RNA–Protein interactions for RNA: ENST00000616253.1

AL353770.3-201, humanhuman

TSL 1 (best) BASIC

Gene AL353770.3, Length 1,988 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL353770.3-201ENST00000616253 TRAV7A0A075B6U4 112 aa5.84□□□□□ -1.48
AL353770.3-201ENST00000616253 CDK2AP2O75956 126 aa5.82□□□□□ -1.48
AL353770.3-201ENST00000616253 WFDC13Q8IUB5 93 aa5.82□□□□□ -1.48
AL353770.3-201ENST00000616253 NDUFB1O75438 58 aa5.82□□□□□ -1.48
AL353770.3-201ENST00000616253 KLKP1Q107X0 134 aa5.82□□□□□ -1.48
AL353770.3-201ENST00000616253 C20orf197Q8N268 126 aa5.82□□□□□ -1.48
AL353770.3-201ENST00000616253 TYMSOSQ8TAI1 123 aa5.81□□□□□ -1.48
AL353770.3-201ENST00000616253 HSPG2P98160 4391 aa5.81□□□□□ -1.48
AL353770.3-201ENST00000616253 OCR1Q9BZK8 76 aa5.8□□□□□ -1.48
AL353770.3-201ENST00000616253 PKHD1L1Q86WI1 4243 aa5.8□□□□□ -1.48
AL353770.3-201ENST00000616253 H7BZZ5 65 aa5.8□□□□□ -1.48
AL353770.3-201ENST00000616253 PRR26Q8N8Z3 221 aa5.8□□□□□ -1.48
AL353770.3-201ENST00000616253 MMP24-AS1A0A0U1RRL7 71 aa5.78□□□□□ -1.48
AL353770.3-201ENST00000616253 KRTAP29-1A8MX34 341 aaPredicted RBP5.78□□□□□ -1.48
AL353770.3-201ENST00000616253 ASB16-AS1Q495Z4 193 aa5.78□□□□□ -1.48
AL353770.3-201ENST00000616253 CASC2Q6XLA1 102 aa5.78□□□□□ -1.48
AL353770.3-201ENST00000616253 V9GYY9 64 aa5.78□□□□□ -1.48
AL353770.3-201ENST00000616253 A0A1B0GVX0 72 aa5.78□□□□□ -1.48
AL353770.3-201ENST00000616253 IGHV6-1A0A0B4J1U7 121 aa5.77□□□□□ -1.49
AL353770.3-201ENST00000616253 FAM229AH3BQW9 127 aa5.76□□□□□ -1.49
AL353770.3-201ENST00000616253 C4orf48Q5BLP8 95 aa5.76□□□□□ -1.49
AL353770.3-201ENST00000616253 LIMD2Q9BT23 127 aa5.76□□□□□ -1.49
AL353770.3-201ENST00000616253 SEC61GP60059 68 aa5.76□□□□□ -1.49
AL353770.3-201ENST00000616253 KRTAP4-5Q9BYR2 181 aa5.76□□□□□ -1.49
AL353770.3-201ENST00000616253 C8orf17Q9NRJ1 99 aa5.76□□□□□ -1.49
AL353770.3-201ENST00000616253 hDV103S1A0JD37 113 aa5.75□□□□□ -1.49
AL353770.3-201ENST00000616253 C1orf195Q5TG92 126 aa5.75□□□□□ -1.49
AL353770.3-201ENST00000616253 Q8N1X5 172 aa5.75□□□□□ -1.49
AL353770.3-201ENST00000616253 Q5VSD8 79 aa5.75□□□□□ -1.49
AL353770.3-201ENST00000616253 LINC00304Q8N9R0 145 aa5.75□□□□□ -1.49
AL353770.3-201ENST00000616253 SPINK1P00995 79 aa5.74□□□□□ -1.49
AL353770.3-201ENST00000616253 TMEM254Q8TBM7 123 aa5.73□□□□□ -1.49
AL353770.3-201ENST00000616253 SNURFQ9Y675 71 aa5.73□□□□□ -1.49
AL353770.3-201ENST00000616253 NOTCH2NLQ7Z3S9 236 aa5.73□□□□□ -1.49
AL353770.3-201ENST00000616253 FP248Q71RG6 208 aaPredicted RBP5.72□□□□□ -1.49
AL353770.3-201ENST00000616253 BRK1Q8WUW1 75 aa5.72□□□□□ -1.49
AL353770.3-201ENST00000616253 SPAG11AQ6PDA7 123 aa5.71□□□□□ -1.5
AL353770.3-201ENST00000616253 A0A0U1RQV1 116 aa5.69□□□□□ -1.5
AL353770.3-201ENST00000616253 RPS29P62273 56 aaKnown RBP5.69□□□□□ -1.5
AL353770.3-201ENST00000616253 C8orf87E5RJ46 101 aa5.68□□□□□ -1.5
AL353770.3-201ENST00000616253 MRPL34Q9BQ48 92 aaKnown RBP5.68□□□□□ -1.5
AL353770.3-201ENST00000616253 NDUFS5O43920 106 aa5.67□□□□□ -1.5
AL353770.3-201ENST00000616253 LRP1Q07954 4544 aaKnown RBP5.67□□□□□ -1.5
AL353770.3-201ENST00000616253 TNXBP22105 4242 aa5.66□□□□□ -1.5
AL353770.3-201ENST00000616253 LINC00313P59037 77 aa5.66□□□□□ -1.5
AL353770.3-201ENST00000616253 H0Y9P7 68 aa5.65□□□□□ -1.51
AL353770.3-201ENST00000616253 MP68P56378 58 aa5.65□□□□□ -1.51
AL353770.3-201ENST00000616253 TP53AIP1Q9HCN2 124 aa5.65□□□□□ -1.51
AL353770.3-201ENST00000616253 FAT3Q8TDW7 4589 aa5.64□□□□□ -1.51
AL353770.3-201ENST00000616253 ZCCHC13Q8WW36 166 aaKnown RBP5.64□□□□□ -1.51
AL353770.3-201ENST00000616253 TRAV22A0A0B4J277 110 aa5.63□□□□□ -1.51
AL353770.3-201ENST00000616253 LINC00208Q96KT6 92 aa5.62□□□□□ -1.51
AL353770.3-201ENST00000616253 HERC1Q15751 4861 aa5.61□□□□□ -1.51
AL353770.3-201ENST00000616253 FLG2Q5D862 2391 aaPredicted RBP5.61□□□□□ -1.51
AL353770.3-201ENST00000616253 PMAIP1Q13794 54 aa5.61□□□□□ -1.51
AL353770.3-201ENST00000616253 KRTAP16-1A8MUX0 517 aa5.6□□□□□ -1.51
AL353770.3-201ENST00000616253 H3BPC8 53 aa5.6□□□□□ -1.51
AL353770.3-201ENST00000616253 KRTAP10-8P60410 259 aa5.6□□□□□ -1.51
AL353770.3-201ENST00000616253 MPLKIPQ8TAP9 179 aa5.6□□□□□ -1.51
AL353770.3-201ENST00000616253 C1orf64Q8NEQ6 169 aa5.59□□□□□ -1.51
AL353770.3-201ENST00000616253 RETNLBQ9BQ08 111 aa5.58□□□□□ -1.52
AL353770.3-201ENST00000616253 Q8N9P0 234 aaPredicted RBP5.58□□□□□ -1.52
AL353770.3-201ENST00000616253 MYCBP2O75592 4640 aa5.57□□□□□ -1.52
AL353770.3-201ENST00000616253 DMBT1Q9UGM3 2413 aaPredicted RBP5.57□□□□□ -1.52
AL353770.3-201ENST00000616253 Q1T7F1 81 aa5.57□□□□□ -1.52
AL353770.3-201ENST00000616253 Q5W150 140 aa5.56□□□□□ -1.52
AL353770.3-201ENST00000616253 KRTAP13-3Q3SY46 172 aa5.55□□□□□ -1.52
AL353770.3-201ENST00000616253 C9orf92A6NGG3 77 aa5.53□□□□□ -1.52
AL353770.3-201ENST00000616253 MT1HL1P0DM35 61 aa5.53□□□□□ -1.52
AL353770.3-201ENST00000616253 LOC101927531A0A1B0GV80 90 aa5.51□□□□□ -1.53
AL353770.3-201ENST00000616253 PCOTHQ58A44 107 aa5.51□□□□□ -1.53
AL353770.3-201ENST00000616253 PRR4Q16378 134 aa5.49□□□□□ -1.53
AL353770.3-201ENST00000616253 J3QL48 77 aa5.48□□□□□ -1.53
AL353770.3-201ENST00000616253 CYP4F30PQ9H0H9 118 aa5.48□□□□□ -1.53
AL353770.3-201ENST00000616253 SPANXA2-OT1Q8N9U9 137 aa5.47□□□□□ -1.53
AL353770.3-201ENST00000616253 C20orf166-AS1Q96NR2 134 aa5.46□□□□□ -1.54
AL353770.3-201ENST00000616253 A8MUU9 505 aa5.46□□□□□ -1.54
AL353770.3-201ENST00000616253 IGKV2-30P06310 120 aa5.45□□□□□ -1.54
AL353770.3-201ENST00000616253 IGLV7-46A0A075B6I9 117 aa5.44□□□□□ -1.54
AL353770.3-201ENST00000616253 IGKV2D-30A0A075B6S6 120 aa5.42□□□□□ -1.54
AL353770.3-201ENST00000616253 HMCN2Q8NDA2 5059 aa5.42□□□□□ -1.54
AL353770.3-201ENST00000616253 PSPHP1O15172 72 aa5.41□□□□□ -1.54
AL353770.3-201ENST00000616253 KTN1-AS1Q86SY8 53 aa5.41□□□□□ -1.54
AL353770.3-201ENST00000616253 Q75L30 129 aa5.4□□□□□ -1.54
AL353770.3-201ENST00000616253 HRES1P13985 223 aa5.39□□□□□ -1.55
AL353770.3-201ENST00000616253 UBR4Q5T4S7 5183 aa5.39□□□□□ -1.55
AL353770.3-201ENST00000616253 C7orf65Q6ZTY9 151 aa5.38□□□□□ -1.55
AL353770.3-201ENST00000616253 ATP11AUNQ6ZP68 121 aa5.37□□□□□ -1.55
AL353770.3-201ENST00000616253 A8MUN3 132 aa5.36□□□□□ -1.55
AL353770.3-201ENST00000616253 XP32Q5T750 250 aa5.36□□□□□ -1.55
AL353770.3-201ENST00000616253 Q5VV11 94 aa5.35□□□□□ -1.55
AL353770.3-201ENST00000616253 CHKB-CPT1BH3BT56 60 aa5.34□□□□□ -1.55
AL353770.3-201ENST00000616253 RPL37P61927 97 aaKnown RBP5.34□□□□□ -1.55
AL353770.3-201ENST00000616253 COA5Q86WW8 74 aa5.34□□□□□ -1.55
AL353770.3-201ENST00000616253 RBM12B-AS1Q9P1G2 102 aa5.33□□□□□ -1.56
AL353770.3-201ENST00000616253 DMAC1Q96GE9 116 aa5.32□□□□□ -1.56
AL353770.3-201ENST00000616253 SPINK7P58062 85 aa5.3□□□□□ -1.56
AL353770.3-201ENST00000616253 TPRXLQ17RH7 258 aa5.3□□□□□ -1.56
AL353770.3-201ENST00000616253 PRR15LQ9BU68 103 aa5.29□□□□□ -1.56
AL353770.3-201ENST00000616253 ACYP2P14621 99 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms