RNA–Protein interactions for RNA: ENST00000620709.4

CD40-207, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-207ENST00000620709 LINC00472Q9H8W2 130 aa9.07□□□□□ -0.96
CD40-207ENST00000620709 HIST1H4AP62805 103 aaKnown RBP9.06□□□□□ -0.96
CD40-207ENST00000620709 LIMD2Q9BT23 127 aa9.05□□□□□ -0.96
CD40-207ENST00000620709 J3KT08 172 aa9.04□□□□□ -0.96
CD40-207ENST00000620709 DEFB116Q30KQ4 102 aa9.04□□□□□ -0.96
CD40-207ENST00000620709 ASB16-AS1Q495Z4 193 aa9.04□□□□□ -0.96
CD40-207ENST00000620709 Q5XG85 94 aa9.04□□□□□ -0.96
CD40-207ENST00000620709 Q96NJ1 140 aa9.03□□□□□ -0.96
CD40-207ENST00000620709 SCGB1A1P11684 91 aa9.02□□□□□ -0.97
CD40-207ENST00000620709 DSCR10P59022 87 aa9.02□□□□□ -0.97
CD40-207ENST00000620709 KRTAP13-3Q3SY46 172 aa9.02□□□□□ -0.97
CD40-207ENST00000620709 RPS29P62273 56 aaKnown RBP9.01□□□□□ -0.97
CD40-207ENST00000620709 A0A087WVE0 104 aa9□□□□□ -0.97
CD40-207ENST00000620709 IGKV4-1P06312 121 aa9□□□□□ -0.97
CD40-207ENST00000620709 LCE2AQ5TA79 106 aaPredicted RBP9□□□□□ -0.97
CD40-207ENST00000620709 Q8N9L7 120 aa9□□□□□ -0.97
CD40-207ENST00000620709 A8MWP4 228 aa8.98□□□□□ -0.97
CD40-207ENST00000620709 K7EQZ3 153 aa8.98□□□□□ -0.97
CD40-207ENST00000620709 FAM236AA0A1B0GUQ0 79 aa8.96□□□□□ -0.97
CD40-207ENST00000620709 FAM236BA0A1B0GV22 79 aa8.96□□□□□ -0.97
CD40-207ENST00000620709 NDUFB1O75438 58 aa8.95□□□□□ -0.98
CD40-207ENST00000620709 KRTAP9-2Q9BYQ4 174 aa8.95□□□□□ -0.98
CD40-207ENST00000620709 PRR15Q8IV56 129 aa8.94□□□□□ -0.98
CD40-207ENST00000620709 SEC61BP60468 96 aaKnown RBP8.93□□□□□ -0.98
CD40-207ENST00000620709 C1orf195Q5TG92 126 aa8.93□□□□□ -0.98
CD40-207ENST00000620709 A0A1B0GVX0 72 aa8.89□□□□□ -0.99
CD40-207ENST00000620709 HCG22E2RYF7 251 aa8.88□□□□□ -0.99
CD40-207ENST00000620709 KRTAP4-1Q9BYQ7 146 aa8.88□□□□□ -0.99
CD40-207ENST00000620709 IGHV6-1A0A0B4J1U7 121 aa8.86□□□□□ -0.99
CD40-207ENST00000620709 ATOX1O00244 68 aa8.86□□□□□ -0.99
CD40-207ENST00000620709 XP32Q5T750 250 aa8.85□□□□□ -0.99
CD40-207ENST00000620709 MMP24-AS1A0A0U1RRL7 71 aa8.83□□□□□ -1
CD40-207ENST00000620709 C8orf17Q9NRJ1 99 aa8.83□□□□□ -1
CD40-207ENST00000620709 CASC2Q6XLA1 102 aa8.82□□□□□ -1
CD40-207ENST00000620709 WFDC13Q8IUB5 93 aa8.82□□□□□ -1
CD40-207ENST00000620709 ANAPC13Q9BS18 74 aa8.82□□□□□ -1
CD40-207ENST00000620709 C9orf92A6NGG3 77 aa8.81□□□□□ -1
CD40-207ENST00000620709 C8orf87E5RJ46 101 aa8.81□□□□□ -1
CD40-207ENST00000620709 hDV103S1A0JD37 113 aa8.8□□□□□ -1
CD40-207ENST00000620709 SMIM20Q8N5G0 67 aa8.79□□□□□ -1
CD40-207ENST00000620709 PCP4P48539 62 aa8.77□□□□□ -1.01
CD40-207ENST00000620709 NOTCH2NLQ7Z3S9 236 aa8.76□□□□□ -1.01
CD40-207ENST00000620709 LINC00313P59037 77 aa8.75□□□□□ -1.01
CD40-207ENST00000620709 TMEM254Q8TBM7 123 aa8.75□□□□□ -1.01
CD40-207ENST00000620709 PCOTHQ58A44 107 aa8.75□□□□□ -1.01
CD40-207ENST00000620709 SERP2Q8N6R1 65 aa8.74□□□□□ -1.01
CD40-207ENST00000620709 TRAV7A0A075B6U4 112 aa8.73□□□□□ -1.01
CD40-207ENST00000620709 MRPL34Q9BQ48 92 aaKnown RBP8.73□□□□□ -1.01
CD40-207ENST00000620709 OCR1Q9BZK8 76 aa8.72□□□□□ -1.01
CD40-207ENST00000620709 KRTAP9-6A0A140TA67 174 aa8.7□□□□□ -1.02
CD40-207ENST00000620709 COX7CP15954 63 aa8.69□□□□□ -1.02
CD40-207ENST00000620709 KRTAP16-1A8MUX0 517 aa8.65□□□□□ -1.02
CD40-207ENST00000620709 UQCRQO14949 82 aa8.65□□□□□ -1.02
CD40-207ENST00000620709 NDUFS5O43920 106 aa8.65□□□□□ -1.02
CD40-207ENST00000620709 TP53AIP1Q9HCN2 124 aa8.64□□□□□ -1.03
CD40-207ENST00000620709 LCE2CQ5TA81 110 aa8.64□□□□□ -1.03
CD40-207ENST00000620709 Q8N9P0 234 aaPredicted RBP8.63□□□□□ -1.03
CD40-207ENST00000620709 CCDC179H3BU77 68 aa8.6□□□□□ -1.03
CD40-207ENST00000620709 C5orf47Q569G3 176 aa8.59□□□□□ -1.03
CD40-207ENST00000620709 KRTAP19-2Q3LHN2 52 aa8.58□□□□□ -1.04
CD40-207ENST00000620709 RPL37P61927 97 aaKnown RBP8.57□□□□□ -1.04
CD40-207ENST00000620709 MT1HP80294 61 aa8.57□□□□□ -1.04
CD40-207ENST00000620709 LCE2DQ5TA82 110 aaPredicted RBP8.57□□□□□ -1.04
CD40-207ENST00000620709 TRAV22A0A0B4J277 110 aa8.56□□□□□ -1.04
CD40-207ENST00000620709 C20orf197Q8N268 126 aa8.56□□□□□ -1.04
CD40-207ENST00000620709 MP68P56378 58 aa8.55□□□□□ -1.04
CD40-207ENST00000620709 H0Y9P7 68 aa8.54□□□□□ -1.04
CD40-207ENST00000620709 C20orf166-AS1Q96NR2 134 aa8.54□□□□□ -1.04
CD40-207ENST00000620709 COX6B2Q6YFQ2 88 aa8.53□□□□□ -1.04
CD40-207ENST00000620709 A8MUU9 505 aa8.51□□□□□ -1.05
CD40-207ENST00000620709 H3BPC8 53 aa8.51□□□□□ -1.05
CD40-207ENST00000620709 KLKP1Q107X0 134 aa8.51□□□□□ -1.05
CD40-207ENST00000620709 FSIP2Q5CZC0 6907 aa8.51□□□□□ -1.05
CD40-207ENST00000620709 M0R2T5 61 aa8.5□□□□□ -1.05
CD40-207ENST00000620709 SNURFQ9Y675 71 aa8.49□□□□□ -1.05
CD40-207ENST00000620709 Q5W150 140 aa8.48□□□□□ -1.05
CD40-207ENST00000620709 Q75L30 129 aa8.48□□□□□ -1.05
CD40-207ENST00000620709 LINC00208Q96KT6 92 aa8.48□□□□□ -1.05
CD40-207ENST00000620709 C1orf64Q8NEQ6 169 aa8.45□□□□□ -1.06
CD40-207ENST00000620709 ZCCHC13Q8WW36 166 aaKnown RBP8.45□□□□□ -1.06
CD40-207ENST00000620709 CYSTM1Q9H1C7 97 aa8.44□□□□□ -1.06
CD40-207ENST00000620709 CRCT1Q9UGL9 99 aa8.44□□□□□ -1.06
CD40-207ENST00000620709 KRTAP10-6P60371 365 aaPredicted RBP8.43□□□□□ -1.06
CD40-207ENST00000620709 ATP11AUNQ6ZP68 121 aa8.43□□□□□ -1.06
CD40-207ENST00000620709 NDUFC1O43677 76 aa8.42□□□□□ -1.06
CD40-207ENST00000620709 FLGP20930 4061 aaPredicted RBP8.41□□□□□ -1.06
CD40-207ENST00000620709 LOC101927531A0A1B0GV80 90 aa8.41□□□□□ -1.06
CD40-207ENST00000620709 LORP23490 312 aaPredicted RBP8.4□□□□□ -1.06
CD40-207ENST00000620709 H7BZZ5 65 aa8.38□□□□□ -1.07
CD40-207ENST00000620709 IGKV2-30P06310 120 aa8.35□□□□□ -1.07
CD40-207ENST00000620709 CYP4F30PQ9H0H9 118 aa8.34□□□□□ -1.08
CD40-207ENST00000620709 TMEM258P61165 79 aa8.33□□□□□ -1.08
CD40-207ENST00000620709 IGKV2D-30A0A075B6S6 120 aa8.32□□□□□ -1.08
CD40-207ENST00000620709 C7orf65Q6ZTY9 151 aa8.31□□□□□ -1.08
CD40-207ENST00000620709 FAM236DA0A1B0GTK5 79 aa8.24□□□□□ -1.09
CD40-207ENST00000620709 FAM236CP0DP71 79 aa8.24□□□□□ -1.09
CD40-207ENST00000620709 ATP5EP56381 51 aaPredicted RBP8.24□□□□□ -1.09
CD40-207ENST00000620709 SPANXA2-OT1Q8N9U9 137 aa8.24□□□□□ -1.09
CD40-207ENST00000620709 SPINK7P58062 85 aa8.23□□□□□ -1.09
CD40-207ENST00000620709 HRES1P13985 223 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 210.4 ms