RNA–Protein interactions for RNA: ENST00000611571.4

MUC1-223, Transcript of mucin 1, cell surface associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MUC1, Length 4,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-223ENST00000611571 LINC00304Q8N9R0 145 aa8.4□□□□□ -1.06
MUC1-223ENST00000611571 Q5VV11 94 aa8.4□□□□□ -1.06
MUC1-223ENST00000611571 CDC42SE1Q9NRR8 79 aa8.39□□□□□ -1.07
MUC1-223ENST00000611571 SRRM2Q9UQ35 2752 aaKnown RBP8.38□□□□□ -1.07
MUC1-223ENST00000611571 SPINK7P58062 85 aa8.36□□□□□ -1.07
MUC1-223ENST00000611571 SPRR1BP22528 89 aa8.34□□□□□ -1.07
MUC1-223ENST00000611571 PRAC1Q96KF2 57 aa8.34□□□□□ -1.07
MUC1-223ENST00000611571 A0A087X002 238 aa8.33□□□□□ -1.08
MUC1-223ENST00000611571 NOTCH2NLQ7Z3S9 236 aa8.33□□□□□ -1.08
MUC1-223ENST00000611571 KRTAP29-1A8MX34 341 aaPredicted RBP8.3□□□□□ -1.08
MUC1-223ENST00000611571 A8MU10 97 aa8.29□□□□□ -1.08
MUC1-223ENST00000611571 Q75L30 129 aa8.29□□□□□ -1.08
MUC1-223ENST00000611571 A0A0D9SG42 100 aa8.29□□□□□ -1.08
MUC1-223ENST00000611571 ZCCHC13Q8WW36 166 aaKnown RBP8.28□□□□□ -1.08
MUC1-223ENST00000611571 PLAC8Q9NZF1 115 aa8.27□□□□□ -1.09
MUC1-223ENST00000611571 RBM12B-AS1Q9P1G2 102 aa8.27□□□□□ -1.09
MUC1-223ENST00000611571 LINC01558Q9Y6Z2 57 aa8.26□□□□□ -1.09
MUC1-223ENST00000611571 Q5W150 140 aa8.26□□□□□ -1.09
MUC1-223ENST00000611571 LCA10Q71F78 164 aa8.25□□□□□ -1.09
MUC1-223ENST00000611571 KRTAP10-2P60368 255 aa8.24□□□□□ -1.09
MUC1-223ENST00000611571 SPINT4Q6UDR6 99 aa8.2□□□□□ -1.1
MUC1-223ENST00000611571 BSNQ9UPA5 3926 aa8.18□□□□□ -1.1
MUC1-223ENST00000611571 CRIPTQ9P021 101 aa8.17□□□□□ -1.1
MUC1-223ENST00000611571 KRTAP10-1P60331 282 aa8.15□□□□□ -1.1
MUC1-223ENST00000611571 LINC01554Q52M75 96 aa8.14□□□□□ -1.11
MUC1-223ENST00000611571 TRRAPQ9Y4A5 3859 aa8.13□□□□□ -1.11
MUC1-223ENST00000611571 A0A1B0GU33 70 aa8.11□□□□□ -1.11
MUC1-223ENST00000611571 VPS13CQ709C8 3753 aa8.09□□□□□ -1.11
MUC1-223ENST00000611571 Q6ZR54 194 aa8.09□□□□□ -1.11
MUC1-223ENST00000611571 LINC00483Q53H64 154 aa8.08□□□□□ -1.12
MUC1-223ENST00000611571 LCE6AA0A183 80 aa8.07□□□□□ -1.12
MUC1-223ENST00000611571 Q6ZRN7 208 aaPredicted RBP8.07□□□□□ -1.12
MUC1-223ENST00000611571 CSAG1Q6PB30 78 aa8.06□□□□□ -1.12
MUC1-223ENST00000611571 FBN3Q75N90 2809 aa8.05□□□□□ -1.12
MUC1-223ENST00000611571 DMAC1Q96GE9 116 aa8.02□□□□□ -1.13
MUC1-223ENST00000611571 KRTAP13-1Q8IUC0 172 aa7.98□□□□□ -1.13
MUC1-223ENST00000611571 ADM2Q7Z4H4 148 aa7.97□□□□□ -1.13
MUC1-223ENST00000611571 SPATA8Q6RVD6 105 aa7.93□□□□□ -1.14
MUC1-223ENST00000611571 COL7A1Q02388 2944 aa7.92□□□□□ -1.14
MUC1-223ENST00000611571 KRTAP13-2Q52LG2 175 aa7.92□□□□□ -1.14
MUC1-223ENST00000611571 COX6B2Q6YFQ2 88 aa7.92□□□□□ -1.14
MUC1-223ENST00000611571 J3QL48 77 aa7.9□□□□□ -1.14
MUC1-223ENST00000611571 A6NN06 94 aa7.86□□□□□ -1.15
MUC1-223ENST00000611571 Q6ZSA8 131 aa7.84□□□□□ -1.15
MUC1-223ENST00000611571 MEGF8Q7Z7M0 2845 aa7.81□□□□□ -1.16
MUC1-223ENST00000611571 H3BS24 57 aa7.8□□□□□ -1.16
MUC1-223ENST00000611571 CSMD3Q7Z407 3707 aa7.8□□□□□ -1.16
MUC1-223ENST00000611571 H1FX-AS1Q4G0G2 97 aa7.75□□□□□ -1.17
MUC1-223ENST00000611571 S4R3F8 94 aa7.75□□□□□ -1.17
MUC1-223ENST00000611571 ZNF469Q96JG9 3925 aaPredicted RBP7.74□□□□□ -1.17
MUC1-223ENST00000611571 Q5VSD8 79 aa7.72□□□□□ -1.17
MUC1-223ENST00000611571 RPL37P61927 97 aaKnown RBP7.71□□□□□ -1.18
MUC1-223ENST00000611571 ASB16-AS1Q495Z4 193 aa7.71□□□□□ -1.18
MUC1-223ENST00000611571 CAMK2N1Q7Z7J9 78 aa7.66□□□□□ -1.18
MUC1-223ENST00000611571 R4GN34 69 aa7.63□□□□□ -1.19
MUC1-223ENST00000611571 ANK3Q12955 4377 aaKnown RBP7.62□□□□□ -1.19
MUC1-223ENST00000611571 ROMO1P60602 79 aa7.62□□□□□ -1.19
MUC1-223ENST00000611571 KRTAP1-4P0C5Y4 121 aa7.58□□□□□ -1.2
MUC1-223ENST00000611571 M0QZ58 72 aa7.56□□□□□ -1.2
MUC1-223ENST00000611571 KRTAP25-1Q3LHN0 102 aa7.51□□□□□ -1.21
MUC1-223ENST00000611571 LUZP6Q538Z0 58 aa7.48□□□□□ -1.21
MUC1-223ENST00000611571 M0R2T5 61 aa7.45□□□□□ -1.22
MUC1-223ENST00000611571 KRTAP16-1A8MUX0 517 aa7.45□□□□□ -1.22
MUC1-223ENST00000611571 A8MUU9 505 aa7.43□□□□□ -1.22
MUC1-223ENST00000611571 H0YAA0 97 aa7.42□□□□□ -1.22
MUC1-223ENST00000611571 RPS29P62273 56 aaKnown RBP7.41□□□□□ -1.22
MUC1-223ENST00000611571 C20orf166-AS1Q96NR2 134 aa7.4□□□□□ -1.22
MUC1-223ENST00000611571 KRTAP13-3Q3SY46 172 aa7.38□□□□□ -1.23
MUC1-223ENST00000611571 C10orf95Q9H7T3 257 aa7.38□□□□□ -1.23
MUC1-223ENST00000611571 SEC61BP60468 96 aaKnown RBP7.37□□□□□ -1.23
MUC1-223ENST00000611571 AKAP9Q99996 3911 aa7.34□□□□□ -1.23
MUC1-223ENST00000611571 NDUFAF8A1L188 74 aa7.32□□□□□ -1.24
MUC1-223ENST00000611571 XP32Q5T750 250 aa7.24□□□□□ -1.25
MUC1-223ENST00000611571 P0C880 135 aa7.23□□□□□ -1.25
MUC1-223ENST00000611571 KRTAP3-1Q9BYR8 98 aa7.09□□□□□ -1.27
MUC1-223ENST00000611571 A0A0A0MQY5 61 aa7.07□□□□□ -1.28
MUC1-223ENST00000611571 HUWE1Q7Z6Z7 4374 aaKnown RBP7.05□□□□□ -1.28
MUC1-223ENST00000611571 A0A1B0GVY2 172 aa7.03□□□□□ -1.28
MUC1-223ENST00000611571 PLAC4Q8WY50 150 aa6.99□□□□□ -1.29
MUC1-223ENST00000611571 KRTAP10-8P60410 259 aa6.98□□□□□ -1.29
MUC1-223ENST00000611571 DNAH10Q8IVF4 4471 aa6.97□□□□□ -1.29
MUC1-223ENST00000611571 KRTAP12-2P59991 146 aa6.93□□□□□ -1.3
MUC1-223ENST00000611571 KRTAP13-4Q3LI77 160 aa6.9□□□□□ -1.31
MUC1-223ENST00000611571 KRTAP21-3Q3LHN1 58 aa6.88□□□□□ -1.31
MUC1-223ENST00000611571 TPRXLQ17RH7 258 aa6.87□□□□□ -1.31
MUC1-223ENST00000611571 PLECQ15149 4684 aaKnown RBP6.86□□□□□ -1.31
MUC1-223ENST00000611571 TNP1P09430 55 aa6.86□□□□□ -1.31
MUC1-223ENST00000611571 DNHD1Q96M86 4753 aa6.85□□□□□ -1.31
MUC1-223ENST00000611571 DNAH11Q96DT5 4516 aa6.85□□□□□ -1.31
MUC1-223ENST00000611571 KRTAP10-6P60371 365 aaPredicted RBP6.81□□□□□ -1.32
MUC1-223ENST00000611571 KRTAP12-1P59990 96 aa6.78□□□□□ -1.32
MUC1-223ENST00000611571 DNAH9Q9NYC9 4486 aa6.77□□□□□ -1.33
MUC1-223ENST00000611571 DNAH5Q8TE73 4624 aa6.71□□□□□ -1.33
MUC1-223ENST00000611571 DNAH1Q9P2D7 4330 aa6.7□□□□□ -1.34
MUC1-223ENST00000611571 FAT1Q14517 4588 aa6.68□□□□□ -1.34
MUC1-223ENST00000611571 DNAH8Q96JB1 4490 aa6.65□□□□□ -1.34
MUC1-223ENST00000611571 KRTAP3-3Q9BYR6 98 aa6.65□□□□□ -1.35
MUC1-223ENST00000611571 STARD9Q9P2P6 4700 aa6.63□□□□□ -1.35
MUC1-223ENST00000611571 PP632Q6XCG6 107 aa6.62□□□□□ -1.35
MUC1-223ENST00000611571 KRTAP3-2Q9BYR7 98 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms