RNA–Protein interactions for RNA: ENST00000611833.4

NEK3-206, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-206ENST00000611833 KRTAP10-2P60368 255 aa10.18□□□□□ -0.78
NEK3-206ENST00000611833 A0A087X002 238 aa10.17□□□□□ -0.78
NEK3-206ENST00000611833 PSPHP1O15172 72 aa10.17□□□□□ -0.78
NEK3-206ENST00000611833 NOTCH2NLQ7Z3S9 236 aa10.17□□□□□ -0.78
NEK3-206ENST00000611833 DNAH11Q96DT5 4516 aa10.16□□□□□ -0.78
NEK3-206ENST00000611833 ALMS1Q8TCU4 4167 aa10.16□□□□□ -0.78
NEK3-206ENST00000611833 DNAH5Q8TE73 4624 aa10.16□□□□□ -0.78
NEK3-206ENST00000611833 IGLV7-46A0A075B6I9 117 aa10.16□□□□□ -0.78
NEK3-206ENST00000611833 V9GYY9 64 aa10.15□□□□□ -0.79
NEK3-206ENST00000611833 CD164Q04900 197 aa10.12□□□□□ -0.79
NEK3-206ENST00000611833 SSBP3-AS1Q7Z2R9 100 aa10.12□□□□□ -0.79
NEK3-206ENST00000611833 COA5Q86WW8 74 aa10.1□□□□□ -0.79
NEK3-206ENST00000611833 HYDINQ4G0P3 5121 aa10.08□□□□□ -0.8
NEK3-206ENST00000611833 A8MUN3 132 aa10.07□□□□□ -0.8
NEK3-206ENST00000611833 Q8N9P0 234 aaPredicted RBP10.06□□□□□ -0.8
NEK3-206ENST00000611833 PKD1P98161 4303 aa10.05□□□□□ -0.8
NEK3-206ENST00000611833 KRTAP10-1P60331 282 aa10.04□□□□□ -0.8
NEK3-206ENST00000611833 C1orf195Q5TG92 126 aa10.04□□□□□ -0.8
NEK3-206ENST00000611833 Q6ZSA8 131 aa10.04□□□□□ -0.8
NEK3-206ENST00000611833 LIMD2Q9BT23 127 aa10.04□□□□□ -0.8
NEK3-206ENST00000611833 FAT2Q9NYQ8 4349 aa10.02□□□□□ -0.8
NEK3-206ENST00000611833 LRP1BQ9NZR2 4599 aa10.01□□□□□ -0.81
NEK3-206ENST00000611833 LOC101927531A0A1B0GV80 90 aa10.01□□□□□ -0.81
NEK3-206ENST00000611833 C8orf87E5RJ46 101 aa10.01□□□□□ -0.81
NEK3-206ENST00000611833 Q5W150 140 aa10.01□□□□□ -0.81
NEK3-206ENST00000611833 Q5VV11 94 aa9.99□□□□□ -0.81
NEK3-206ENST00000611833 PRR15LQ9BU68 103 aa9.99□□□□□ -0.81
NEK3-206ENST00000611833 KRTAP13-2Q52LG2 175 aa9.98□□□□□ -0.81
NEK3-206ENST00000611833 LINC00313P59037 77 aa9.96□□□□□ -0.81
NEK3-206ENST00000611833 KRTAP13-3Q3SY46 172 aa9.95□□□□□ -0.82
NEK3-206ENST00000611833 CHKB-CPT1BH3BT56 60 aa9.94□□□□□ -0.82
NEK3-206ENST00000611833 HRES1P13985 223 aa9.93□□□□□ -0.82
NEK3-206ENST00000611833 SPAG11AQ6PDA7 123 aa9.9□□□□□ -0.82
NEK3-206ENST00000611833 KRTAP1-4P0C5Y4 121 aa9.89□□□□□ -0.83
NEK3-206ENST00000611833 VPS13BQ7Z7G8 4022 aa9.88□□□□□ -0.83
NEK3-206ENST00000611833 FAM229AH3BQW9 127 aa9.87□□□□□ -0.83
NEK3-206ENST00000611833 RETNLBQ9BQ08 111 aa9.87□□□□□ -0.83
NEK3-206ENST00000611833 Q75L30 129 aa9.86□□□□□ -0.83
NEK3-206ENST00000611833 LINC01558Q9Y6Z2 57 aa9.84□□□□□ -0.83
NEK3-206ENST00000611833 C4orf48Q5BLP8 95 aa9.83□□□□□ -0.84
NEK3-206ENST00000611833 PLA2G1BP04054 148 aaKnown RBP9.83□□□□□ -0.84
NEK3-206ENST00000611833 A6NED7 52 aa9.82□□□□□ -0.84
NEK3-206ENST00000611833 A8MU10 97 aa9.82□□□□□ -0.84
NEK3-206ENST00000611833 ACYP2P14621 99 aa9.81□□□□□ -0.84
NEK3-206ENST00000611833 TYMSOSQ8TAI1 123 aa9.8□□□□□ -0.84
NEK3-206ENST00000611833 KRTAP21-3Q3LHN1 58 aa9.79□□□□□ -0.84
NEK3-206ENST00000611833 KRTAP16-1A8MUX0 517 aa9.78□□□□□ -0.84
NEK3-206ENST00000611833 PRR26Q8N8Z3 221 aa9.78□□□□□ -0.84
NEK3-206ENST00000611833 PKHD1P08F94 4074 aa9.78□□□□□ -0.84
NEK3-206ENST00000611833 IGKV2-30P06310 120 aa9.77□□□□□ -0.85
NEK3-206ENST00000611833 SACSQ9NZJ4 4579 aa9.75□□□□□ -0.85
NEK3-206ENST00000611833 DMAC1Q96GE9 116 aa9.74□□□□□ -0.85
NEK3-206ENST00000611833 SPINK1P00995 79 aa9.74□□□□□ -0.85
NEK3-206ENST00000611833 LCA10Q71F78 164 aa9.73□□□□□ -0.85
NEK3-206ENST00000611833 PMAIP1Q13794 54 aa9.7□□□□□ -0.86
NEK3-206ENST00000611833 SPTSSBQ8NFR3 76 aa9.7□□□□□ -0.86
NEK3-206ENST00000611833 IGKV2D-30A0A075B6S6 120 aa9.69□□□□□ -0.86
NEK3-206ENST00000611833 CDC42SE1Q9NRR8 79 aa9.67□□□□□ -0.86
NEK3-206ENST00000611833 ATP11AUNQ6ZP68 121 aa9.65□□□□□ -0.86
NEK3-206ENST00000611833 SPINK7P58062 85 aa9.65□□□□□ -0.87
NEK3-206ENST00000611833 LINC00304Q8N9R0 145 aa9.65□□□□□ -0.87
NEK3-206ENST00000611833 DYNC1H1Q14204 4646 aaKnown RBP9.62□□□□□ -0.87
NEK3-206ENST00000611833 SMR3BP02814 79 aaPredicted RBP9.62□□□□□ -0.87
NEK3-206ENST00000611833 RPS29P62273 56 aaKnown RBP9.59□□□□□ -0.87
NEK3-206ENST00000611833 C7orf65Q6ZTY9 151 aa9.57□□□□□ -0.88
NEK3-206ENST00000611833 A0A1B0GVY2 172 aa9.56□□□□□ -0.88
NEK3-206ENST00000611833 A0A1B0GU69 56 aa9.54□□□□□ -0.88
NEK3-206ENST00000611833 FAT1Q14517 4588 aa9.52□□□□□ -0.88
NEK3-206ENST00000611833 APOBP04114 4563 aaKnown RBP9.52□□□□□ -0.89
NEK3-206ENST00000611833 KRTAP10-4P60372 401 aaPredicted RBP9.51□□□□□ -0.89
NEK3-206ENST00000611833 A6NN06 94 aa9.47□□□□□ -0.89
NEK3-206ENST00000611833 C9orf92A6NGG3 77 aa9.46□□□□□ -0.9
NEK3-206ENST00000611833 PKHD1L1Q86WI1 4243 aa9.46□□□□□ -0.9
NEK3-206ENST00000611833 KTN1-AS1Q86SY8 53 aa9.44□□□□□ -0.9
NEK3-206ENST00000611833 RYR2Q92736 4967 aa9.44□□□□□ -0.9
NEK3-206ENST00000611833 Q8N1X5 172 aa9.44□□□□□ -0.9
NEK3-206ENST00000611833 A8MUU9 505 aa9.38□□□□□ -0.91
NEK3-206ENST00000611833 C20orf166-AS1Q96NR2 134 aa9.38□□□□□ -0.91
NEK3-206ENST00000611833 KMT2CQ8NEZ4 4911 aaKnown RBP9.36□□□□□ -0.91
NEK3-206ENST00000611833 UQCR11O14957 56 aa9.35□□□□□ -0.91
NEK3-206ENST00000611833 SPATA8Q6RVD6 105 aa9.34□□□□□ -0.91
NEK3-206ENST00000611833 SEC61GP60059 68 aa9.33□□□□□ -0.92
NEK3-206ENST00000611833 MIR22HGQ0VDD5 57 aa9.32□□□□□ -0.92
NEK3-206ENST00000611833 FLG2Q5D862 2391 aaPredicted RBP9.22□□□□□ -0.93
NEK3-206ENST00000611833 KRTAP3-1Q9BYR8 98 aa9.2□□□□□ -0.94
NEK3-206ENST00000611833 RBM12B-AS1Q9P1G2 102 aa9.18□□□□□ -0.94
NEK3-206ENST00000611833 LRP1Q07954 4544 aaKnown RBP9.17□□□□□ -0.94
NEK3-206ENST00000611833 TNXBP22105 4242 aa9.16□□□□□ -0.94
NEK3-206ENST00000611833 HSPG2P98160 4391 aa9.14□□□□□ -0.95
NEK3-206ENST00000611833 FAT3Q8TDW7 4589 aa9.14□□□□□ -0.95
NEK3-206ENST00000611833 KRTAP10-8P60410 259 aa9.13□□□□□ -0.95
NEK3-206ENST00000611833 Q5VSD8 79 aa9.11□□□□□ -0.95
NEK3-206ENST00000611833 COX6B2Q6YFQ2 88 aa9.09□□□□□ -0.95
NEK3-206ENST00000611833 RYR3Q15413 4870 aa9.06□□□□□ -0.96
NEK3-206ENST00000611833 PRAC1Q96KF2 57 aa9.05□□□□□ -0.96
NEK3-206ENST00000611833 ADM2Q7Z4H4 148 aa9.04□□□□□ -0.96
NEK3-206ENST00000611833 A0A1B0GU33 70 aa9.03□□□□□ -0.96
NEK3-206ENST00000611833 KRTAP17-1Q9BYP8 105 aa9.02□□□□□ -0.97
NEK3-206ENST00000611833 RYR1P21817 5038 aa9.02□□□□□ -0.97
NEK3-206ENST00000611833 H0YAA0 97 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 399.7 ms