RNA–Protein interactions for RNA: ENST00000614678.1

CPNE3-208, Transcript of copine 3, humanhuman

TSL 1 (best)

Gene CPNE3, Length 4,201 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-208ENST00000614678 SCGB1C2P0DMR2 95 aa3.02□□□□□ -1.93
CPNE3-208ENST00000614678 LST1O00453 97 aa3.01□□□□□ -1.93
CPNE3-208ENST00000614678 DSCR10P59022 87 aa3.01□□□□□ -1.93
CPNE3-208ENST00000614678 LCE2DQ5TA82 110 aaPredicted RBP3.01□□□□□ -1.93
CPNE3-208ENST00000614678 J3KT08 172 aa3.01□□□□□ -1.93
CPNE3-208ENST00000614678 Q6JHZ5 121 aa3.01□□□□□ -1.93
CPNE3-208ENST00000614678 ORMDL1Q9P0S3 153 aa3.01□□□□□ -1.93
CPNE3-208ENST00000614678 SEC61BP60468 96 aaKnown RBP3□□□□□ -1.93
CPNE3-208ENST00000614678 DNAL4O96015 105 aa3□□□□□ -1.93
CPNE3-208ENST00000614678 IMUPQ9GZP8 106 aa3□□□□□ -1.93
CPNE3-208ENST00000614678 UQCRQO14949 82 aa3□□□□□ -1.93
CPNE3-208ENST00000614678 SNCGO76070 127 aa3□□□□□ -1.93
CPNE3-208ENST00000614678 CCKP06307 115 aa3□□□□□ -1.93
CPNE3-208ENST00000614678 RPL37P61927 97 aaKnown RBP3□□□□□ -1.93
CPNE3-208ENST00000614678 FAM236AA0A1B0GUQ0 79 aa2.99□□□□□ -1.93
CPNE3-208ENST00000614678 FAM236BA0A1B0GV22 79 aa2.99□□□□□ -1.93
CPNE3-208ENST00000614678 BAALC-AS2P0C853 105 aa2.99□□□□□ -1.93
CPNE3-208ENST00000614678 MT1HP80294 61 aa2.99□□□□□ -1.93
CPNE3-208ENST00000614678 COX7CP15954 63 aa2.98□□□□□ -1.93
CPNE3-208ENST00000614678 KRTAP9-2Q9BYQ4 174 aa2.98□□□□□ -1.93
CPNE3-208ENST00000614678 USH2AO75445 5202 aa2.98□□□□□ -1.93
CPNE3-208ENST00000614678 TRBV7-4A0A0J9YYF1 115 aa2.98□□□□□ -1.93
CPNE3-208ENST00000614678 COX6CP09669 75 aa2.98□□□□□ -1.93
CPNE3-208ENST00000614678 TMEM256-PLSCR3K7ERE1 68 aa2.97□□□□□ -1.93
CPNE3-208ENST00000614678 TRACP01848 142 aa2.97□□□□□ -1.93
CPNE3-208ENST00000614678 IGKV4-1P06312 121 aa2.97□□□□□ -1.93
CPNE3-208ENST00000614678 LINC00472Q9H8W2 130 aa2.97□□□□□ -1.93
CPNE3-208ENST00000614678 C14orf132Q9NPU4 83 aa2.97□□□□□ -1.93
CPNE3-208ENST00000614678 PRO0628Q9UI54 55 aa2.96□□□□□ -1.94
CPNE3-208ENST00000614678 RBM3P98179 157 aaKnown RBP2.95□□□□□ -1.94
CPNE3-208ENST00000614678 DSCR8Q96T75 97 aa2.95□□□□□ -1.94
CPNE3-208ENST00000614678 IGHV6-1A0A0B4J1U7 121 aa2.95□□□□□ -1.94
CPNE3-208ENST00000614678 V9GYY9 64 aa2.95□□□□□ -1.94
CPNE3-208ENST00000614678 TMEM258P61165 79 aa2.95□□□□□ -1.94
CPNE3-208ENST00000614678 H3BT86 120 aa2.94□□□□□ -1.94
CPNE3-208ENST00000614678 ATXN8Q156A1 80 aa2.94□□□□□ -1.94
CPNE3-208ENST00000614678 Q6ZQT0 140 aa2.94□□□□□ -1.94
CPNE3-208ENST00000614678 A0A0U1RQV1 116 aa2.93□□□□□ -1.94
CPNE3-208ENST00000614678 Q75L30 129 aa2.93□□□□□ -1.94
CPNE3-208ENST00000614678 C20orf166-AS1Q96NR2 134 aa2.93□□□□□ -1.94
CPNE3-208ENST00000614678 A8MUU9 505 aa2.92□□□□□ -1.94
CPNE3-208ENST00000614678 LINC00643Q86TS7 51 aa2.92□□□□□ -1.94
CPNE3-208ENST00000614678 LINC00313P59037 77 aa2.92□□□□□ -1.94
CPNE3-208ENST00000614678 ATP11AUNQ6ZP68 121 aa2.92□□□□□ -1.94
CPNE3-208ENST00000614678 LORP23490 312 aaPredicted RBP2.91□□□□□ -1.94
CPNE3-208ENST00000614678 LYRM7Q5U5X0 104 aa2.91□□□□□ -1.94
CPNE3-208ENST00000614678 Q6ZVQ6 151 aa2.91□□□□□ -1.94
CPNE3-208ENST00000614678 KRTAP10-6P60371 365 aaPredicted RBP2.91□□□□□ -1.94
CPNE3-208ENST00000614678 Q8N9L7 120 aa2.91□□□□□ -1.94
CPNE3-208ENST00000614678 IGKV3D-7A0A0C4DH55 119 aa2.9□□□□□ -1.94
CPNE3-208ENST00000614678 H7BZZ5 65 aa2.9□□□□□ -1.94
CPNE3-208ENST00000614678 ACYP1P07311 99 aa2.9□□□□□ -1.94
CPNE3-208ENST00000614678 COX6B2Q6YFQ2 88 aa2.9□□□□□ -1.94
CPNE3-208ENST00000614678 SERP2Q8N6R1 65 aa2.89□□□□□ -1.95
CPNE3-208ENST00000614678 A0A1B0GVX0 72 aa2.89□□□□□ -1.95
CPNE3-208ENST00000614678 M0R2T5 61 aa2.89□□□□□ -1.95
CPNE3-208ENST00000614678 LOC110117498A0A087WWA1 95 aa2.88□□□□□ -1.95
CPNE3-208ENST00000614678 FAM236DA0A1B0GTK5 79 aa2.88□□□□□ -1.95
CPNE3-208ENST00000614678 ATOX1O00244 68 aa2.88□□□□□ -1.95
CPNE3-208ENST00000614678 FAM236CP0DP71 79 aa2.88□□□□□ -1.95
CPNE3-208ENST00000614678 A0A087WVE0 104 aa2.88□□□□□ -1.95
CPNE3-208ENST00000614678 K7EQZ3 153 aa2.88□□□□□ -1.95
CPNE3-208ENST00000614678 HRES1P13985 223 aa2.87□□□□□ -1.95
CPNE3-208ENST00000614678 JMJD7-PLA2G4BH0Y9G9 81 aa2.86□□□□□ -1.95
CPNE3-208ENST00000614678 LINC00846Q9NV44 126 aa2.86□□□□□ -1.95
CPNE3-208ENST00000614678 SSPOA2VEC9 5147 aa2.86□□□□□ -1.95
CPNE3-208ENST00000614678 BPY2O14599 106 aa2.86□□□□□ -1.95
CPNE3-208ENST00000614678 C8orf17Q9NRJ1 99 aa2.85□□□□□ -1.95
CPNE3-208ENST00000614678 SERP1Q9Y6X1 66 aa2.85□□□□□ -1.95
CPNE3-208ENST00000614678 H3BQ85 93 aa2.85□□□□□ -1.95
CPNE3-208ENST00000614678 KLKP1Q107X0 134 aa2.85□□□□□ -1.95
CPNE3-208ENST00000614678 KRTAP9-8Q9BYQ0 159 aa2.85□□□□□ -1.95
CPNE3-208ENST00000614678 MMP24-AS1A0A0U1RRL7 71 aa2.85□□□□□ -1.95
CPNE3-208ENST00000614678 A8MWP4 228 aa2.85□□□□□ -1.95
CPNE3-208ENST00000614678 NREPQ16612 68 aa2.85□□□□□ -1.95
CPNE3-208ENST00000614678 Q5W150 140 aa2.84□□□□□ -1.95
CPNE3-208ENST00000614678 MPLKIPQ8TAP9 179 aa2.84□□□□□ -1.95
CPNE3-208ENST00000614678 PRR15Q8IV56 129 aa2.83□□□□□ -1.96
CPNE3-208ENST00000614678 KRTAP9-6A0A140TA67 174 aa2.83□□□□□ -1.96
CPNE3-208ENST00000614678 SPINK7P58062 85 aa2.83□□□□□ -1.96
CPNE3-208ENST00000614678 WFDC13Q8IUB5 93 aa2.83□□□□□ -1.96
CPNE3-208ENST00000614678 Q8N9P0 234 aaPredicted RBP2.83□□□□□ -1.96
CPNE3-208ENST00000614678 ZCCHC13Q8WW36 166 aaKnown RBP2.83□□□□□ -1.96
CPNE3-208ENST00000614678 LOC100996750A0A140TA64 210 aa2.82□□□□□ -1.96
CPNE3-208ENST00000614678 KRTAP4-6Q9BYQ5 205 aa2.82□□□□□ -1.96
CPNE3-208ENST00000614678 SMIM26A0A096LP01 95 aa2.81□□□□□ -1.96
CPNE3-208ENST00000614678 KRTAP23-1A1A580 65 aa2.81□□□□□ -1.96
CPNE3-208ENST00000614678 MT1FP04733 61 aa2.81□□□□□ -1.96
CPNE3-208ENST00000614678 C8orf87E5RJ46 101 aa2.8□□□□□ -1.96
CPNE3-208ENST00000614678 PRAC1Q96KF2 57 aa2.8□□□□□ -1.96
CPNE3-208ENST00000614678 NDUFS5O43920 106 aa2.8□□□□□ -1.96
CPNE3-208ENST00000614678 NDUFB1O75438 58 aa2.8□□□□□ -1.96
CPNE3-208ENST00000614678 MT2AP02795 61 aa2.8□□□□□ -1.96
CPNE3-208ENST00000614678 A8MU10 97 aa2.8□□□□□ -1.96
CPNE3-208ENST00000614678 hDV103S1A0JD37 113 aa2.79□□□□□ -1.96
CPNE3-208ENST00000614678 PDE6GP18545 87 aa2.79□□□□□ -1.96
CPNE3-208ENST00000614678 MRPL34Q9BQ48 92 aaKnown RBP2.79□□□□□ -1.96
CPNE3-208ENST00000614678 CRCT1Q9UGL9 99 aa2.79□□□□□ -1.96
CPNE3-208ENST00000614678 IGKV2D-30A0A075B6S6 120 aa2.78□□□□□ -1.96
CPNE3-208ENST00000614678 IGKV2-30P06310 120 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms