUC1-229ENST00000620770 KRTAP4-1Q9BYQ7 146 aa7.17□□□□□ -1.26
MUC1-229ENST00000620770 J3QR89 54 aa7.16□□□□□ -1.26
MUC1-229ENST00000620770 WFDC13Q8IUB5 93 aa7.16□□□□□ -1.26
MUC1-229ENST00000620770 hDV103S1A0JD37 113 aa7.15□□□□□ -1.26
MUC1-229ENST00000620770 CXCL6P80162 114 aa7.15□□□□□ -1.26
MUC1-229ENST00000620770 KRTAP9-2Q9BYQ4 174 aa7.15□□□□□ -1.26
MUC1-229ENST00000620770 TMEM254Q8TBM7 123 aa7.14□□□□□ -1.27
MUC1-229ENST00000620770 MRPL34Q9BQ48 92 aaKnown RBP7.13□□□□□ -1.27
MUC1-229ENST00000620770 NDUFS5O43920 106 aa7.12□□□□□ -1.27
MUC1-229ENST00000620770 CASC2Q6XLA1 102 aa7.12□□□□□ -1.27
MUC1-229ENST00000620770 Q8N9P0 234 aaPredicted RBP7.11□□□□□ -1.27
MUC1-229ENST00000620770 HCG22E2RYF7 251 aa7.1□□□□□ -1.27
MUC1-229ENST00000620770 ATP5EP2Q5VTU8 51 aa7.1□□□□□ -1.27
MUC1-229ENST00000620770 LINC00643Q86TS7 51 aa7.09□□□□□ -1.27
MUC1-229ENST00000620770 ZCCHC13Q8WW36 166 aaKnown RBP7.08□□□□□ -1.28
MUC1-229ENST00000620770 HIST1H4AP62805 103 aaKnown RBP7.07□□□□□ -1.28
MUC1-229ENST00000620770 K7ERU9 68 aa7.04□□□□□ -1.28
MUC1-229ENST00000620770 A0A087WVE0 104 aa7□□□□□ -1.29
MUC1-229ENST00000620770 Q5W150 140 aa6.96□□□□□ -1.3
MUC1-229ENST00000620770 KRTAP9-6A0A140TA67 174 aa6.94□□□□□ -1.3
MUC1-229ENST00000620770 SPINK7P58062 85 aa6.94□□□□□ -1.3
MUC1-229ENST00000620770 COX6B2Q6YFQ2 88 aa6.94□□□□□ -1.3
MUC1-229ENST00000620770 IGKV2D-30A0A075B6S6 120 aa6.92□□□□□ -1.3
MUC1-229ENST00000620770 IGKV2-30P06310 120 aa6.92□□□□□ -1.3
MUC1-229ENST00000620770 MT-ATP8P03928 68 aa6.91□□□□□ -1.3
MUC1-229ENST00000620770 KRTAP19-2Q3LHN2 52 aa6.91□□□□□ -1.3
MUC1-229ENST00000620770 LCE2CQ5TA81 110 aa6.91□□□□□ -1.3
MUC1-229ENST00000620770 TP53AIP1Q9HCN2 124 aa6.91□□□□□ -1.3
MUC1-229ENST00000620770 HRES1P13985 223 aa6.9□□□□□ -1.3
MUC1-229ENST00000620770 LCE2DQ5TA82 110 aaPredicted RBP6.88□□□□□ -1.31
MUC1-229ENST00000620770 FAM236DA0A1B0GTK5 79 aa6.87□□□□□ -1.31
MUC1-229ENST00000620770 FAM236CP0DP71 79 aa6.87□□□□□ -1.31
MUC1-229ENST00000620770 C7orf65Q6ZTY9 151 aa6.87□□□□□ -1.31
MUC1-229ENST00000620770 MT1HP80294 61 aa6.86□□□□□ -1.31
MUC1-229ENST00000620770 RBM12B-AS1Q9P1G2 102 aa6.86□□□□□ -1.31
MUC1-229ENST00000620770 TRAV22A0A0B4J277 110 aa6.83□□□□□ -1.32
MUC1-229ENST00000620770 UQCRQO14949 82 aa6.83□□□□□ -1.32
MUC1-229ENST00000620770 IMUPQ9GZP8 106 aa6.83□□□□□ -1.32
MUC1-229ENST00000620770 SCGB1A1P11684 91 aa6.82□□□□□ -1.32
MUC1-229ENST00000620770 MPLKIPQ8TAP9 179 aa6.82□□□□□ -1.32
MUC1-229ENST00000620770 H0Y9P7 68 aa6.8□□□□□ -1.32
MUC1-229ENST00000620770 FAM236AA0A1B0GUQ0 79 aa6.78□□□□□ -1.32
MUC1-229ENST00000620770 FAM236BA0A1B0GV22 79 aa6.78□□□□□ -1.32
MUC1-229ENST00000620770 M0R2T5 61 aa6.78□□□□□ -1.32
MUC1-229ENST00000620770 OCR1Q9BZK8 76 aa6.78□□□□□ -1.32
MUC1-229ENST00000620770 ATOX1O00244 68 aa6.75□□□□□ -1.33
MUC1-229ENST00000620770 KRTAP10-6P60371 365 aaPredicted RBP6.75□□□□□ -1.33
MUC1-229ENST00000620770 FSIP2Q5CZC0 6907 aa6.74□□□□□ -1.33
MUC1-229ENST00000620770 LOC101927531A0A1B0GV80 90 aa6.74□□□□□ -1.33
MUC1-229ENST00000620770 LORP23490 312 aaPredicted RBP6.74□□□□□ -1.33
MUC1-229ENST00000620770 C4orf26Q17RF5 130 aa6.74□□□□□ -1.33
MUC1-229ENST00000620770 CRCT1Q9UGL9 99 aa6.74□□□□□ -1.33
MUC1-229ENST00000620770 CYP4F30PQ9H0H9 118 aa6.73□□□□□ -1.33
MUC1-229ENST00000620770 MP68P56378 58 aa6.72□□□□□ -1.33
MUC1-229ENST00000620770 LINC00208Q96KT6 92 aa6.72□□□□□ -1.33
MUC1-229ENST00000620770 FLGP20930 4061 aaPredicted RBP6.72□□□□□ -1.33
MUC1-229ENST00000620770 C1orf64Q8NEQ6 169 aa6.71□□□□□ -1.34
MUC1-229ENST00000620770 C5orf47Q569G3 176 aa6.69□□□□□ -1.34
MUC1-229ENST00000620770 SMIM20Q8N5G0 67 aa6.66□□□□□ -1.34
MUC1-229ENST00000620770 TRAV7A0A075B6U4 112 aa6.65□□□□□ -1.34
MUC1-229ENST00000620770 H1FX-AS1Q4G0G2 97 aa6.65□□□□□ -1.34
MUC1-229ENST00000620770 H3BPC8 53 aa6.62□□□□□ -1.35
MUC1-229ENST00000620770 KLKP1Q107X0 134 aa6.62□□□□□ -1.35
MUC1-229ENST00000620770 KRTAP3-1Q9BYR8 98 aa6.6□□□□□ -1.35
MUC1-229ENST00000620770 KRTAP3-3Q9BYR6 98 aa6.59□□□□□ -1.35
MUC1-229ENST00000620770 KRTAP3-2Q9BYR7 98 aa6.59□□□□□ -1.35
MUC1-229ENST00000620770 SERP2Q8N6R1 65 aa6.56□□□□□ -1.36
MUC1-229ENST00000620770 S4R3F8 94 aa6.54□□□□□ -1.36
MUC1-229ENST00000620770 SNURFQ9Y675 71 aa6.53□□□□□ -1.36
MUC1-229ENST00000620770 C20orf197Q8N268 126 aa6.51□□□□□ -1.37
MUC1-229ENST00000620770 LCA10Q71F78 164 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms