RNA–Protein interactions for RNA: ENST00000615517.4

MUC1-227, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 951 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-227ENST00000615517 SNHG12Q9BXW3 62 aa2.93□□□□□ -1.94
MUC1-227ENST00000615517 TTTY13Q9BZ97 58 aa2.93□□□□□ -1.94
MUC1-227ENST00000615517 DEFB116Q30KQ4 102 aa2.92□□□□□ -1.94
MUC1-227ENST00000615517 UQCC3Q6UW78 93 aa2.92□□□□□ -1.94
MUC1-227ENST00000615517 LEPROTL1O95214 131 aa2.91□□□□□ -1.94
MUC1-227ENST00000615517 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.91□□□□□ -1.94
MUC1-227ENST00000615517 PPDPFLQ8WWR9 84 aa2.91□□□□□ -1.94
MUC1-227ENST00000615517 HSPB8Q9UJY1 196 aa2.91□□□□□ -1.94
MUC1-227ENST00000615517 HSBP1O75506 76 aa2.9□□□□□ -1.95
MUC1-227ENST00000615517 KRTAP5-10Q6L8G5 202 aa2.9□□□□□ -1.95
MUC1-227ENST00000615517 TMEM218A2RU14 115 aa2.89□□□□□ -1.95
MUC1-227ENST00000615517 SNAPINO95295 136 aa2.89□□□□□ -1.95
MUC1-227ENST00000615517 VAMP3Q15836 100 aa2.89□□□□□ -1.95
MUC1-227ENST00000615517 MUSTN1Q8IVN3 82 aa2.89□□□□□ -1.95
MUC1-227ENST00000615517 LINC00472Q9H8W2 130 aa2.89□□□□□ -1.95
MUC1-227ENST00000615517 FABP4P15090 132 aa2.88□□□□□ -1.95
MUC1-227ENST00000615517 C3orf79P0CE67 100 aa2.87□□□□□ -1.95
MUC1-227ENST00000615517 IFITM1P13164 125 aa2.87□□□□□ -1.95
MUC1-227ENST00000615517 MT1XP80297 61 aa2.87□□□□□ -1.95
MUC1-227ENST00000615517 C5orf47Q569G3 176 aa2.87□□□□□ -1.95
MUC1-227ENST00000615517 PRAC1Q96KF2 57 aa2.87□□□□□ -1.95
MUC1-227ENST00000615517 A0A1B0GVX0 72 aa2.86□□□□□ -1.95
MUC1-227ENST00000615517 HSBP1L1C9JCN9 74 aa2.86□□□□□ -1.95
MUC1-227ENST00000615517 C8orf87E5RJ46 101 aa2.86□□□□□ -1.95
MUC1-227ENST00000615517 NDUFV3P56181 108 aaKnown RBP2.86□□□□□ -1.95
MUC1-227ENST00000615517 KRTAP12-2P59991 146 aa2.86□□□□□ -1.95
MUC1-227ENST00000615517 KLKP1Q107X0 134 aa2.86□□□□□ -1.95
MUC1-227ENST00000615517 RAB37Q96AX2 223 aa2.85□□□□□ -1.95
MUC1-227ENST00000615517 KRTAP5-7Q6L8G8 165 aa2.84□□□□□ -1.95
MUC1-227ENST00000615517 COPS9Q8WXC6 57 aa2.84□□□□□ -1.95
MUC1-227ENST00000615517 IGKV3D-7A0A0C4DH55 119 aa2.83□□□□□ -1.96
MUC1-227ENST00000615517 H3BMG7 143 aa2.83□□□□□ -1.96
MUC1-227ENST00000615517 SCGB1D4Q6XE38 83 aa2.83□□□□□ -1.96
MUC1-227ENST00000615517 TRBV7-4A0A0J9YYF1 115 aa2.81□□□□□ -1.96
MUC1-227ENST00000615517 YPEL4Q96NS1 127 aa2.81□□□□□ -1.96
MUC1-227ENST00000615517 PRO2289Q9P1D8 64 aa2.81□□□□□ -1.96
MUC1-227ENST00000615517 SYS1-DBNDD2H3BUS1 97 aa2.8□□□□□ -1.96
MUC1-227ENST00000615517 LYRM7Q5U5X0 104 aa2.8□□□□□ -1.96
MUC1-227ENST00000615517 C12orf57Q99622 126 aa2.8□□□□□ -1.96
MUC1-227ENST00000615517 OCR1Q9BZK8 76 aa2.8□□□□□ -1.96
MUC1-227ENST00000615517 CLLU1Q5K131 121 aa2.79□□□□□ -1.96
MUC1-227ENST00000615517 DSCR8Q96T75 97 aa2.79□□□□□ -1.96
MUC1-227ENST00000615517 TRGC2P03986 189 aa2.78□□□□□ -1.96
MUC1-227ENST00000615517 IGKV2-30P06310 120 aa2.78□□□□□ -1.96
MUC1-227ENST00000615517 MT4P47944 62 aa2.78□□□□□ -1.96
MUC1-227ENST00000615517 BVES-AS1Q5T3Y7 98 aa2.78□□□□□ -1.96
MUC1-227ENST00000615517 LINC01545Q5VT33 79 aa2.78□□□□□ -1.96
MUC1-227ENST00000615517 CSAG1Q6PB30 78 aa2.77□□□□□ -1.97
MUC1-227ENST00000615517 LCA10Q71F78 164 aa2.77□□□□□ -1.97
MUC1-227ENST00000615517 ANKRD29Q8N6D5 301 aa2.77□□□□□ -1.97
MUC1-227ENST00000615517 C4orf26Q17RF5 130 aa2.76□□□□□ -1.97
MUC1-227ENST00000615517 PRR15Q8IV56 129 aa2.76□□□□□ -1.97
MUC1-227ENST00000615517 SPRR5A0A1B0GTR4 108 aa2.75□□□□□ -1.97
MUC1-227ENST00000615517 A0A1B0GV72 72 aa2.75□□□□□ -1.97
MUC1-227ENST00000615517 FABP2P12104 132 aa2.75□□□□□ -1.97
MUC1-227ENST00000615517 RBM3P98179 157 aaKnown RBP2.75□□□□□ -1.97
MUC1-227ENST00000615517 C8orf17Q9NRJ1 99 aa2.75□□□□□ -1.97
MUC1-227ENST00000615517 CRIPTQ9P021 101 aa2.75□□□□□ -1.97
MUC1-227ENST00000615517 S4R3F8 94 aa2.75□□□□□ -1.97
MUC1-227ENST00000615517 IGKV2D-30A0A075B6S6 120 aa2.74□□□□□ -1.97
MUC1-227ENST00000615517 CCKP06307 115 aa2.74□□□□□ -1.97
MUC1-227ENST00000615517 KRTAP10-7P60409 375 aaPredicted RBP2.74□□□□□ -1.97
MUC1-227ENST00000615517 TRACP01848 142 aa2.73□□□□□ -1.97
MUC1-227ENST00000615517 KRTAP10-12P60413 245 aa2.72□□□□□ -1.97
MUC1-227ENST00000615517 C2orf91Q6ZV80 131 aa2.72□□□□□ -1.97
MUC1-227ENST00000615517 J3KT08 172 aa2.71□□□□□ -1.98
MUC1-227ENST00000615517 APOC3P02656 99 aa2.71□□□□□ -1.98
MUC1-227ENST00000615517 C7orf65Q6ZTY9 151 aa2.71□□□□□ -1.98
MUC1-227ENST00000615517 SMIM6P0DI80 62 aa2.7□□□□□ -1.98
MUC1-227ENST00000615517 Q5W150 140 aa2.7□□□□□ -1.98
MUC1-227ENST00000615517 H0YGX0 51 aa2.69□□□□□ -1.98
MUC1-227ENST00000615517 NDUFB1O75438 58 aa2.69□□□□□ -1.98
MUC1-227ENST00000615517 SNCGO76070 127 aa2.69□□□□□ -1.98
MUC1-227ENST00000615517 ATOH7Q8N100 152 aa2.69□□□□□ -1.98
MUC1-227ENST00000615517 HIST1H4GQ99525 98 aa2.69□□□□□ -1.98
MUC1-227ENST00000615517 A0A1B0GV90 55 aa2.68□□□□□ -1.98
MUC1-227ENST00000615517 C14orf144Q96I85 54 aa2.68□□□□□ -1.98
MUC1-227ENST00000615517 V9GYY9 64 aa2.68□□□□□ -1.98
MUC1-227ENST00000615517 SVBPQ8N300 66 aa2.67□□□□□ -1.98
MUC1-227ENST00000615517 PLAC4Q8WY50 150 aa2.67□□□□□ -1.98
MUC1-227ENST00000615517 MRPL34Q9BQ48 92 aaKnown RBP2.67□□□□□ -1.98
MUC1-227ENST00000615517 VPS25Q9BRG1 176 aa2.67□□□□□ -1.98
MUC1-227ENST00000615517 MMP24-AS1A0A0U1RRL7 71 aa2.66□□□□□ -1.98
MUC1-227ENST00000615517 A0A1B0GX51 115 aa2.66□□□□□ -1.98
MUC1-227ENST00000615517 TMEM254Q8TBM7 123 aa2.66□□□□□ -1.98
MUC1-227ENST00000615517 NDUFS5O43920 106 aa2.64□□□□□ -1.99
MUC1-227ENST00000615517 KRTDAPP60985 99 aa2.64□□□□□ -1.99
MUC1-227ENST00000615517 CXCL6P80162 114 aa2.64□□□□□ -1.99
MUC1-227ENST00000615517 Q6ZQT0 140 aa2.64□□□□□ -1.99
MUC1-227ENST00000615517 A8MUN3 132 aa2.63□□□□□ -1.99
MUC1-227ENST00000615517 DLEU1O43261 78 aa2.63□□□□□ -1.99
MUC1-227ENST00000615517 KRTAP5-4Q6L8H1 288 aa2.63□□□□□ -1.99
MUC1-227ENST00000615517 KRTAP19-3Q7Z4W3 81 aa2.63□□□□□ -1.99
MUC1-227ENST00000615517 C1orf64Q8NEQ6 169 aa2.63□□□□□ -1.99
MUC1-227ENST00000615517 K7EQZ3 153 aa2.62□□□□□ -1.99
MUC1-227ENST00000615517 ORMDL1Q9P0S3 153 aa2.62□□□□□ -1.99
MUC1-227ENST00000615517 A0A087WVE0 104 aa2.6□□□□□ -1.99
MUC1-227ENST00000615517 hDV103S1A0JD37 113 aa2.6□□□□□ -1.99
MUC1-227ENST00000615517 NDUFAF8A1L188 74 aa2.6□□□□□ -1.99
MUC1-227ENST00000615517 TMEM256-PLSCR3K7ERE1 68 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms