RNA–Protein interactions for RNA: ENST00000613228.1

PDE6A-204, Transcript of phosphodiesterase 6A, humanhuman

TSL 5 BASIC

Gene PDE6A, Length 5,398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-204ENST00000613228 PDZD2O15018 2839 aa4.83□□□□□ -1.64
PDE6A-204ENST00000613228 GCN1Q92616 2671 aaKnown RBP4.83□□□□□ -1.64
PDE6A-204ENST00000613228 MGAM2Q2M2H8 2515 aa4.82□□□□□ -1.64
PDE6A-204ENST00000613228 ZZEF1O43149 2961 aa4.81□□□□□ -1.64
PDE6A-204ENST00000613228 FBN2P35556 2912 aa4.81□□□□□ -1.64
PDE6A-204ENST00000613228 BOD1L1Q8NFC6 3051 aa4.81□□□□□ -1.64
PDE6A-204ENST00000613228 MAP1AP78559 2803 aaPredicted RBP4.81□□□□□ -1.64
PDE6A-204ENST00000613228 A0A1B0GVY2 172 aa4.8□□□□□ -1.64
PDE6A-204ENST00000613228 CELSR3Q9NYQ7 3312 aa4.8□□□□□ -1.64
PDE6A-204ENST00000613228 COL12A1Q99715 3063 aa4.8□□□□□ -1.64
PDE6A-204ENST00000613228 COL6A5A8TX70 2615 aa4.79□□□□□ -1.64
PDE6A-204ENST00000613228 ZFHX3Q15911 3703 aa4.77□□□□□ -1.65
PDE6A-204ENST00000613228 MYO15AQ9UKN7 3530 aa4.76□□□□□ -1.65
PDE6A-204ENST00000613228 PLAC4Q8WY50 150 aa4.76□□□□□ -1.65
PDE6A-204ENST00000613228 H0YAA0 97 aa4.75□□□□□ -1.65
PDE6A-204ENST00000613228 NBEAQ8NFP9 2946 aa4.74□□□□□ -1.65
PDE6A-204ENST00000613228 KALRNO60229 2985 aa4.74□□□□□ -1.65
PDE6A-204ENST00000613228 BSNQ9UPA5 3926 aa4.73□□□□□ -1.65
PDE6A-204ENST00000613228 STAB1Q9NY15 2570 aa4.72□□□□□ -1.65
PDE6A-204ENST00000613228 LOC400499M0QZD8 3231 aa4.71□□□□□ -1.66
PDE6A-204ENST00000613228 WDFY3Q8IZQ1 3526 aa4.71□□□□□ -1.66
PDE6A-204ENST00000613228 P0C880 135 aa4.7□□□□□ -1.66
PDE6A-204ENST00000613228 NBEAL2Q6ZNJ1 2754 aa4.7□□□□□ -1.66
PDE6A-204ENST00000613228 TPRXLQ17RH7 258 aa4.68□□□□□ -1.66
PDE6A-204ENST00000613228 R4GN34 69 aa4.68□□□□□ -1.66
PDE6A-204ENST00000613228 NIPBLQ6KC79 2804 aaeCLIP4.67□□□□□ -1.66
PDE6A-204ENST00000613228 C10orf95Q9H7T3 257 aa4.66□□□□□ -1.66
PDE6A-204ENST00000613228 M0R2T5 61 aa4.66□□□□□ -1.66
PDE6A-204ENST00000613228 LCE2DQ5TA82 110 aaPredicted RBP4.66□□□□□ -1.66
PDE6A-204ENST00000613228 DMDP11532 3685 aa4.66□□□□□ -1.66
PDE6A-204ENST00000613228 NOTCH1P46531 2555 aa4.66□□□□□ -1.66
PDE6A-204ENST00000613228 XP32Q5T750 250 aa4.65□□□□□ -1.66
PDE6A-204ENST00000613228 M0QZ58 72 aa4.65□□□□□ -1.66
PDE6A-204ENST00000613228 SPEGQ15772 3267 aa4.65□□□□□ -1.67
PDE6A-204ENST00000613228 KRTAP10-8P60410 259 aa4.64□□□□□ -1.67
PDE6A-204ENST00000613228 TENM4Q6N022 2769 aa4.64□□□□□ -1.67
PDE6A-204ENST00000613228 ZANQ9Y493 2812 aa4.63□□□□□ -1.67
PDE6A-204ENST00000613228 ALMS1Q8TCU4 4167 aa4.63□□□□□ -1.67
PDE6A-204ENST00000613228 CELSR2Q9HCU4 2923 aa4.62□□□□□ -1.67
PDE6A-204ENST00000613228 KRTAP13-3Q3SY46 172 aa4.62□□□□□ -1.67
PDE6A-204ENST00000613228 ZFHX4Q86UP3 3567 aa4.59□□□□□ -1.67
PDE6A-204ENST00000613228 PP632Q6XCG6 107 aa4.58□□□□□ -1.68
PDE6A-204ENST00000613228 TACC2O95359 2948 aa4.57□□□□□ -1.68
PDE6A-204ENST00000613228 OTOGQ6ZRI0 2925 aa4.57□□□□□ -1.68
PDE6A-204ENST00000613228 MXRA5Q9NR99 2828 aa4.57□□□□□ -1.68
PDE6A-204ENST00000613228 HUWE1Q7Z6Z7 4374 aaKnown RBP4.55□□□□□ -1.68
PDE6A-204ENST00000613228 NBEAL1Q6ZS30 2694 aa4.55□□□□□ -1.68
PDE6A-204ENST00000613228 DCHS2Q6V1P9 2916 aa4.55□□□□□ -1.68
PDE6A-204ENST00000613228 KRTAP15-1Q3LI76 137 aa4.54□□□□□ -1.68
PDE6A-204ENST00000613228 ASPMQ8IZT6 3477 aa4.54□□□□□ -1.68
PDE6A-204ENST00000613228 RELNP78509 3460 aa4.52□□□□□ -1.69
PDE6A-204ENST00000613228 ASH1LQ9NR48 2969 aaKnown RBP4.5□□□□□ -1.69
PDE6A-204ENST00000613228 DCHS1Q96JQ0 3298 aa4.49□□□□□ -1.69
PDE6A-204ENST00000613228 LAMA5O15230 3695 aa4.49□□□□□ -1.69
PDE6A-204ENST00000613228 CRYBG3Q68DQ2 2970 aa4.48□□□□□ -1.69
PDE6A-204ENST00000613228 CFAP47Q6ZTR5 3102 aa4.46□□□□□ -1.7
PDE6A-204ENST00000613228 NBPF19A0A087WUL8 3843 aa4.46□□□□□ -1.7
PDE6A-204ENST00000613228 SPENQ96T58 3664 aaKnown RBP4.45□□□□□ -1.7
PDE6A-204ENST00000613228 AKAP9Q99996 3911 aa4.45□□□□□ -1.7
PDE6A-204ENST00000613228 STAB2Q8WWQ8 2551 aa4.44□□□□□ -1.7
PDE6A-204ENST00000613228 SMG1Q96Q15 3661 aaKnown RBP4.43□□□□□ -1.7
PDE6A-204ENST00000613228 MUC3AQ02505 3323 aa4.43□□□□□ -1.7
PDE6A-204ENST00000613228 FLG2Q5D862 2391 aaPredicted RBP4.42□□□□□ -1.7
PDE6A-204ENST00000613228 TENM3Q9P273 2699 aa4.4□□□□□ -1.7
PDE6A-204ENST00000613228 DNAH9Q9NYC9 4486 aa4.39□□□□□ -1.71
PDE6A-204ENST00000613228 KRTAP10-4P60372 401 aaPredicted RBP4.39□□□□□ -1.71
PDE6A-204ENST00000613228 NF1P21359 2839 aa4.39□□□□□ -1.71
PDE6A-204ENST00000613228 CELSR1Q9NYQ6 3014 aa4.39□□□□□ -1.71
PDE6A-204ENST00000613228 TNP1P09430 55 aa4.36□□□□□ -1.71
PDE6A-204ENST00000613228 FBN1P35555 2871 aaKnown RBP4.36□□□□□ -1.71
PDE6A-204ENST00000613228 TENM1Q9UKZ4 2725 aa4.36□□□□□ -1.71
PDE6A-204ENST00000613228 SVEP1Q4LDE5 3571 aa4.34□□□□□ -1.71
PDE6A-204ENST00000613228 INE1O15225 51 aa4.31□□□□□ -1.72
PDE6A-204ENST00000613228 MT1HL1P0DM35 61 aa4.31□□□□□ -1.72
PDE6A-204ENST00000613228 PRO2289Q9P1D8 64 aa4.31□□□□□ -1.72
PDE6A-204ENST00000613228 DNAH6Q9C0G6 4158 aa4.3□□□□□ -1.72
PDE6A-204ENST00000613228 KRTAP12-2P59991 146 aa4.3□□□□□ -1.72
PDE6A-204ENST00000613228 KRTAP3-1Q9BYR8 98 aa4.28□□□□□ -1.72
PDE6A-204ENST00000613228 DNAH3Q8TD57 4116 aa4.28□□□□□ -1.72
PDE6A-204ENST00000613228 CSMD1Q96PZ7 3565 aa4.27□□□□□ -1.73
PDE6A-204ENST00000613228 VWFP04275 2813 aa4.27□□□□□ -1.73
PDE6A-204ENST00000613228 VPS13DQ5THJ4 4388 aa4.26□□□□□ -1.73
PDE6A-204ENST00000613228 DYNC2H1Q8NCM8 4307 aaKnown RBP4.25□□□□□ -1.73
PDE6A-204ENST00000613228 TENM2Q9NT68 2774 aa4.25□□□□□ -1.73
PDE6A-204ENST00000613228 ANK2Q01484 3957 aa4.24□□□□□ -1.73
PDE6A-204ENST00000613228 DNAH10Q8IVF4 4471 aa4.23□□□□□ -1.73
PDE6A-204ENST00000613228 DNAH17Q9UFH2 4485 aa4.23□□□□□ -1.73
PDE6A-204ENST00000613228 KRTAP12-1P59990 96 aa4.23□□□□□ -1.73
PDE6A-204ENST00000613228 TRRAPQ9Y4A5 3859 aa4.23□□□□□ -1.73
PDE6A-204ENST00000613228 DNAH1Q9P2D7 4330 aa4.2□□□□□ -1.74
PDE6A-204ENST00000613228 DNAH2Q9P225 4427 aa4.2□□□□□ -1.74
PDE6A-204ENST00000613228 CSMD2Q7Z408 3487 aa4.19□□□□□ -1.74
PDE6A-204ENST00000613228 DMBT1Q9UGM3 2413 aaPredicted RBP4.18□□□□□ -1.74
PDE6A-204ENST00000613228 KRTAP13-4Q3LI77 160 aa4.18□□□□□ -1.74
PDE6A-204ENST00000613228 ZNF469Q96JG9 3925 aaPredicted RBP4.17□□□□□ -1.74
PDE6A-204ENST00000613228 CUBNO60494 3623 aa4.17□□□□□ -1.74
PDE6A-204ENST00000613228 KRTAP10-10P60014 251 aa4.16□□□□□ -1.74
PDE6A-204ENST00000613228 VPS13CQ709C8 3753 aa4.16□□□□□ -1.74
PDE6A-204ENST00000613228 CMYA5Q8N3K9 4069 aa4.16□□□□□ -1.74
PDE6A-204ENST00000613228 DNAH8Q96JB1 4490 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms