RNA–Protein interactions for RNA: ENST00000612779.1

HOXA2-202, Transcript of homeobox A2, humanhuman

Gene HOXA2, Length 1,993 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2-202ENST00000612779 Q8N1X5 172 aa11.12□□□□□ -0.63
HOXA2-202ENST00000612779 BRK1Q8WUW1 75 aa11.12□□□□□ -0.63
HOXA2-202ENST00000612779 MPLKIPQ8TAP9 179 aa11.12□□□□□ -0.63
HOXA2-202ENST00000612779 ZCCHC13Q8WW36 166 aaKnown RBP11.12□□□□□ -0.63
HOXA2-202ENST00000612779 KRTAP17-1Q9BYP8 105 aa11.11□□□□□ -0.63
HOXA2-202ENST00000612779 hDV103S1A0JD37 113 aa11.1□□□□□ -0.63
HOXA2-202ENST00000612779 CD164Q04900 197 aa11.1□□□□□ -0.63
HOXA2-202ENST00000612779 HERC2O95714 4834 aa11.09□□□□□ -0.63
HOXA2-202ENST00000612779 Q5VSD8 79 aa11.08□□□□□ -0.64
HOXA2-202ENST00000612779 PKHD1L1Q86WI1 4243 aa11.08□□□□□ -0.64
HOXA2-202ENST00000612779 DSCR10P59022 87 aa11.07□□□□□ -0.64
HOXA2-202ENST00000612779 LINC00472Q9H8W2 130 aa11.07□□□□□ -0.64
HOXA2-202ENST00000612779 PRR26Q8N8Z3 221 aa11.05□□□□□ -0.64
HOXA2-202ENST00000612779 TYMSOSQ8TAI1 123 aa11.03□□□□□ -0.64
HOXA2-202ENST00000612779 Q96NJ1 140 aa11.03□□□□□ -0.64
HOXA2-202ENST00000612779 Q1T7F1 81 aa11.03□□□□□ -0.64
HOXA2-202ENST00000612779 DEFB116Q30KQ4 102 aa11.03□□□□□ -0.64
HOXA2-202ENST00000612779 K7EQZ3 153 aa11.01□□□□□ -0.65
HOXA2-202ENST00000612779 CYP4F30PQ9H0H9 118 aa11.01□□□□□ -0.65
HOXA2-202ENST00000612779 C1orf64Q8NEQ6 169 aa11□□□□□ -0.65
HOXA2-202ENST00000612779 C1orf195Q5TG92 126 aa10.99□□□□□ -0.65
HOXA2-202ENST00000612779 KRTAP4-5Q9BYR2 181 aa10.99□□□□□ -0.65
HOXA2-202ENST00000612779 HCG22E2RYF7 251 aa10.98□□□□□ -0.65
HOXA2-202ENST00000612779 ASB16-AS1Q495Z4 193 aa10.95□□□□□ -0.66
HOXA2-202ENST00000612779 NDUFB1O75438 58 aa10.94□□□□□ -0.66
HOXA2-202ENST00000612779 PRR15Q8IV56 129 aa10.93□□□□□ -0.66
HOXA2-202ENST00000612779 A8MWP4 228 aa10.9□□□□□ -0.66
HOXA2-202ENST00000612779 SPINK1P00995 79 aa10.9□□□□□ -0.66
HOXA2-202ENST00000612779 LINC00304Q8N9R0 145 aa10.9□□□□□ -0.66
HOXA2-202ENST00000612779 C4orf48Q5BLP8 95 aa10.89□□□□□ -0.67
HOXA2-202ENST00000612779 V9GYY9 64 aa10.88□□□□□ -0.67
HOXA2-202ENST00000612779 SPAG11AQ6PDA7 123 aa10.87□□□□□ -0.67
HOXA2-202ENST00000612779 LIMD2Q9BT23 127 aa10.87□□□□□ -0.67
HOXA2-202ENST00000612779 MP68P56378 58 aa10.86□□□□□ -0.67
HOXA2-202ENST00000612779 RPS29P62273 56 aaKnown RBP10.86□□□□□ -0.67
HOXA2-202ENST00000612779 TRAV22A0A0B4J277 110 aa10.85□□□□□ -0.67
HOXA2-202ENST00000612779 KRTAP10-8P60410 259 aa10.84□□□□□ -0.67
HOXA2-202ENST00000612779 KRTAP29-1A8MX34 341 aaPredicted RBP10.83□□□□□ -0.68
HOXA2-202ENST00000612779 H3BPC8 53 aa10.83□□□□□ -0.68
HOXA2-202ENST00000612779 SPANXA2-OT1Q8N9U9 137 aa10.82□□□□□ -0.68
HOXA2-202ENST00000612779 WFDC13Q8IUB5 93 aa10.81□□□□□ -0.68
HOXA2-202ENST00000612779 LRP1Q07954 4544 aaKnown RBP10.8□□□□□ -0.68
HOXA2-202ENST00000612779 A0A1B0GVX0 72 aa10.79□□□□□ -0.68
HOXA2-202ENST00000612779 PRR4Q16378 134 aa10.79□□□□□ -0.68
HOXA2-202ENST00000612779 PSPHP1O15172 72 aa10.78□□□□□ -0.68
HOXA2-202ENST00000612779 ABCA13Q86UQ4 5058 aa10.78□□□□□ -0.68
HOXA2-202ENST00000612779 PCLOQ9Y6V0 5065 aa10.77□□□□□ -0.68
HOXA2-202ENST00000612779 LINC00208Q96KT6 92 aa10.77□□□□□ -0.69
HOXA2-202ENST00000612779 MMP24-AS1A0A0U1RRL7 71 aa10.76□□□□□ -0.69
HOXA2-202ENST00000612779 TNXBP22105 4242 aa10.76□□□□□ -0.69
HOXA2-202ENST00000612779 FAT3Q8TDW7 4589 aa10.75□□□□□ -0.69
HOXA2-202ENST00000612779 FLG2Q5D862 2391 aaPredicted RBP10.75□□□□□ -0.69
HOXA2-202ENST00000612779 IGHV6-1A0A0B4J1U7 121 aa10.74□□□□□ -0.69
HOXA2-202ENST00000612779 H0Y9P7 68 aa10.74□□□□□ -0.69
HOXA2-202ENST00000612779 C8orf17Q9NRJ1 99 aa10.74□□□□□ -0.69
HOXA2-202ENST00000612779 CASC2Q6XLA1 102 aa10.73□□□□□ -0.69
HOXA2-202ENST00000612779 A8MUN3 132 aa10.72□□□□□ -0.69
HOXA2-202ENST00000612779 NOTCH2NLQ7Z3S9 236 aa10.72□□□□□ -0.69
HOXA2-202ENST00000612779 PMAIP1Q13794 54 aa10.72□□□□□ -0.69
HOXA2-202ENST00000612779 MT1HL1P0DM35 61 aa10.71□□□□□ -0.69
HOXA2-202ENST00000612779 SEC61GP60059 68 aa10.7□□□□□ -0.7
HOXA2-202ENST00000612779 Q5VV11 94 aa10.7□□□□□ -0.7
HOXA2-202ENST00000612779 Q8N9P0 234 aaPredicted RBP10.67□□□□□ -0.7
HOXA2-202ENST00000612779 MYCBP2O75592 4640 aa10.65□□□□□ -0.7
HOXA2-202ENST00000612779 C8orf87E5RJ46 101 aa10.64□□□□□ -0.71
HOXA2-202ENST00000612779 LINC00313P59037 77 aa10.6□□□□□ -0.71
HOXA2-202ENST00000612779 RETNLBQ9BQ08 111 aa10.59□□□□□ -0.71
HOXA2-202ENST00000612779 MRPL34Q9BQ48 92 aaKnown RBP10.59□□□□□ -0.71
HOXA2-202ENST00000612779 IGLV7-46A0A075B6I9 117 aa10.58□□□□□ -0.72
HOXA2-202ENST00000612779 J3QL48 77 aa10.57□□□□□ -0.72
HOXA2-202ENST00000612779 LOC101927531A0A1B0GV80 90 aa10.57□□□□□ -0.72
HOXA2-202ENST00000612779 KRTAP16-1A8MUX0 517 aa10.56□□□□□ -0.72
HOXA2-202ENST00000612779 CHKB-CPT1BH3BT56 60 aa10.56□□□□□ -0.72
HOXA2-202ENST00000612779 Q75L30 129 aa10.56□□□□□ -0.72
HOXA2-202ENST00000612779 PRR15LQ9BU68 103 aa10.56□□□□□ -0.72
HOXA2-202ENST00000612779 COA5Q86WW8 74 aa10.55□□□□□ -0.72
HOXA2-202ENST00000612779 DMBT1Q9UGM3 2413 aaPredicted RBP10.55□□□□□ -0.72
HOXA2-202ENST00000612779 A8MU10 97 aa10.53□□□□□ -0.72
HOXA2-202ENST00000612779 TP53AIP1Q9HCN2 124 aa10.52□□□□□ -0.72
HOXA2-202ENST00000612779 NDUFS5O43920 106 aa10.46□□□□□ -0.73
HOXA2-202ENST00000612779 ATP11AUNQ6ZP68 121 aa10.46□□□□□ -0.73
HOXA2-202ENST00000612779 LCA10Q71F78 164 aa10.45□□□□□ -0.74
HOXA2-202ENST00000612779 LINC01558Q9Y6Z2 57 aa10.44□□□□□ -0.74
HOXA2-202ENST00000612779 KTN1-AS1Q86SY8 53 aa10.43□□□□□ -0.74
HOXA2-202ENST00000612779 A6NED7 52 aa10.42□□□□□ -0.74
HOXA2-202ENST00000612779 C9orf92A6NGG3 77 aa10.42□□□□□ -0.74
HOXA2-202ENST00000612779 PCOTHQ58A44 107 aa10.41□□□□□ -0.74
HOXA2-202ENST00000612779 CDC42SE1Q9NRR8 79 aa10.41□□□□□ -0.74
HOXA2-202ENST00000612779 KRTAP13-3Q3SY46 172 aa10.39□□□□□ -0.75
HOXA2-202ENST00000612779 Q5W150 140 aa10.39□□□□□ -0.75
HOXA2-202ENST00000612779 A6NN06 94 aa10.36□□□□□ -0.75
HOXA2-202ENST00000612779 SPTSSBQ8NFR3 76 aa10.35□□□□□ -0.75
HOXA2-202ENST00000612779 C20orf166-AS1Q96NR2 134 aa10.34□□□□□ -0.75
HOXA2-202ENST00000612779 A8MUU9 505 aa10.33□□□□□ -0.76
HOXA2-202ENST00000612779 HERC1Q15751 4861 aa10.32□□□□□ -0.76
HOXA2-202ENST00000612779 HRES1P13985 223 aa10.32□□□□□ -0.76
HOXA2-202ENST00000612779 RBM12B-AS1Q9P1G2 102 aa10.23□□□□□ -0.77
HOXA2-202ENST00000612779 XP32Q5T750 250 aa10.22□□□□□ -0.77
HOXA2-202ENST00000612779 SPINK7P58062 85 aa10.21□□□□□ -0.77
HOXA2-202ENST00000612779 C7orf65Q6ZTY9 151 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms