RNA–Protein interactions for RNA: ENST00000611426.4

CBWD3-207, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,381 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-207ENST00000611426 RPS29P62273 56 aaKnown RBP12.19□□□□□ -0.46
CBWD3-207ENST00000611426 SCGB1A1P11684 91 aa12.18□□□□□ -0.46
CBWD3-207ENST00000611426 KRTAP9-2Q9BYQ4 174 aa12.17□□□□□ -0.46
CBWD3-207ENST00000611426 IGKV3D-7A0A0C4DH55 119 aa12.15□□□□□ -0.46
CBWD3-207ENST00000611426 ASB16-AS1Q495Z4 193 aa12.15□□□□□ -0.46
CBWD3-207ENST00000611426 SS18L2Q9UHA2 77 aa12.14□□□□□ -0.47
CBWD3-207ENST00000611426 BPY2O14599 106 aa12.11□□□□□ -0.47
CBWD3-207ENST00000611426 SEC61BP60468 96 aaKnown RBP12.1□□□□□ -0.47
CBWD3-207ENST00000611426 LINC00472Q9H8W2 130 aa12.1□□□□□ -0.47
CBWD3-207ENST00000611426 Q5XG85 94 aa12.09□□□□□ -0.47
CBWD3-207ENST00000611426 KRTAP3-3Q9BYR6 98 aa12.05□□□□□ -0.48
CBWD3-207ENST00000611426 KRTAP3-2Q9BYR7 98 aa12.05□□□□□ -0.48
CBWD3-207ENST00000611426 J3KT08 172 aa12.03□□□□□ -0.48
CBWD3-207ENST00000611426 DSCR10P59022 87 aa12.03□□□□□ -0.48
CBWD3-207ENST00000611426 HIST1H4AP62805 103 aaKnown RBP12.03□□□□□ -0.48
CBWD3-207ENST00000611426 HRCT1Q6UXD1 115 aa12.03□□□□□ -0.48
CBWD3-207ENST00000611426 Q96NJ1 140 aa12.03□□□□□ -0.48
CBWD3-207ENST00000611426 KRTAP4-1Q9BYQ7 146 aa12.03□□□□□ -0.48
CBWD3-207ENST00000611426 IGKV4-1P06312 121 aa12□□□□□ -0.49
CBWD3-207ENST00000611426 XP32Q5T750 250 aa12□□□□□ -0.49
CBWD3-207ENST00000611426 LIMD2Q9BT23 127 aa11.97□□□□□ -0.49
CBWD3-207ENST00000611426 A0A087WVE0 104 aa11.96□□□□□ -0.49
CBWD3-207ENST00000611426 FAM236AA0A1B0GUQ0 79 aa11.94□□□□□ -0.5
CBWD3-207ENST00000611426 FAM236BA0A1B0GV22 79 aa11.94□□□□□ -0.5
CBWD3-207ENST00000611426 A8MWP4 228 aa11.94□□□□□ -0.5
CBWD3-207ENST00000611426 Q8N9L7 120 aa11.92□□□□□ -0.5
CBWD3-207ENST00000611426 K7EQZ3 153 aa11.92□□□□□ -0.5
CBWD3-207ENST00000611426 DEFB116Q30KQ4 102 aa11.91□□□□□ -0.5
CBWD3-207ENST00000611426 PRR15Q8IV56 129 aa11.91□□□□□ -0.5
CBWD3-207ENST00000611426 ATOX1O00244 68 aa11.86□□□□□ -0.51
CBWD3-207ENST00000611426 C9orf92A6NGG3 77 aa11.85□□□□□ -0.51
CBWD3-207ENST00000611426 NDUFB1O75438 58 aa11.85□□□□□ -0.51
CBWD3-207ENST00000611426 C1orf195Q5TG92 126 aa11.85□□□□□ -0.51
CBWD3-207ENST00000611426 KRTAP9-6A0A140TA67 174 aa11.81□□□□□ -0.52
CBWD3-207ENST00000611426 A0A1B0GVX0 72 aa11.8□□□□□ -0.52
CBWD3-207ENST00000611426 HCG22E2RYF7 251 aa11.8□□□□□ -0.52
CBWD3-207ENST00000611426 PCOTHQ58A44 107 aa11.8□□□□□ -0.52
CBWD3-207ENST00000611426 PCP4P48539 62 aa11.79□□□□□ -0.52
CBWD3-207ENST00000611426 ANAPC13Q9BS18 74 aa11.78□□□□□ -0.52
CBWD3-207ENST00000611426 SMIM20Q8N5G0 67 aa11.77□□□□□ -0.53
CBWD3-207ENST00000611426 MMP24-AS1A0A0U1RRL7 71 aa11.75□□□□□ -0.53
CBWD3-207ENST00000611426 LCE2CQ5TA81 110 aa11.75□□□□□ -0.53
CBWD3-207ENST00000611426 C8orf17Q9NRJ1 99 aa11.73□□□□□ -0.53
CBWD3-207ENST00000611426 C8orf87E5RJ46 101 aa11.71□□□□□ -0.53
CBWD3-207ENST00000611426 CASC2Q6XLA1 102 aa11.7□□□□□ -0.54
CBWD3-207ENST00000611426 SERP2Q8N6R1 65 aa11.7□□□□□ -0.54
CBWD3-207ENST00000611426 KRTAP19-2Q3LHN2 52 aa11.69□□□□□ -0.54
CBWD3-207ENST00000611426 TRAV7A0A075B6U4 112 aa11.68□□□□□ -0.54
CBWD3-207ENST00000611426 IGHV6-1A0A0B4J1U7 121 aa11.68□□□□□ -0.54
CBWD3-207ENST00000611426 OCR1Q9BZK8 76 aa11.68□□□□□ -0.54
CBWD3-207ENST00000611426 hDV103S1A0JD37 113 aa11.67□□□□□ -0.54
CBWD3-207ENST00000611426 WFDC13Q8IUB5 93 aa11.66□□□□□ -0.54
CBWD3-207ENST00000611426 TMEM254Q8TBM7 123 aa11.65□□□□□ -0.55
CBWD3-207ENST00000611426 COX7CP15954 63 aa11.64□□□□□ -0.55
CBWD3-207ENST00000611426 MT1HP80294 61 aa11.63□□□□□ -0.55
CBWD3-207ENST00000611426 NOTCH2NLQ7Z3S9 236 aa11.62□□□□□ -0.55
CBWD3-207ENST00000611426 UQCRQO14949 82 aa11.61□□□□□ -0.55
CBWD3-207ENST00000611426 RPL37P61927 97 aaKnown RBP11.61□□□□□ -0.55
CBWD3-207ENST00000611426 FSIP2Q5CZC0 6907 aa11.6□□□□□ -0.55
CBWD3-207ENST00000611426 LINC00313P59037 77 aa11.58□□□□□ -0.56
CBWD3-207ENST00000611426 MRPL34Q9BQ48 92 aaKnown RBP11.58□□□□□ -0.56
CBWD3-207ENST00000611426 KRTAP16-1A8MUX0 517 aa11.54□□□□□ -0.56
CBWD3-207ENST00000611426 TP53AIP1Q9HCN2 124 aa11.54□□□□□ -0.56
CBWD3-207ENST00000611426 CCDC179H3BU77 68 aa11.51□□□□□ -0.57
CBWD3-207ENST00000611426 Q8N9P0 234 aaPredicted RBP11.5□□□□□ -0.57
CBWD3-207ENST00000611426 C5orf47Q569G3 176 aa11.48□□□□□ -0.57
CBWD3-207ENST00000611426 COX6B2Q6YFQ2 88 aa11.48□□□□□ -0.57
CBWD3-207ENST00000611426 CRCT1Q9UGL9 99 aa11.47□□□□□ -0.57
CBWD3-207ENST00000611426 M0R2T5 61 aa11.46□□□□□ -0.57
CBWD3-207ENST00000611426 KLKP1Q107X0 134 aa11.44□□□□□ -0.58
CBWD3-207ENST00000611426 LORP23490 312 aaPredicted RBP11.43□□□□□ -0.58
CBWD3-207ENST00000611426 KRTAP10-6P60371 365 aaPredicted RBP11.43□□□□□ -0.58
CBWD3-207ENST00000611426 FLGP20930 4061 aaPredicted RBP11.43□□□□□ -0.58
CBWD3-207ENST00000611426 C20orf197Q8N268 126 aa11.41□□□□□ -0.58
CBWD3-207ENST00000611426 H3BPC8 53 aa11.4□□□□□ -0.59
CBWD3-207ENST00000611426 TRAV22A0A0B4J277 110 aa11.39□□□□□ -0.59
CBWD3-207ENST00000611426 ATP11AUNQ6ZP68 121 aa11.39□□□□□ -0.59
CBWD3-207ENST00000611426 NDUFS5O43920 106 aa11.38□□□□□ -0.59
CBWD3-207ENST00000611426 MP68P56378 58 aa11.37□□□□□ -0.59
CBWD3-207ENST00000611426 Q75L30 129 aa11.37□□□□□ -0.59
CBWD3-207ENST00000611426 ZCCHC13Q8WW36 166 aaKnown RBP11.36□□□□□ -0.59
CBWD3-207ENST00000611426 C20orf166-AS1Q96NR2 134 aa11.35□□□□□ -0.59
CBWD3-207ENST00000611426 H0Y9P7 68 aa11.34□□□□□ -0.59
CBWD3-207ENST00000611426 A8MUU9 505 aa11.33□□□□□ -0.6
CBWD3-207ENST00000611426 NDUFC1O43677 76 aa11.3□□□□□ -0.6
CBWD3-207ENST00000611426 CYSTM1Q9H1C7 97 aa11.29□□□□□ -0.6
CBWD3-207ENST00000611426 SNURFQ9Y675 71 aa11.28□□□□□ -0.6
CBWD3-207ENST00000611426 Q5W150 140 aa11.28□□□□□ -0.6
CBWD3-207ENST00000611426 LINC00208Q96KT6 92 aa11.25□□□□□ -0.61
CBWD3-207ENST00000611426 H7BZZ5 65 aa11.24□□□□□ -0.61
CBWD3-207ENST00000611426 C1orf64Q8NEQ6 169 aa11.23□□□□□ -0.61
CBWD3-207ENST00000611426 LOC101927531A0A1B0GV80 90 aa11.21□□□□□ -0.61
CBWD3-207ENST00000611426 TMEM258P61165 79 aa11.17□□□□□ -0.62
CBWD3-207ENST00000611426 IGKV2-30P06310 120 aa11.12□□□□□ -0.63
CBWD3-207ENST00000611426 CYP4F30PQ9H0H9 118 aa11.11□□□□□ -0.63
CBWD3-207ENST00000611426 ATP5EP56381 51 aaPredicted RBP11.07□□□□□ -0.64
CBWD3-207ENST00000611426 SPANXA2-OT1Q8N9U9 137 aa11.06□□□□□ -0.64
CBWD3-207ENST00000611426 FAM236DA0A1B0GTK5 79 aa11.02□□□□□ -0.65
CBWD3-207ENST00000611426 FAM236CP0DP71 79 aa11.02□□□□□ -0.65
CBWD3-207ENST00000611426 C7orf65Q6ZTY9 151 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms