RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 FAM236BA0A1B0GV22 79 aa5.23□□□□□ -1.57
CCDC47-207ENST00000612558 PCP4P48539 62 aa5.23□□□□□ -1.57
CCDC47-207ENST00000612558 SS18L2Q9UHA2 77 aa5.23□□□□□ -1.57
CCDC47-207ENST00000612558 HSPG2P98160 4391 aa5.23□□□□□ -1.57
CCDC47-207ENST00000612558 RYR1P21817 5038 aa5.22□□□□□ -1.57
CCDC47-207ENST00000612558 DSCR10P59022 87 aa5.21□□□□□ -1.57
CCDC47-207ENST00000612558 LINC00472Q9H8W2 130 aa5.21□□□□□ -1.57
CCDC47-207ENST00000612558 PKHD1L1Q86WI1 4243 aa5.21□□□□□ -1.57
CCDC47-207ENST00000612558 IGKV4-1P06312 121 aa5.21□□□□□ -1.58
CCDC47-207ENST00000612558 DEFB116Q30KQ4 102 aa5.21□□□□□ -1.58
CCDC47-207ENST00000612558 Q8N9L7 120 aa5.21□□□□□ -1.58
CCDC47-207ENST00000612558 J3KT08 172 aa5.2□□□□□ -1.58
CCDC47-207ENST00000612558 TYMSOSQ8TAI1 123 aa5.2□□□□□ -1.58
CCDC47-207ENST00000612558 Q96NJ1 140 aa5.18□□□□□ -1.58
CCDC47-207ENST00000612558 ANAPC13Q9BS18 74 aa5.18□□□□□ -1.58
CCDC47-207ENST00000612558 K7EQZ3 153 aa5.17□□□□□ -1.58
CCDC47-207ENST00000612558 ATOX1O00244 68 aa5.17□□□□□ -1.58
CCDC47-207ENST00000612558 PRR26Q8N8Z3 221 aa5.17□□□□□ -1.58
CCDC47-207ENST00000612558 EPPK1P58107 5090 aaKnown RBP5.17□□□□□ -1.58
CCDC47-207ENST00000612558 A8MWP4 228 aa5.16□□□□□ -1.58
CCDC47-207ENST00000612558 ASB16-AS1Q495Z4 193 aa5.16□□□□□ -1.58
CCDC47-207ENST00000612558 Q5VSD8 79 aa5.16□□□□□ -1.58
CCDC47-207ENST00000612558 Q5XG85 94 aa5.16□□□□□ -1.58
CCDC47-207ENST00000612558 NDUFB1O75438 58 aa5.15□□□□□ -1.59
CCDC47-207ENST00000612558 PRR15Q8IV56 129 aa5.15□□□□□ -1.59
CCDC47-207ENST00000612558 KIAA1109Q2LD37 5005 aa5.15□□□□□ -1.59
CCDC47-207ENST00000612558 SPINK1P00995 79 aa5.14□□□□□ -1.59
CCDC47-207ENST00000612558 SPAG11AQ6PDA7 123 aa5.14□□□□□ -1.59
CCDC47-207ENST00000612558 LIMD2Q9BT23 127 aa5.14□□□□□ -1.59
CCDC47-207ENST00000612558 LINC00304Q8N9R0 145 aa5.13□□□□□ -1.59
CCDC47-207ENST00000612558 HCG22E2RYF7 251 aa5.12□□□□□ -1.59
CCDC47-207ENST00000612558 RPS29P62273 56 aaKnown RBP5.12□□□□□ -1.59
CCDC47-207ENST00000612558 SMIM20Q8N5G0 67 aa5.12□□□□□ -1.59
CCDC47-207ENST00000612558 SERP2Q8N6R1 65 aa5.11□□□□□ -1.59
CCDC47-207ENST00000612558 A0A1B0GVX0 72 aa5.1□□□□□ -1.59
CCDC47-207ENST00000612558 C1orf195Q5TG92 126 aa5.1□□□□□ -1.59
CCDC47-207ENST00000612558 TRAV7A0A075B6U4 112 aa5.09□□□□□ -1.59
CCDC47-207ENST00000612558 COX7CP15954 63 aa5.09□□□□□ -1.59
CCDC47-207ENST00000612558 IGHV6-1A0A0B4J1U7 121 aa5.08□□□□□ -1.6
CCDC47-207ENST00000612558 CASC2Q6XLA1 102 aa5.08□□□□□ -1.6
CCDC47-207ENST00000612558 WFDC13Q8IUB5 93 aa5.08□□□□□ -1.6
CCDC47-207ENST00000612558 TNXBP22105 4242 aa5.08□□□□□ -1.6
CCDC47-207ENST00000612558 MMP24-AS1A0A0U1RRL7 71 aa5.08□□□□□ -1.6
CCDC47-207ENST00000612558 KRTAP29-1A8MX34 341 aaPredicted RBP5.08□□□□□ -1.6
CCDC47-207ENST00000612558 UQCRQO14949 82 aa5.08□□□□□ -1.6
CCDC47-207ENST00000612558 OCR1Q9BZK8 76 aa5.07□□□□□ -1.6
CCDC47-207ENST00000612558 C8orf17Q9NRJ1 99 aa5.07□□□□□ -1.6
CCDC47-207ENST00000612558 hDV103S1A0JD37 113 aa5.06□□□□□ -1.6
CCDC47-207ENST00000612558 CCDC179H3BU77 68 aa5.06□□□□□ -1.6
CCDC47-207ENST00000612558 KRTAP10-8P60410 259 aa5.06□□□□□ -1.6
CCDC47-207ENST00000612558 FLG2Q5D862 2391 aaPredicted RBP5.06□□□□□ -1.6
CCDC47-207ENST00000612558 LRP1Q07954 4544 aaKnown RBP5.05□□□□□ -1.6
CCDC47-207ENST00000612558 FAT3Q8TDW7 4589 aa5.05□□□□□ -1.6
CCDC47-207ENST00000612558 C8orf87E5RJ46 101 aa5.04□□□□□ -1.6
CCDC47-207ENST00000612558 NOTCH2NLQ7Z3S9 236 aa5.04□□□□□ -1.6
CCDC47-207ENST00000612558 LINC00313P59037 77 aa5.02□□□□□ -1.61
CCDC47-207ENST00000612558 TMEM254Q8TBM7 123 aa5.02□□□□□ -1.61
CCDC47-207ENST00000612558 MRPL34Q9BQ48 92 aaKnown RBP5.01□□□□□ -1.61
CCDC47-207ENST00000612558 DMBT1Q9UGM3 2413 aaPredicted RBP5.01□□□□□ -1.61
CCDC47-207ENST00000612558 C5orf47Q569G3 176 aa4.99□□□□□ -1.61
CCDC47-207ENST00000612558 C20orf197Q8N268 126 aa4.99□□□□□ -1.61
CCDC47-207ENST00000612558 TP53AIP1Q9HCN2 124 aa4.99□□□□□ -1.61
CCDC47-207ENST00000612558 BIRC6Q9NR09 4857 aa4.99□□□□□ -1.61
CCDC47-207ENST00000612558 NDUFS5O43920 106 aa4.98□□□□□ -1.61
CCDC47-207ENST00000612558 OXTP01178 125 aa4.98□□□□□ -1.61
CCDC47-207ENST00000612558 MYCBP2O75592 4640 aa4.97□□□□□ -1.61
CCDC47-207ENST00000612558 MT1HL1P0DM35 61 aa4.97□□□□□ -1.61
CCDC47-207ENST00000612558 KLKP1Q107X0 134 aa4.97□□□□□ -1.61
CCDC47-207ENST00000612558 A0A0U1RQV1 116 aa4.95□□□□□ -1.62
CCDC47-207ENST00000612558 KRTAP16-1A8MUX0 517 aa4.95□□□□□ -1.62
CCDC47-207ENST00000612558 MP68P56378 58 aa4.95□□□□□ -1.62
CCDC47-207ENST00000612558 Q8N9P0 234 aaPredicted RBP4.95□□□□□ -1.62
CCDC47-207ENST00000612558 RETNLBQ9BQ08 111 aa4.95□□□□□ -1.62
CCDC47-207ENST00000612558 SNURFQ9Y675 71 aa4.95□□□□□ -1.62
CCDC47-207ENST00000612558 TRAV22A0A0B4J277 110 aa4.94□□□□□ -1.62
CCDC47-207ENST00000612558 CYSTM1Q9H1C7 97 aa4.94□□□□□ -1.62
CCDC47-207ENST00000612558 H0Y9P7 68 aa4.93□□□□□ -1.62
CCDC47-207ENST00000612558 H3BPC8 53 aa4.93□□□□□ -1.62
CCDC47-207ENST00000612558 HERC2O95714 4834 aa4.93□□□□□ -1.62
CCDC47-207ENST00000612558 NDUFC1O43677 76 aa4.92□□□□□ -1.62
CCDC47-207ENST00000612558 FP248Q71RG6 208 aaPredicted RBP4.92□□□□□ -1.62
CCDC47-207ENST00000612558 ZCCHC13Q8WW36 166 aaKnown RBP4.91□□□□□ -1.62
CCDC47-207ENST00000612558 ABCA13Q86UQ4 5058 aa4.91□□□□□ -1.62
CCDC47-207ENST00000612558 LINC00208Q96KT6 92 aa4.91□□□□□ -1.62
CCDC47-207ENST00000612558 H7BZZ5 65 aa4.9□□□□□ -1.63
CCDC47-207ENST00000612558 C1orf64Q8NEQ6 169 aa4.9□□□□□ -1.63
CCDC47-207ENST00000612558 C9orf92A6NGG3 77 aa4.89□□□□□ -1.63
CCDC47-207ENST00000612558 TMEM258P61165 79 aa4.88□□□□□ -1.63
CCDC47-207ENST00000612558 Q5W150 140 aa4.88□□□□□ -1.63
CCDC47-207ENST00000612558 IGLV7-46A0A075B6I9 117 aa4.87□□□□□ -1.63
CCDC47-207ENST00000612558 KRTAP13-3Q3SY46 172 aa4.87□□□□□ -1.63
CCDC47-207ENST00000612558 C20orf166-AS1Q96NR2 134 aa4.87□□□□□ -1.63
CCDC47-207ENST00000612558 A8MUU9 505 aa4.86□□□□□ -1.63
CCDC47-207ENST00000612558 LOC101927531A0A1B0GV80 90 aa4.85□□□□□ -1.63
CCDC47-207ENST00000612558 FAM236DA0A1B0GTK5 79 aa4.82□□□□□ -1.64
CCDC47-207ENST00000612558 FAM236CP0DP71 79 aa4.82□□□□□ -1.64
CCDC47-207ENST00000612558 PRR4Q16378 134 aa4.82□□□□□ -1.64
CCDC47-207ENST00000612558 Q75L30 129 aa4.82□□□□□ -1.64
CCDC47-207ENST00000612558 CYP4F30PQ9H0H9 118 aa4.82□□□□□ -1.64
CCDC47-207ENST00000612558 ATP5EP56381 51 aaPredicted RBP4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms