RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 LINC00308Q8TCZ7 52 aa5.24□□□□□ -1.57
GPC6-202ENST00000617456 ORMDL1Q9P0S3 153 aa5.24□□□□□ -1.57
GPC6-202ENST00000617456 BPY2O14599 106 aa5.23□□□□□ -1.57
GPC6-202ENST00000617456 MIR7-3HGQ8N6C7 128 aa5.23□□□□□ -1.57
GPC6-202ENST00000617456 ZNF706Q9Y5V0 76 aaPredicted RBP5.23□□□□□ -1.57
GPC6-202ENST00000617456 IGLV4-3A0A075B6K6 122 aa5.22□□□□□ -1.57
GPC6-202ENST00000617456 A0A1W2PNN7 141 aa5.22□□□□□ -1.57
GPC6-202ENST00000617456 NDUFB1O75438 58 aa5.22□□□□□ -1.57
GPC6-202ENST00000617456 RNASE13Q5GAN3 156 aaKnown RBP5.22□□□□□ -1.57
GPC6-202ENST00000617456 C9orf129Q5T035 196 aaKnown RBP5.22□□□□□ -1.57
GPC6-202ENST00000617456 LINC00242Q5T6M2 205 aa5.22□□□□□ -1.57
GPC6-202ENST00000617456 MUC2Q02817 5179 aa5.21□□□□□ -1.57
GPC6-202ENST00000617456 CASC2Q6XLA1 102 aa5.2□□□□□ -1.58
GPC6-202ENST00000617456 SPANXA2-OT1Q8N9U9 137 aa5.2□□□□□ -1.58
GPC6-202ENST00000617456 XAGE1AQ9HD64 81 aa5.2□□□□□ -1.58
GPC6-202ENST00000617456 PSORS1C2Q9UIG4 136 aa5.2□□□□□ -1.58
GPC6-202ENST00000617456 A6NED7 52 aa5.19□□□□□ -1.58
GPC6-202ENST00000617456 Q8IZM0 81 aa5.19□□□□□ -1.58
GPC6-202ENST00000617456 C6orf48Q9UBA6 75 aa5.19□□□□□ -1.58
GPC6-202ENST00000617456 KRTAP9-6A0A140TA67 174 aa5.18□□□□□ -1.58
GPC6-202ENST00000617456 NCR3O14931 201 aa5.18□□□□□ -1.58
GPC6-202ENST00000617456 UNQ6190/PRO20217Q6UXQ8 127 aa5.18□□□□□ -1.58
GPC6-202ENST00000617456 Q6ZQT0 140 aa5.18□□□□□ -1.58
GPC6-202ENST00000617456 IGLV5-45A0A087WSX0 123 aa5.17□□□□□ -1.58
GPC6-202ENST00000617456 IGLV7-43P04211 117 aa5.17□□□□□ -1.58
GPC6-202ENST00000617456 PRR4Q16378 134 aa5.17□□□□□ -1.58
GPC6-202ENST00000617456 C1orf137Q5JT78 98 aa5.17□□□□□ -1.58
GPC6-202ENST00000617456 C10orf25Q5T742 122 aa5.17□□□□□ -1.58
GPC6-202ENST00000617456 RETNLBQ9BQ08 111 aa5.16□□□□□ -1.58
GPC6-202ENST00000617456 IGLV5-39A0A0G2JS06 123 aa5.15□□□□□ -1.59
GPC6-202ENST00000617456 PRR15LQ9BU68 103 aa5.15□□□□□ -1.59
GPC6-202ENST00000617456 LINC01558Q9Y6Z2 57 aa5.15□□□□□ -1.59
GPC6-202ENST00000617456 IGLV1-50A0A075B6I6 118 aa5.14□□□□□ -1.59
GPC6-202ENST00000617456 SEC61BP60468 96 aaKnown RBP5.14□□□□□ -1.59
GPC6-202ENST00000617456 FAT4Q6V0I7 4981 aa5.14□□□□□ -1.59
GPC6-202ENST00000617456 KRTAP7-1Q8IUC3 87 aa5.13□□□□□ -1.59
GPC6-202ENST00000617456 HIGD2AQ9BW72 106 aa5.13□□□□□ -1.59
GPC6-202ENST00000617456 CDKN2A-AS1Q9UH64 79 aa5.13□□□□□ -1.59
GPC6-202ENST00000617456 FAM168BA1KXE4 195 aa5.12□□□□□ -1.59
GPC6-202ENST00000617456 ZNF861PO60384 105 aa5.11□□□□□ -1.59
GPC6-202ENST00000617456 SMIM11BQ8TCY0 68 aa5.11□□□□□ -1.59
GPC6-202ENST00000617456 TOMM7Q9P0U1 55 aa5.11□□□□□ -1.59
GPC6-202ENST00000617456 SMIM1B2RUZ4 78 aa5.1□□□□□ -1.59
GPC6-202ENST00000617456 LINC00208Q96KT6 92 aa5.1□□□□□ -1.59
GPC6-202ENST00000617456 SND1-IT1Q9HBX3 110 aa5.1□□□□□ -1.59
GPC6-202ENST00000617456 IGLV5-37A0A075B6J1 123 aa5.09□□□□□ -1.59
GPC6-202ENST00000617456 H3BPC8 53 aa5.09□□□□□ -1.59
GPC6-202ENST00000617456 KRTAP1-4P0C5Y4 121 aa5.09□□□□□ -1.59
GPC6-202ENST00000617456 COX17Q14061 63 aa5.09□□□□□ -1.59
GPC6-202ENST00000617456 KRTAP11-1Q8IUC1 163 aa5.09□□□□□ -1.59
GPC6-202ENST00000617456 COX7B2Q8TF08 81 aa5.09□□□□□ -1.59
GPC6-202ENST00000617456 PRAC1Q96KF2 57 aa5.09□□□□□ -1.59
GPC6-202ENST00000617456 IGKV4-1P06312 121 aa5.08□□□□□ -1.6
GPC6-202ENST00000617456 ROMO1P60602 79 aa5.08□□□□□ -1.6
GPC6-202ENST00000617456 IGKV2-28A0A075B6P5 120 aa5.07□□□□□ -1.6
GPC6-202ENST00000617456 IGKV2D-28P01615 120 aa5.07□□□□□ -1.6
GPC6-202ENST00000617456 KCNQ1DNQ9H478 68 aa5.05□□□□□ -1.6
GPC6-202ENST00000617456 ETDCA0A1B0GVM5 59 aa5.04□□□□□ -1.6
GPC6-202ENST00000617456 A0A1W2PNM2 257 aa5.04□□□□□ -1.6
GPC6-202ENST00000617456 KRTAP23-1A1A580 65 aa5.03□□□□□ -1.6
GPC6-202ENST00000617456 KRTAP16-1A8MUX0 517 aa5.02□□□□□ -1.61
GPC6-202ENST00000617456 KRTAP13-1Q8IUC0 172 aa5.02□□□□□ -1.61
GPC6-202ENST00000617456 Q8NDZ9 215 aa5.01□□□□□ -1.61
GPC6-202ENST00000617456 FSIP2Q5CZC0 6907 aa5□□□□□ -1.61
GPC6-202ENST00000617456 A0A087WSZ3 146 aa4.99□□□□□ -1.61
GPC6-202ENST00000617456 RPL37AP8A6NKH3 93 aa4.99□□□□□ -1.61
GPC6-202ENST00000617456 ADM2Q7Z4H4 148 aa4.98□□□□□ -1.61
GPC6-202ENST00000617456 TYMSOSQ8TAI1 123 aa4.98□□□□□ -1.61
GPC6-202ENST00000617456 MUC17Q685J3 4493 aa4.97□□□□□ -1.61
GPC6-202ENST00000617456 COX7BP24311 80 aa4.96□□□□□ -1.62
GPC6-202ENST00000617456 LINC00575Q6W349 94 aa4.96□□□□□ -1.62
GPC6-202ENST00000617456 ANAPC11Q9NYG5 84 aa4.96□□□□□ -1.62
GPC6-202ENST00000617456 SPINK7P58062 85 aa4.95□□□□□ -1.62
GPC6-202ENST00000617456 SPATA8Q6RVD6 105 aa4.95□□□□□ -1.62
GPC6-202ENST00000617456 IGLV7-46A0A075B6I9 117 aa4.94□□□□□ -1.62
GPC6-202ENST00000617456 LINC00158P58513 81 aa4.94□□□□□ -1.62
GPC6-202ENST00000617456 CSAG1Q6PB30 78 aa4.94□□□□□ -1.62
GPC6-202ENST00000617456 SPAG11AQ6PDA7 123 aa4.94□□□□□ -1.62
GPC6-202ENST00000617456 H0Y9P7 68 aa4.93□□□□□ -1.62
GPC6-202ENST00000617456 KRTAP13-2Q52LG2 175 aa4.93□□□□□ -1.62
GPC6-202ENST00000617456 COA5Q86WW8 74 aa4.93□□□□□ -1.62
GPC6-202ENST00000617456 LINC00304Q8N9R0 145 aa4.93□□□□□ -1.62
GPC6-202ENST00000617456 IGLV9-49A0A0B4J1Y8 123 aa4.92□□□□□ -1.62
GPC6-202ENST00000617456 SPRR1AP35321 89 aa4.92□□□□□ -1.62
GPC6-202ENST00000617456 MIR22HGQ0VDD5 57 aa4.92□□□□□ -1.62
GPC6-202ENST00000617456 CRCT1Q9UGL9 99 aa4.92□□□□□ -1.62
GPC6-202ENST00000617456 PRLHP81277 87 aa4.91□□□□□ -1.62
GPC6-202ENST00000617456 TPRXLQ17RH7 258 aa4.91□□□□□ -1.62
GPC6-202ENST00000617456 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.91□□□□□ -1.62
GPC6-202ENST00000617456 SMIM29Q86T20 159 aa4.91□□□□□ -1.62
GPC6-202ENST00000617456 KRTAP4-16G5E9R7 235 aaPredicted RBP4.9□□□□□ -1.63
GPC6-202ENST00000617456 SPRR4Q96PI1 79 aa4.9□□□□□ -1.63
GPC6-202ENST00000617456 SPINK1P00995 79 aa4.87□□□□□ -1.63
GPC6-202ENST00000617456 P0C880 135 aa4.87□□□□□ -1.63
GPC6-202ENST00000617456 RPS29P62273 56 aaKnown RBP4.87□□□□□ -1.63
GPC6-202ENST00000617456 LINC00483Q53H64 154 aa4.87□□□□□ -1.63
GPC6-202ENST00000617456 KRTAP25-1Q3LHN0 102 aa4.86□□□□□ -1.63
GPC6-202ENST00000617456 SSBP3-AS1Q7Z2R9 100 aa4.86□□□□□ -1.63
GPC6-202ENST00000617456 ST20-AS1Q8NBB2 130 aa4.86□□□□□ -1.63
GPC6-202ENST00000617456 IGLV6-57P01721 117 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms