RNA–Protein interactions for RNA: ENST00000618148.1

VPS45-213, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,670 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-213ENST00000618148 SPAG11AQ6PDA7 123 aa4.32□□□□□ -1.72
VPS45-213ENST00000618148 TRBV7-7A0A0K0K1E9 115 aa4.32□□□□□ -1.72
VPS45-213ENST00000618148 LINC00304Q8N9R0 145 aa4.32□□□□□ -1.72
VPS45-213ENST00000618148 FAM240AA0A1B0GVK7 77 aa4.31□□□□□ -1.72
VPS45-213ENST00000618148 SPINK1P00995 79 aa4.31□□□□□ -1.72
VPS45-213ENST00000618148 J3QR89 54 aa4.3□□□□□ -1.72
VPS45-213ENST00000618148 DMBT1Q9UGM3 2413 aaPredicted RBP4.3□□□□□ -1.72
VPS45-213ENST00000618148 ASB16-AS1Q495Z4 193 aa4.29□□□□□ -1.72
VPS45-213ENST00000618148 SIGMAR1Q99720 223 aa4.29□□□□□ -1.72
VPS45-213ENST00000618148 PCLOQ9Y6V0 5065 aa4.28□□□□□ -1.72
VPS45-213ENST00000618148 A0A087WSZ3 146 aa4.28□□□□□ -1.72
VPS45-213ENST00000618148 ACYP1P07311 99 aa4.28□□□□□ -1.72
VPS45-213ENST00000618148 KRTAP3-1Q9BYR8 98 aa4.28□□□□□ -1.72
VPS45-213ENST00000618148 HRCT1Q6UXD1 115 aa4.27□□□□□ -1.73
VPS45-213ENST00000618148 LIMD2Q9BT23 127 aa4.27□□□□□ -1.73
VPS45-213ENST00000618148 SS18L2Q9UHA2 77 aa4.27□□□□□ -1.73
VPS45-213ENST00000618148 LINC00846Q9NV44 126 aa4.26□□□□□ -1.73
VPS45-213ENST00000618148 Q96NJ1 140 aa4.25□□□□□ -1.73
VPS45-213ENST00000618148 LINC00472Q9H8W2 130 aa4.25□□□□□ -1.73
VPS45-213ENST00000618148 C5orf47Q569G3 176 aa4.23□□□□□ -1.73
VPS45-213ENST00000618148 C1orf195Q5TG92 126 aa4.23□□□□□ -1.73
VPS45-213ENST00000618148 Q6ZVQ6 151 aa4.23□□□□□ -1.73
VPS45-213ENST00000618148 NREPQ16612 68 aa4.22□□□□□ -1.73
VPS45-213ENST00000618148 UBL5Q9BZL1 73 aa4.22□□□□□ -1.73
VPS45-213ENST00000618148 J3KT08 172 aa4.2□□□□□ -1.74
VPS45-213ENST00000618148 ATP5EP2Q5VTU8 51 aa4.19□□□□□ -1.74
VPS45-213ENST00000618148 FP248Q71RG6 208 aaPredicted RBP4.19□□□□□ -1.74
VPS45-213ENST00000618148 LINC00643Q86TS7 51 aa4.19□□□□□ -1.74
VPS45-213ENST00000618148 DSCR10P59022 87 aa4.19□□□□□ -1.74
VPS45-213ENST00000618148 CXCL6P80162 114 aa4.19□□□□□ -1.74
VPS45-213ENST00000618148 BPY2O14599 106 aa4.18□□□□□ -1.74
VPS45-213ENST00000618148 A8MWP4 228 aa4.17□□□□□ -1.74
VPS45-213ENST00000618148 IGKV4-1P06312 121 aa4.17□□□□□ -1.74
VPS45-213ENST00000618148 RETNLBQ9BQ08 111 aa4.17□□□□□ -1.74
VPS45-213ENST00000618148 DEFB116Q30KQ4 102 aa4.16□□□□□ -1.74
VPS45-213ENST00000618148 IGKV3D-7A0A0C4DH55 119 aa4.16□□□□□ -1.74
VPS45-213ENST00000618148 A0A1B0GVX0 72 aa4.15□□□□□ -1.75
VPS45-213ENST00000618148 PRR15Q8IV56 129 aa4.15□□□□□ -1.75
VPS45-213ENST00000618148 K7EQZ3 153 aa4.14□□□□□ -1.75
VPS45-213ENST00000618148 HERC1Q15751 4861 aa4.14□□□□□ -1.75
VPS45-213ENST00000618148 IGLV7-46A0A075B6I9 117 aa4.13□□□□□ -1.75
VPS45-213ENST00000618148 NDUFB1O75438 58 aa4.13□□□□□ -1.75
VPS45-213ENST00000618148 ANAPC13Q9BS18 74 aa4.13□□□□□ -1.75
VPS45-213ENST00000618148 TPRXLQ17RH7 258 aa4.13□□□□□ -1.75
VPS45-213ENST00000618148 KRTAP13-3Q3SY46 172 aa4.13□□□□□ -1.75
VPS45-213ENST00000618148 Q8N9L7 120 aa4.13□□□□□ -1.75
VPS45-213ENST00000618148 C8orf87E5RJ46 101 aa4.12□□□□□ -1.75
VPS45-213ENST00000618148 SMIM20Q8N5G0 67 aa4.12□□□□□ -1.75
VPS45-213ENST00000618148 IMUPQ9GZP8 106 aa4.12□□□□□ -1.75
VPS45-213ENST00000618148 MT-ATP8P03928 68 aa4.11□□□□□ -1.75
VPS45-213ENST00000618148 IGHV6-1A0A0B4J1U7 121 aa4.1□□□□□ -1.75
VPS45-213ENST00000618148 MMP24-AS1A0A0U1RRL7 71 aa4.1□□□□□ -1.75
VPS45-213ENST00000618148 KRTAP16-1A8MUX0 517 aa4.1□□□□□ -1.75
VPS45-213ENST00000618148 PRR4Q16378 134 aa4.1□□□□□ -1.75
VPS45-213ENST00000618148 NOTCH2NLQ7Z3S9 236 aa4.1□□□□□ -1.75
VPS45-213ENST00000618148 C8orf17Q9NRJ1 99 aa4.1□□□□□ -1.75
VPS45-213ENST00000618148 HMCN2Q8NDA2 5059 aa4.09□□□□□ -1.75
VPS45-213ENST00000618148 LINC00313P59037 77 aa4.09□□□□□ -1.76
VPS45-213ENST00000618148 RPS28P62857 69 aaKnown RBP4.08□□□□□ -1.76
VPS45-213ENST00000618148 KRTAP23-1A1A580 65 aa4.07□□□□□ -1.76
VPS45-213ENST00000618148 HCG22E2RYF7 251 aa4.07□□□□□ -1.76
VPS45-213ENST00000618148 A0A087WVE0 104 aa4.06□□□□□ -1.76
VPS45-213ENST00000618148 hDV103S1A0JD37 113 aa4.06□□□□□ -1.76
VPS45-213ENST00000618148 HIST1H4AP62805 103 aaKnown RBP4.06□□□□□ -1.76
VPS45-213ENST00000618148 TMEM254Q8TBM7 123 aa4.06□□□□□ -1.76
VPS45-213ENST00000618148 C20orf166-AS1Q96NR2 134 aa4.06□□□□□ -1.76
VPS45-213ENST00000618148 A0A0A0MQY5 61 aa4.06□□□□□ -1.76
VPS45-213ENST00000618148 C9orf92A6NGG3 77 aa4.06□□□□□ -1.76
VPS45-213ENST00000618148 A8MUU9 505 aa4.06□□□□□ -1.76
VPS45-213ENST00000618148 CASC2Q6XLA1 102 aa4.06□□□□□ -1.76
VPS45-213ENST00000618148 Q8N9P0 234 aaPredicted RBP4.06□□□□□ -1.76
VPS45-213ENST00000618148 Q75L30 129 aa4.04□□□□□ -1.76
VPS45-213ENST00000618148 MRPL34Q9BQ48 92 aaKnown RBP4.04□□□□□ -1.76
VPS45-213ENST00000618148 WFDC13Q8IUB5 93 aa4.03□□□□□ -1.76
VPS45-213ENST00000618148 LPAP08519 4548 aa4.03□□□□□ -1.76
VPS45-213ENST00000618148 LRP2P98164 4655 aa4.02□□□□□ -1.77
VPS45-213ENST00000618148 RPL37P61927 97 aaKnown RBP4.02□□□□□ -1.77
VPS45-213ENST00000618148 FAM236AA0A1B0GUQ0 79 aa4□□□□□ -1.77
VPS45-213ENST00000618148 FAM236BA0A1B0GV22 79 aa4□□□□□ -1.77
VPS45-213ENST00000618148 OCR1Q9BZK8 76 aa4□□□□□ -1.77
VPS45-213ENST00000618148 TP53AIP1Q9HCN2 124 aa3.99□□□□□ -1.77
VPS45-213ENST00000618148 PRO0628Q9UI54 55 aa3.97□□□□□ -1.77
VPS45-213ENST00000618148 ATOX1O00244 68 aa3.97□□□□□ -1.77
VPS45-213ENST00000618148 UQCRQO14949 82 aa3.97□□□□□ -1.77
VPS45-213ENST00000618148 ZCCHC13Q8WW36 166 aaKnown RBP3.97□□□□□ -1.77
VPS45-213ENST00000618148 CCDC179H3BU77 68 aa3.96□□□□□ -1.78
VPS45-213ENST00000618148 NDUFS5O43920 106 aa3.96□□□□□ -1.78
VPS45-213ENST00000618148 SEC61GP60059 68 aa3.96□□□□□ -1.78
VPS45-213ENST00000618148 Q5W150 140 aa3.96□□□□□ -1.78
VPS45-213ENST00000618148 MUC17Q685J3 4493 aa3.96□□□□□ -1.78
VPS45-213ENST00000618148 SEC61BP60468 96 aaKnown RBP3.95□□□□□ -1.78
VPS45-213ENST00000618148 TMEM258P61165 79 aa3.94□□□□□ -1.78
VPS45-213ENST00000618148 ATP11AUNQ6ZP68 121 aa3.94□□□□□ -1.78
VPS45-213ENST00000618148 V9GYY9 64 aa3.94□□□□□ -1.78
VPS45-213ENST00000618148 TRAV7A0A075B6U4 112 aa3.94□□□□□ -1.78
VPS45-213ENST00000618148 TRAV22A0A0B4J277 110 aa3.94□□□□□ -1.78
VPS45-213ENST00000618148 PCOTHQ58A44 107 aa3.94□□□□□ -1.78
VPS45-213ENST00000618148 UBR4Q5T4S7 5183 aa3.92□□□□□ -1.78
VPS45-213ENST00000618148 SERP2Q8N6R1 65 aa3.91□□□□□ -1.78
VPS45-213ENST00000618148 KRTAP15-1Q3LI76 137 aa3.9□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms