RNA–Protein interactions for RNA: ENST00000613642.4

CCL16-206, Transcript of C-C motif chemokine ligand 16, humanhuman

TSL 3

Gene CCL16, Length 687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL16-206ENST00000613642 KRTAP24-1Q3LI83 254 aa3.1□□□□□ -1.91
CCL16-206ENST00000613642 PLCE1Q9P212 2302 aa3.1□□□□□ -1.91
CCL16-206ENST00000613642 ABCA2Q9BZC7 2435 aa3.1□□□□□ -1.91
CCL16-206ENST00000613642 RP1L1Q8IWN7 2480 aaPredicted RBP3.1□□□□□ -1.91
CCL16-206ENST00000613642 HIVEP1P15822 2718 aa3.09□□□□□ -1.91
CCL16-206ENST00000613642 HIVEP3Q5T1R4 2406 aa3.09□□□□□ -1.91
CCL16-206ENST00000613642 A0A1W2PPR1 153 aa3.09□□□□□ -1.91
CCL16-206ENST00000613642 H0YAA0 97 aa3.09□□□□□ -1.91
CCL16-206ENST00000613642 IGFL1Q6UW32 110 aa3.09□□□□□ -1.91
CCL16-206ENST00000613642 AKAP9Q99996 3911 aa3.09□□□□□ -1.91
CCL16-206ENST00000613642 PLAC4Q8WY50 150 aa3.08□□□□□ -1.92
CCL16-206ENST00000613642 NIPBLQ6KC79 2804 aaeCLIP3.08□□□□□ -1.92
CCL16-206ENST00000613642 PRRC2CQ9Y520 2896 aaKnown RBP3.08□□□□□ -1.92
CCL16-206ENST00000613642 LY6EQ16553 131 aa3.07□□□□□ -1.92
CCL16-206ENST00000613642 TPRXLQ17RH7 258 aa3.07□□□□□ -1.92
CCL16-206ENST00000613642 R4GN34 69 aa3.07□□□□□ -1.92
CCL16-206ENST00000613642 DCHS2Q6V1P9 2916 aa3.06□□□□□ -1.92
CCL16-206ENST00000613642 TACC2O95359 2948 aa3.06□□□□□ -1.92
CCL16-206ENST00000613642 MT3P25713 68 aa3.06□□□□□ -1.92
CCL16-206ENST00000613642 SPRR1AP35321 89 aa3.06□□□□□ -1.92
CCL16-206ENST00000613642 UNQ6190/PRO20217Q6UXQ8 127 aa3.05□□□□□ -1.92
CCL16-206ENST00000613642 Q6ZSA8 131 aa3.05□□□□□ -1.92
CCL16-206ENST00000613642 INE1O15225 51 aa3.04□□□□□ -1.92
CCL16-206ENST00000613642 HTN1P15515 57 aa3.04□□□□□ -1.92
CCL16-206ENST00000613642 H1FX-AS1Q4G0G2 97 aa3.04□□□□□ -1.92
CCL16-206ENST00000613642 ANKHD1Q8IWZ3 2542 aaKnown RBP3.04□□□□□ -1.92
CCL16-206ENST00000613642 PKDREJQ9NTG1 2253 aa3.03□□□□□ -1.92
CCL16-206ENST00000613642 KRTAP13-3Q3SY46 172 aa3.03□□□□□ -1.92
CCL16-206ENST00000613642 ALMS1Q8TCU4 4167 aa3.03□□□□□ -1.92
CCL16-206ENST00000613642 CCDC168Q8NDH2 2452 aa3.03□□□□□ -1.92
CCL16-206ENST00000613642 SPG11Q96JI7 2443 aa3.03□□□□□ -1.92
CCL16-206ENST00000613642 TYMSOSQ8TAI1 123 aa3.02□□□□□ -1.93
CCL16-206ENST00000613642 SPACA4Q8TDM5 124 aa3.02□□□□□ -1.93
CCL16-206ENST00000613642 MTORP42345 2549 aa3.02□□□□□ -1.93
CCL16-206ENST00000613642 ZNF469Q96JG9 3925 aaPredicted RBP3.01□□□□□ -1.93
CCL16-206ENST00000613642 H3BUX3 64 aa3.01□□□□□ -1.93
CCL16-206ENST00000613642 KRTAP5-1Q6L8H4 278 aa3.01□□□□□ -1.93
CCL16-206ENST00000613642 DNHD1Q96M86 4753 aa3□□□□□ -1.93
CCL16-206ENST00000613642 RPL37P61927 97 aaKnown RBP3□□□□□ -1.93
CCL16-206ENST00000613642 C14orf177Q52M58 125 aa3□□□□□ -1.93
CCL16-206ENST00000613642 SMR3AQ99954 134 aa3□□□□□ -1.93
CCL16-206ENST00000613642 SPRR1BP22528 89 aa2.99□□□□□ -1.93
CCL16-206ENST00000613642 C10orf99Q6UWK7 81 aa2.98□□□□□ -1.93
CCL16-206ENST00000613642 VPS13CQ709C8 3753 aa2.98□□□□□ -1.93
CCL16-206ENST00000613642 FBN1P35555 2871 aaKnown RBP2.98□□□□□ -1.93
CCL16-206ENST00000613642 MAP1AP78559 2803 aaPredicted RBP2.97□□□□□ -1.93
CCL16-206ENST00000613642 CSPG4Q6UVK1 2322 aa2.97□□□□□ -1.93
CCL16-206ENST00000613642 DEFB130BP0DP73 79 aa2.96□□□□□ -1.94
CCL16-206ENST00000613642 DEFB130AP0DP74 79 aa2.96□□□□□ -1.94
CCL16-206ENST00000613642 Q6ZRN7 208 aaPredicted RBP2.96□□□□□ -1.94
CCL16-206ENST00000613642 NOTCH3Q9UM47 2321 aa2.96□□□□□ -1.94
CCL16-206ENST00000613642 KRTAP10-5P60370 271 aa2.95□□□□□ -1.94
CCL16-206ENST00000613642 ACANP16112 2415 aa2.95□□□□□ -1.94
CCL16-206ENST00000613642 FLNAP21333 2647 aaKnown RBP2.95□□□□□ -1.94
CCL16-206ENST00000613642 ABCA1O95477 2261 aa2.95□□□□□ -1.94
CCL16-206ENST00000613642 NSD1Q96L73 2696 aaPredicted RBP2.95□□□□□ -1.94
CCL16-206ENST00000613642 COL6A5A8TX70 2615 aa2.94□□□□□ -1.94
CCL16-206ENST00000613642 FN1P02751 2386 aaKnown RBP2.94□□□□□ -1.94
CCL16-206ENST00000613642 HIVEP2P31629 2446 aa2.93□□□□□ -1.94
CCL16-206ENST00000613642 JMJD1CQ15652 2540 aa2.93□□□□□ -1.94
CCL16-206ENST00000613642 CUBNO60494 3623 aa2.93□□□□□ -1.94
CCL16-206ENST00000613642 NBEAL1Q6ZS30 2694 aa2.93□□□□□ -1.94
CCL16-206ENST00000613642 LYNX1P0DP58 116 aa2.93□□□□□ -1.94
CCL16-206ENST00000613642 MXRA5Q9NR99 2828 aa2.92□□□□□ -1.94
CCL16-206ENST00000613642 KRTAP5-4Q6L8H1 288 aa2.92□□□□□ -1.94
CCL16-206ENST00000613642 UBE2DNLQ8IWF7 75 aa2.92□□□□□ -1.94
CCL16-206ENST00000613642 NOP10Q9NPE3 64 aaKnown RBP2.92□□□□□ -1.94
CCL16-206ENST00000613642 STAB1Q9NY15 2570 aa2.91□□□□□ -1.94
CCL16-206ENST00000613642 C10orf95Q9H7T3 257 aa2.9□□□□□ -1.95
CCL16-206ENST00000613642 PRO0255Q9UI72 69 aa2.9□□□□□ -1.95
CCL16-206ENST00000613642 ATRQ13535 2644 aa2.9□□□□□ -1.95
CCL16-206ENST00000613642 WNK2Q9Y3S1 2297 aa2.9□□□□□ -1.95
CCL16-206ENST00000613642 K7EIL1 84 aa2.89□□□□□ -1.95
CCL16-206ENST00000613642 PRLHP81277 87 aa2.89□□□□□ -1.95
CCL16-206ENST00000613642 AKAP6Q13023 2319 aa2.89□□□□□ -1.95
CCL16-206ENST00000613642 KRTAP4-4Q9BYR3 166 aa2.89□□□□□ -1.95
CCL16-206ENST00000613642 HRNRQ86YZ3 2850 aaPredicted RBP2.89□□□□□ -1.95
CCL16-206ENST00000613642 WNK1Q9H4A3 2382 aa2.88□□□□□ -1.95
CCL16-206ENST00000613642 MAPK1IP1LQ8NDC0 245 aa2.88□□□□□ -1.95
CCL16-206ENST00000613642 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.88□□□□□ -1.95
CCL16-206ENST00000613642 KRTAP9-6A8MVA2 160 aa2.87□□□□□ -1.95
CCL16-206ENST00000613642 KRTAP5-9P26371 169 aa2.87□□□□□ -1.95
CCL16-206ENST00000613642 KRTAP12-2P59991 146 aa2.87□□□□□ -1.95
CCL16-206ENST00000613642 LELP1Q5T871 98 aa2.87□□□□□ -1.95
CCL16-206ENST00000613642 SONP18583 2426 aaKnown RBP2.85□□□□□ -1.95
CCL16-206ENST00000613642 ANK2Q01484 3957 aa2.85□□□□□ -1.95
CCL16-206ENST00000613642 ZANQ9Y493 2812 aa2.85□□□□□ -1.95
CCL16-206ENST00000613642 BRD3OSQ6XYD6 125 aa2.85□□□□□ -1.95
CCL16-206ENST00000613642 TLN2Q9Y4G6 2542 aa2.84□□□□□ -1.95
CCL16-206ENST00000613642 DEFB136Q30KP8 78 aa2.83□□□□□ -1.96
CCL16-206ENST00000613642 PP632Q6XCG6 107 aa2.83□□□□□ -1.96
CCL16-206ENST00000613642 MEGF8Q7Z7M0 2845 aa2.83□□□□□ -1.96
CCL16-206ENST00000613642 SPINK1P00995 79 aa2.82□□□□□ -1.96
CCL16-206ENST00000613642 ANK3Q12955 4377 aaKnown RBP2.81□□□□□ -1.96
CCL16-206ENST00000613642 PKD1L1Q8TDX9 2849 aa2.81□□□□□ -1.96
CCL16-206ENST00000613642 SVEP1Q4LDE5 3571 aa2.81□□□□□ -1.96
CCL16-206ENST00000613642 TGP01266 2768 aa2.8□□□□□ -1.96
CCL16-206ENST00000613642 KRTAP10-12P60413 245 aa2.79□□□□□ -1.96
CCL16-206ENST00000613642 S4R3F8 94 aa2.78□□□□□ -1.96
CCL16-206ENST00000613642 LCE1FQ5T754 118 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms