RNA–Protein interactions for RNA: ENST00000616833.5

CLN5-203, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 2,527 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-203ENST00000616833 ATP5EP56381 51 aaPredicted RBP12.77□□□□□ -0.37
CLN5-203ENST00000616833 FP248Q71RG6 208 aaPredicted RBP12.77□□□□□ -0.37
CLN5-203ENST00000616833 TRAV22A0A0B4J277 110 aa12.76□□□□□ -0.37
CLN5-203ENST00000616833 C1orf64Q8NEQ6 169 aa12.75□□□□□ -0.37
CLN5-203ENST00000616833 MPLKIPQ8TAP9 179 aa12.73□□□□□ -0.37
CLN5-203ENST00000616833 PCOTHQ58A44 107 aa12.69□□□□□ -0.38
CLN5-203ENST00000616833 SMR3BP02814 79 aaPredicted RBP12.68□□□□□ -0.38
CLN5-203ENST00000616833 SMIM26A0A096LP01 95 aa12.68□□□□□ -0.38
CLN5-203ENST00000616833 ASB16-AS1Q495Z4 193 aa12.68□□□□□ -0.38
CLN5-203ENST00000616833 SSBP3-AS1Q7Z2R9 100 aa12.68□□□□□ -0.38
CLN5-203ENST00000616833 MRPL34Q9BQ48 92 aaKnown RBP12.66□□□□□ -0.38
CLN5-203ENST00000616833 KRTAP1-4P0C5Y4 121 aa12.65□□□□□ -0.38
CLN5-203ENST00000616833 DYNC1H1Q14204 4646 aaKnown RBP12.65□□□□□ -0.38
CLN5-203ENST00000616833 PLA2G1BP04054 148 aaKnown RBP12.6□□□□□ -0.39
CLN5-203ENST00000616833 RETNLBQ9BQ08 111 aa12.59□□□□□ -0.39
CLN5-203ENST00000616833 FAT1Q14517 4588 aa12.59□□□□□ -0.39
CLN5-203ENST00000616833 CD164Q04900 197 aa12.58□□□□□ -0.4
CLN5-203ENST00000616833 Q5W150 140 aa12.57□□□□□ -0.4
CLN5-203ENST00000616833 C1orf195Q5TG92 126 aa12.56□□□□□ -0.4
CLN5-203ENST00000616833 KMT2CQ8NEZ4 4911 aaKnown RBP12.56□□□□□ -0.4
CLN5-203ENST00000616833 TP53AIP1Q9HCN2 124 aa12.56□□□□□ -0.4
CLN5-203ENST00000616833 H3BPC8 53 aa12.55□□□□□ -0.4
CLN5-203ENST00000616833 CYP4F30PQ9H0H9 118 aa12.53□□□□□ -0.4
CLN5-203ENST00000616833 TYMSOSQ8TAI1 123 aa12.51□□□□□ -0.41
CLN5-203ENST00000616833 PRR26Q8N8Z3 221 aa12.5□□□□□ -0.41
CLN5-203ENST00000616833 RYR2Q92736 4967 aa12.48□□□□□ -0.41
CLN5-203ENST00000616833 LINC00313P59037 77 aa12.48□□□□□ -0.41
CLN5-203ENST00000616833 APOBP04114 4563 aaKnown RBP12.45□□□□□ -0.42
CLN5-203ENST00000616833 C4orf48Q5BLP8 95 aa12.44□□□□□ -0.42
CLN5-203ENST00000616833 LINC00336Q6ZUF6 198 aa12.43□□□□□ -0.42
CLN5-203ENST00000616833 SPANXA2-OT1Q8N9U9 137 aa12.43□□□□□ -0.42
CLN5-203ENST00000616833 A0A1B0GVY2 172 aa12.4□□□□□ -0.42
CLN5-203ENST00000616833 SVIPQ8NHG7 77 aa12.4□□□□□ -0.42
CLN5-203ENST00000616833 IGLV7-46A0A075B6I9 117 aa12.39□□□□□ -0.43
CLN5-203ENST00000616833 PSPHP1O15172 72 aa12.39□□□□□ -0.43
CLN5-203ENST00000616833 C8orf87E5RJ46 101 aa12.38□□□□□ -0.43
CLN5-203ENST00000616833 KRTAP13-3Q3SY46 172 aa12.37□□□□□ -0.43
CLN5-203ENST00000616833 Q8N9P0 234 aaPredicted RBP12.37□□□□□ -0.43
CLN5-203ENST00000616833 LIMD2Q9BT23 127 aa12.36□□□□□ -0.43
CLN5-203ENST00000616833 COA5Q86WW8 74 aa12.35□□□□□ -0.43
CLN5-203ENST00000616833 KRTAP16-1A8MUX0 517 aa12.31□□□□□ -0.44
CLN5-203ENST00000616833 LINC00304Q8N9R0 145 aa12.31□□□□□ -0.44
CLN5-203ENST00000616833 SPINK1P00995 79 aa12.28□□□□□ -0.44
CLN5-203ENST00000616833 BRK1Q8WUW1 75 aa12.28□□□□□ -0.44
CLN5-203ENST00000616833 LOC101927531A0A1B0GV80 90 aa12.28□□□□□ -0.44
CLN5-203ENST00000616833 Q1T7F1 81 aa12.26□□□□□ -0.45
CLN5-203ENST00000616833 A8MUN3 132 aa12.25□□□□□ -0.45
CLN5-203ENST00000616833 KRTAP10-4P60372 401 aaPredicted RBP12.24□□□□□ -0.45
CLN5-203ENST00000616833 HRES1P13985 223 aa12.24□□□□□ -0.45
CLN5-203ENST00000616833 FAM229AH3BQW9 127 aa12.2□□□□□ -0.46
CLN5-203ENST00000616833 RYR3Q15413 4870 aa12.19□□□□□ -0.46
CLN5-203ENST00000616833 IGKV2D-30A0A075B6S6 120 aa12.19□□□□□ -0.46
CLN5-203ENST00000616833 IGKV2-30P06310 120 aa12.19□□□□□ -0.46
CLN5-203ENST00000616833 C9orf92A6NGG3 77 aa12.18□□□□□ -0.46
CLN5-203ENST00000616833 SPAG11AQ6PDA7 123 aa12.16□□□□□ -0.46
CLN5-203ENST00000616833 LRP1Q07954 4544 aaKnown RBP12.14□□□□□ -0.47
CLN5-203ENST00000616833 PKHD1L1Q86WI1 4243 aa12.14□□□□□ -0.47
CLN5-203ENST00000616833 PRR15LQ9BU68 103 aa12.13□□□□□ -0.47
CLN5-203ENST00000616833 Q5VV11 94 aa12.08□□□□□ -0.48
CLN5-203ENST00000616833 A8MU10 97 aa12.07□□□□□ -0.48
CLN5-203ENST00000616833 PRO0628Q9UI54 55 aa12.07□□□□□ -0.48
CLN5-203ENST00000616833 V9GYY9 64 aa12.03□□□□□ -0.48
CLN5-203ENST00000616833 HSPG2P98160 4391 aa12.02□□□□□ -0.49
CLN5-203ENST00000616833 CHKB-CPT1BH3BT56 60 aa12.01□□□□□ -0.49
CLN5-203ENST00000616833 ACYP2P14621 99 aa11.98□□□□□ -0.49
CLN5-203ENST00000616833 FLG2Q5D862 2391 aaPredicted RBP11.98□□□□□ -0.49
CLN5-203ENST00000616833 RPS29P62273 56 aaKnown RBP11.97□□□□□ -0.49
CLN5-203ENST00000616833 DMAC1Q96GE9 116 aa11.97□□□□□ -0.49
CLN5-203ENST00000616833 KRTAP17-1Q9BYP8 105 aa11.95□□□□□ -0.5
CLN5-203ENST00000616833 Q8N1X5 172 aa11.93□□□□□ -0.5
CLN5-203ENST00000616833 Q5VSD8 79 aa11.93□□□□□ -0.5
CLN5-203ENST00000616833 C7orf65Q6ZTY9 151 aa11.91□□□□□ -0.5
CLN5-203ENST00000616833 TNXBP22105 4242 aa11.89□□□□□ -0.51
CLN5-203ENST00000616833 KIAA1109Q2LD37 5005 aa11.89□□□□□ -0.51
CLN5-203ENST00000616833 LINC01558Q9Y6Z2 57 aa11.88□□□□□ -0.51
CLN5-203ENST00000616833 DMBT1Q9UGM3 2413 aaPredicted RBP11.87□□□□□ -0.51
CLN5-203ENST00000616833 RYR1P21817 5038 aa11.86□□□□□ -0.51
CLN5-203ENST00000616833 A6NED7 52 aa11.86□□□□□ -0.51
CLN5-203ENST00000616833 FAT3Q8TDW7 4589 aa11.86□□□□□ -0.51
CLN5-203ENST00000616833 MYCBP2O75592 4640 aa11.83□□□□□ -0.52
CLN5-203ENST00000616833 Q75L30 129 aa11.82□□□□□ -0.52
CLN5-203ENST00000616833 SPINK7P58062 85 aa11.8□□□□□ -0.52
CLN5-203ENST00000616833 A8MUU9 505 aa11.79□□□□□ -0.52
CLN5-203ENST00000616833 C20orf166-AS1Q96NR2 134 aa11.79□□□□□ -0.52
CLN5-203ENST00000616833 EPPK1P58107 5090 aaKnown RBP11.78□□□□□ -0.52
CLN5-203ENST00000616833 LCA10Q71F78 164 aa11.77□□□□□ -0.53
CLN5-203ENST00000616833 KRTAP10-8P60410 259 aa11.73□□□□□ -0.53
CLN5-203ENST00000616833 SPTSSBQ8NFR3 76 aa11.71□□□□□ -0.53
CLN5-203ENST00000616833 A0A1B0GU69 56 aa11.63□□□□□ -0.55
CLN5-203ENST00000616833 KRTAP3-1Q9BYR8 98 aa11.61□□□□□ -0.55
CLN5-203ENST00000616833 CDC42SE1Q9NRR8 79 aa11.56□□□□□ -0.56
CLN5-203ENST00000616833 PMAIP1Q13794 54 aa11.54□□□□□ -0.56
CLN5-203ENST00000616833 MT1HL1P0DM35 61 aa11.51□□□□□ -0.57
CLN5-203ENST00000616833 ATP11AUNQ6ZP68 121 aa11.49□□□□□ -0.57
CLN5-203ENST00000616833 XP32Q5T750 250 aa11.46□□□□□ -0.57
CLN5-203ENST00000616833 LPAP08519 4548 aa11.44□□□□□ -0.58
CLN5-203ENST00000616833 KRTAP4-5Q9BYR2 181 aa11.43□□□□□ -0.58
CLN5-203ENST00000616833 ABCA13Q86UQ4 5058 aa11.4□□□□□ -0.58
CLN5-203ENST00000616833 RPL37P61927 97 aaKnown RBP11.4□□□□□ -0.59
CLN5-203ENST00000616833 LRP2P98164 4655 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms