RNA–Protein interactions for RNA: ENST00000612956.4

MYCBP2-212, Transcript of MYC binding protein 2, E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene MYCBP2, Length 1,542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MYCBP2-212ENST00000612956 PKHD1P08F94 4074 aa4.09□□□□□ -1.76
MYCBP2-212ENST00000612956 DYNC1H1Q14204 4646 aaKnown RBP4.08□□□□□ -1.76
MYCBP2-212ENST00000612956 DNAH8Q96JB1 4490 aa4.08□□□□□ -1.76
MYCBP2-212ENST00000612956 IGLV9-49A0A0B4J1Y8 123 aa4.08□□□□□ -1.76
MYCBP2-212ENST00000612956 A0A0G2JQZ4 141 aa4.08□□□□□ -1.76
MYCBP2-212ENST00000612956 FAT2Q9NYQ8 4349 aa4.08□□□□□ -1.76
MYCBP2-212ENST00000612956 A0A1B0GVY2 172 aa4.07□□□□□ -1.76
MYCBP2-212ENST00000612956 MOBPQ13875 183 aa4.07□□□□□ -1.76
MYCBP2-212ENST00000612956 DNAH11Q96DT5 4516 aa4.07□□□□□ -1.76
MYCBP2-212ENST00000612956 Q8N9L7 120 aa4.06□□□□□ -1.76
MYCBP2-212ENST00000612956 HSPG2P98160 4391 aa4.06□□□□□ -1.76
MYCBP2-212ENST00000612956 A8MWP4 228 aa4.05□□□□□ -1.76
MYCBP2-212ENST00000612956 K7EQZ3 153 aa4.05□□□□□ -1.76
MYCBP2-212ENST00000612956 HCG22E2RYF7 251 aa4.05□□□□□ -1.76
MYCBP2-212ENST00000612956 ASB16-AS1Q495Z4 193 aa4.05□□□□□ -1.76
MYCBP2-212ENST00000612956 PRR15Q8IV56 129 aa4.05□□□□□ -1.76
MYCBP2-212ENST00000612956 OCR1Q9BZK8 76 aa4.05□□□□□ -1.76
MYCBP2-212ENST00000612956 HERC1Q15751 4861 aa4.04□□□□□ -1.76
MYCBP2-212ENST00000612956 NDUFB1O75438 58 aa4.04□□□□□ -1.76
MYCBP2-212ENST00000612956 DNAH5Q8TE73 4624 aa4.03□□□□□ -1.76
MYCBP2-212ENST00000612956 KLKP1Q107X0 134 aa4.03□□□□□ -1.76
MYCBP2-212ENST00000612956 Q5XG85 94 aa4.03□□□□□ -1.76
MYCBP2-212ENST00000612956 SPINK6Q6UWN8 80 aa4.03□□□□□ -1.76
MYCBP2-212ENST00000612956 Q96NJ1 140 aa4.03□□□□□ -1.76
MYCBP2-212ENST00000612956 ANAPC11Q9NYG5 84 aa4.03□□□□□ -1.76
MYCBP2-212ENST00000612956 NDUFC1O43677 76 aa4.01□□□□□ -1.77
MYCBP2-212ENST00000612956 KRTAP1-4P0C5Y4 121 aa4.01□□□□□ -1.77
MYCBP2-212ENST00000612956 TMEM258P61165 79 aa4□□□□□ -1.77
MYCBP2-212ENST00000612956 DEFB116Q30KQ4 102 aa4□□□□□ -1.77
MYCBP2-212ENST00000612956 C20orf197Q8N268 126 aa4□□□□□ -1.77
MYCBP2-212ENST00000612956 CDK2AP2O75956 126 aa4□□□□□ -1.77
MYCBP2-212ENST00000612956 KRTAP13-2Q52LG2 175 aa4□□□□□ -1.77
MYCBP2-212ENST00000612956 C5orf47Q569G3 176 aa4□□□□□ -1.77
MYCBP2-212ENST00000612956 HRCT1Q6UXD1 115 aa4□□□□□ -1.77
MYCBP2-212ENST00000612956 CASC2Q6XLA1 102 aa4□□□□□ -1.77
MYCBP2-212ENST00000612956 PKD1P98161 4303 aa3.99□□□□□ -1.77
MYCBP2-212ENST00000612956 A0A087X002 238 aa3.99□□□□□ -1.77
MYCBP2-212ENST00000612956 MMP24-AS1A0A0U1RRL7 71 aa3.99□□□□□ -1.77
MYCBP2-212ENST00000612956 A0A1B0GVX0 72 aa3.99□□□□□ -1.77
MYCBP2-212ENST00000612956 TMEM254Q8TBM7 123 aa3.99□□□□□ -1.77
MYCBP2-212ENST00000612956 LIMD2Q9BT23 127 aa3.99□□□□□ -1.77
MYCBP2-212ENST00000612956 A0A0U1RQV1 116 aa3.98□□□□□ -1.77
MYCBP2-212ENST00000612956 RPS29P62273 56 aaKnown RBP3.98□□□□□ -1.77
MYCBP2-212ENST00000612956 WFDC13Q8IUB5 93 aa3.98□□□□□ -1.77
MYCBP2-212ENST00000612956 C8orf87E5RJ46 101 aa3.97□□□□□ -1.77
MYCBP2-212ENST00000612956 H3BPC8 53 aa3.97□□□□□ -1.77
MYCBP2-212ENST00000612956 KRTAP10-7P60409 375 aaPredicted RBP3.97□□□□□ -1.77
MYCBP2-212ENST00000612956 RPS28P62857 69 aaKnown RBP3.97□□□□□ -1.77
MYCBP2-212ENST00000612956 C8orf17Q9NRJ1 99 aa3.97□□□□□ -1.77
MYCBP2-212ENST00000612956 LRP1BQ9NZR2 4599 aa3.97□□□□□ -1.77
MYCBP2-212ENST00000612956 hDV103S1A0JD37 113 aa3.96□□□□□ -1.78
MYCBP2-212ENST00000612956 SPAG11AQ6PDA7 123 aa3.96□□□□□ -1.78
MYCBP2-212ENST00000612956 TP53AIP1Q9HCN2 124 aa3.96□□□□□ -1.78
MYCBP2-212ENST00000612956 H7BZZ5 65 aa3.95□□□□□ -1.78
MYCBP2-212ENST00000612956 SPINK1P00995 79 aa3.95□□□□□ -1.78
MYCBP2-212ENST00000612956 ATP5EP56381 51 aaPredicted RBP3.95□□□□□ -1.78
MYCBP2-212ENST00000612956 KRTAP10-4P60372 401 aaPredicted RBP3.95□□□□□ -1.78
MYCBP2-212ENST00000612956 TYMSOSQ8TAI1 123 aa3.95□□□□□ -1.78
MYCBP2-212ENST00000612956 CYSTM1Q9H1C7 97 aa3.95□□□□□ -1.78
MYCBP2-212ENST00000612956 MP68P56378 58 aa3.95□□□□□ -1.78
MYCBP2-212ENST00000612956 KRTAP5-11Q6L8G4 156 aa3.95□□□□□ -1.78
MYCBP2-212ENST00000612956 ZCCHC13Q8WW36 166 aaKnown RBP3.95□□□□□ -1.78
MYCBP2-212ENST00000612956 IGHV6-1A0A0B4J1U7 121 aa3.94□□□□□ -1.78
MYCBP2-212ENST00000612956 MRPL34Q9BQ48 92 aaKnown RBP3.94□□□□□ -1.78
MYCBP2-212ENST00000612956 SNURFQ9Y675 71 aa3.94□□□□□ -1.78
MYCBP2-212ENST00000612956 FAM236DA0A1B0GTK5 79 aa3.93□□□□□ -1.78
MYCBP2-212ENST00000612956 SMR3BP02814 79 aaPredicted RBP3.93□□□□□ -1.78
MYCBP2-212ENST00000612956 FAM236CP0DP71 79 aa3.93□□□□□ -1.78
MYCBP2-212ENST00000612956 C1orf195Q5TG92 126 aa3.93□□□□□ -1.78
MYCBP2-212ENST00000612956 APOBP04114 4563 aaKnown RBP3.92□□□□□ -1.78
MYCBP2-212ENST00000612956 LINC00304Q8N9R0 145 aa3.92□□□□□ -1.78
MYCBP2-212ENST00000612956 SRRM2Q9UQ35 2752 aaKnown RBP3.92□□□□□ -1.78
MYCBP2-212ENST00000612956 TRAV22A0A0B4J277 110 aa3.9□□□□□ -1.78
MYCBP2-212ENST00000612956 H0Y9P7 68 aa3.9□□□□□ -1.78
MYCBP2-212ENST00000612956 LINC00313P59037 77 aa3.9□□□□□ -1.79
MYCBP2-212ENST00000612956 PRR26Q8N8Z3 221 aa3.9□□□□□ -1.79
MYCBP2-212ENST00000612956 UBR4Q5T4S7 5183 aa3.89□□□□□ -1.79
MYCBP2-212ENST00000612956 LCE1AQ5T7P2 110 aa3.88□□□□□ -1.79
MYCBP2-212ENST00000612956 LINC00208Q96KT6 92 aa3.88□□□□□ -1.79
MYCBP2-212ENST00000612956 SERP1Q9Y6X1 66 aa3.88□□□□□ -1.79
MYCBP2-212ENST00000612956 DMBT1Q9UGM3 2413 aaPredicted RBP3.87□□□□□ -1.79
MYCBP2-212ENST00000612956 NDUFS5O43920 106 aa3.87□□□□□ -1.79
MYCBP2-212ENST00000612956 NOTCH2NLQ7Z3S9 236 aa3.87□□□□□ -1.79
MYCBP2-212ENST00000612956 Q8N9P0 234 aaPredicted RBP3.87□□□□□ -1.79
MYCBP2-212ENST00000612956 SPANXA2-OT1Q8N9U9 137 aa3.87□□□□□ -1.79
MYCBP2-212ENST00000612956 C1orf64Q8NEQ6 169 aa3.87□□□□□ -1.79
MYCBP2-212ENST00000612956 SEC61BP60468 96 aaKnown RBP3.86□□□□□ -1.79
MYCBP2-212ENST00000612956 Q75L30 129 aa3.86□□□□□ -1.79
MYCBP2-212ENST00000612956 MYCBP2O75592 4640 aa3.86□□□□□ -1.79
MYCBP2-212ENST00000612956 FAT1Q14517 4588 aa3.86□□□□□ -1.79
MYCBP2-212ENST00000612956 VPS13BQ7Z7G8 4022 aa3.86□□□□□ -1.79
MYCBP2-212ENST00000612956 LOC101927531A0A1B0GV80 90 aa3.85□□□□□ -1.79
MYCBP2-212ENST00000612956 CYP4F30PQ9H0H9 118 aa3.85□□□□□ -1.79
MYCBP2-212ENST00000612956 KRTAP16-1A8MUX0 517 aa3.85□□□□□ -1.79
MYCBP2-212ENST00000612956 KRTAP10-6P60371 365 aaPredicted RBP3.85□□□□□ -1.79
MYCBP2-212ENST00000612956 Q5VSD8 79 aa3.85□□□□□ -1.79
MYCBP2-212ENST00000612956 KRTAP13-3Q3SY46 172 aa3.84□□□□□ -1.8
MYCBP2-212ENST00000612956 KRTAP10-8P60410 259 aa3.83□□□□□ -1.8
MYCBP2-212ENST00000612956 MPLKIPQ8TAP9 179 aa3.83□□□□□ -1.8
MYCBP2-212ENST00000612956 PKHD1L1Q86WI1 4243 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms