RNA–Protein interactions for RNA: ENST00000611010.4

FDPS-220, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 5 BASIC

Gene FDPS, Length 1,196 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-220ENST00000611010 SMIM29Q86T20 159 aa6.72□□□□□ -1.33
FDPS-220ENST00000611010 Q8NBF4 154 aa6.71□□□□□ -1.34
FDPS-220ENST00000611010 SPRR1BP22528 89 aa6.7□□□□□ -1.34
FDPS-220ENST00000611010 ZNF706Q9Y5V0 76 aaPredicted RBP6.7□□□□□ -1.34
FDPS-220ENST00000611010 IGLV8-61A0A075B6I0 122 aa6.69□□□□□ -1.34
FDPS-220ENST00000611010 A0A1W2PNM2 257 aa6.69□□□□□ -1.34
FDPS-220ENST00000611010 BPY2O14599 106 aa6.69□□□□□ -1.34
FDPS-220ENST00000611010 A0A087WVE0 104 aa6.68□□□□□ -1.34
FDPS-220ENST00000611010 KRTAP13-3Q3SY46 172 aa6.68□□□□□ -1.34
FDPS-220ENST00000611010 ASB16-AS1Q495Z4 193 aa6.67□□□□□ -1.34
FDPS-220ENST00000611010 SPRR4Q96PI1 79 aa6.67□□□□□ -1.34
FDPS-220ENST00000611010 IGFL1Q6UW32 110 aa6.66□□□□□ -1.34
FDPS-220ENST00000611010 UQCRQO14949 82 aa6.63□□□□□ -1.35
FDPS-220ENST00000611010 KRTAP19-2Q3LHN2 52 aa6.63□□□□□ -1.35
FDPS-220ENST00000611010 SMIM20Q8N5G0 67 aa6.63□□□□□ -1.35
FDPS-220ENST00000611010 CCDC179H3BU77 68 aa6.62□□□□□ -1.35
FDPS-220ENST00000611010 COX7CP15954 63 aa6.62□□□□□ -1.35
FDPS-220ENST00000611010 SERP2Q8N6R1 65 aa6.62□□□□□ -1.35
FDPS-220ENST00000611010 C9orf153Q5TBE3 101 aa6.61□□□□□ -1.35
FDPS-220ENST00000611010 FP248Q71RG6 208 aaPredicted RBP6.61□□□□□ -1.35
FDPS-220ENST00000611010 LINC00483Q53H64 154 aa6.6□□□□□ -1.35
FDPS-220ENST00000611010 A0A087WSZ3 146 aa6.59□□□□□ -1.35
FDPS-220ENST00000611010 IGLV9-49A0A0B4J1Y8 123 aa6.59□□□□□ -1.35
FDPS-220ENST00000611010 A0A0G2JQZ4 141 aa6.59□□□□□ -1.35
FDPS-220ENST00000611010 IGKV4-1P06312 121 aa6.57□□□□□ -1.36
FDPS-220ENST00000611010 KRTAP4-8Q9BYQ9 185 aa6.57□□□□□ -1.36
FDPS-220ENST00000611010 TRAV7A0A075B6U4 112 aa6.56□□□□□ -1.36
FDPS-220ENST00000611010 MT1HP80294 61 aa6.56□□□□□ -1.36
FDPS-220ENST00000611010 Q8N9L7 120 aa6.56□□□□□ -1.36
FDPS-220ENST00000611010 SPAG11AQ6PDA7 123 aa6.55□□□□□ -1.36
FDPS-220ENST00000611010 SEC61BP60468 96 aaKnown RBP6.53□□□□□ -1.36
FDPS-220ENST00000611010 MOBPQ13875 183 aa6.53□□□□□ -1.36
FDPS-220ENST00000611010 J3KT08 172 aa6.52□□□□□ -1.37
FDPS-220ENST00000611010 DSCR10P59022 87 aa6.52□□□□□ -1.37
FDPS-220ENST00000611010 SS18L2Q9UHA2 77 aa6.52□□□□□ -1.37
FDPS-220ENST00000611010 FLGP20930 4061 aaPredicted RBP6.5□□□□□ -1.37
FDPS-220ENST00000611010 NDUFB1O75438 58 aa6.5□□□□□ -1.37
FDPS-220ENST00000611010 DEFB116Q30KQ4 102 aa6.5□□□□□ -1.37
FDPS-220ENST00000611010 HRCT1Q6UXD1 115 aa6.5□□□□□ -1.37
FDPS-220ENST00000611010 K7EQZ3 153 aa6.49□□□□□ -1.37
FDPS-220ENST00000611010 SSBP3-AS1Q7Z2R9 100 aa6.49□□□□□ -1.37
FDPS-220ENST00000611010 HCG22E2RYF7 251 aa6.48□□□□□ -1.37
FDPS-220ENST00000611010 SPINK1P00995 79 aa6.48□□□□□ -1.37
FDPS-220ENST00000611010 LINC00472Q9H8W2 130 aa6.48□□□□□ -1.37
FDPS-220ENST00000611010 A8MWP4 228 aa6.47□□□□□ -1.37
FDPS-220ENST00000611010 KRTAP10-6P60371 365 aaPredicted RBP6.47□□□□□ -1.37
FDPS-220ENST00000611010 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.46□□□□□ -1.38
FDPS-220ENST00000611010 C20orf197Q8N268 126 aa6.46□□□□□ -1.38
FDPS-220ENST00000611010 RPS29P62273 56 aaKnown RBP6.45□□□□□ -1.38
FDPS-220ENST00000611010 CD164Q04900 197 aa6.45□□□□□ -1.38
FDPS-220ENST00000611010 PRR15Q8IV56 129 aa6.45□□□□□ -1.38
FDPS-220ENST00000611010 OCR1Q9BZK8 76 aa6.43□□□□□ -1.38
FDPS-220ENST00000611010 CASC2Q6XLA1 102 aa6.42□□□□□ -1.38
FDPS-220ENST00000611010 WFDC13Q8IUB5 93 aa6.42□□□□□ -1.38
FDPS-220ENST00000611010 TMEM258P61165 79 aa6.41□□□□□ -1.38
FDPS-220ENST00000611010 NDUFC1O43677 76 aa6.4□□□□□ -1.38
FDPS-220ENST00000611010 PCOTHQ58A44 107 aa6.4□□□□□ -1.38
FDPS-220ENST00000611010 TMEM254Q8TBM7 123 aa6.4□□□□□ -1.38
FDPS-220ENST00000611010 KLKP1Q107X0 134 aa6.39□□□□□ -1.39
FDPS-220ENST00000611010 C5orf47Q569G3 176 aa6.39□□□□□ -1.39
FDPS-220ENST00000611010 SNURFQ9Y675 71 aa6.38□□□□□ -1.39
FDPS-220ENST00000611010 Q96NJ1 140 aa6.37□□□□□ -1.39
FDPS-220ENST00000611010 A0A1B0GVX0 72 aa6.36□□□□□ -1.39
FDPS-220ENST00000611010 hDV103S1A0JD37 113 aa6.36□□□□□ -1.39
FDPS-220ENST00000611010 IGHV6-1A0A0B4J1U7 121 aa6.35□□□□□ -1.39
FDPS-220ENST00000611010 KRTAP9-7A8MTY7 169 aa6.35□□□□□ -1.39
FDPS-220ENST00000611010 MP68P56378 58 aa6.35□□□□□ -1.39
FDPS-220ENST00000611010 CYSTM1Q9H1C7 97 aa6.35□□□□□ -1.39
FDPS-220ENST00000611010 LIMD2Q9BT23 127 aa6.34□□□□□ -1.39
FDPS-220ENST00000611010 C8orf17Q9NRJ1 99 aa6.34□□□□□ -1.39
FDPS-220ENST00000611010 MMP24-AS1A0A0U1RRL7 71 aa6.33□□□□□ -1.4
FDPS-220ENST00000611010 C9orf92A6NGG3 77 aa6.33□□□□□ -1.4
FDPS-220ENST00000611010 SSPOA2VEC9 5147 aa6.32□□□□□ -1.4
FDPS-220ENST00000611010 FAM236DA0A1B0GTK5 79 aa6.31□□□□□ -1.4
FDPS-220ENST00000611010 H7BZZ5 65 aa6.31□□□□□ -1.4
FDPS-220ENST00000611010 FAM236CP0DP71 79 aa6.31□□□□□ -1.4
FDPS-220ENST00000611010 Q5XG85 94 aa6.31□□□□□ -1.4
FDPS-220ENST00000611010 TP53AIP1Q9HCN2 124 aa6.31□□□□□ -1.4
FDPS-220ENST00000611010 C8orf87E5RJ46 101 aa6.3□□□□□ -1.4
FDPS-220ENST00000611010 H3BPC8 53 aa6.3□□□□□ -1.4
FDPS-220ENST00000611010 USH2AO75445 5202 aa6.29□□□□□ -1.4
FDPS-220ENST00000611010 NDUFS5O43920 106 aa6.29□□□□□ -1.4
FDPS-220ENST00000611010 ATP5EP56381 51 aaPredicted RBP6.29□□□□□ -1.4
FDPS-220ENST00000611010 RPS28P62857 69 aaKnown RBP6.29□□□□□ -1.4
FDPS-220ENST00000611010 LCE3BQ5TA77 95 aa6.29□□□□□ -1.4
FDPS-220ENST00000611010 H0Y9P7 68 aa6.28□□□□□ -1.4
FDPS-220ENST00000611010 MRPL34Q9BQ48 92 aaKnown RBP6.28□□□□□ -1.4
FDPS-220ENST00000611010 M0R2T5 61 aa6.27□□□□□ -1.41
FDPS-220ENST00000611010 LINC00208Q96KT6 92 aa6.26□□□□□ -1.41
FDPS-220ENST00000611010 C1orf195Q5TG92 126 aa6.25□□□□□ -1.41
FDPS-220ENST00000611010 KRTAP4-12Q9BQ66 201 aa6.25□□□□□ -1.41
FDPS-220ENST00000611010 LINC00313P59037 77 aa6.24□□□□□ -1.41
FDPS-220ENST00000611010 TRAV22A0A0B4J277 110 aa6.23□□□□□ -1.41
FDPS-220ENST00000611010 C1orf64Q8NEQ6 169 aa6.23□□□□□ -1.41
FDPS-220ENST00000611010 ZCCHC13Q8WW36 166 aaKnown RBP6.23□□□□□ -1.41
FDPS-220ENST00000611010 SERP1Q9Y6X1 66 aa6.23□□□□□ -1.41
FDPS-220ENST00000611010 RPL37P61927 97 aaKnown RBP6.22□□□□□ -1.41
FDPS-220ENST00000611010 NOTCH2NLQ7Z3S9 236 aa6.21□□□□□ -1.42
FDPS-220ENST00000611010 COX6B2Q6YFQ2 88 aa6.2□□□□□ -1.42
FDPS-220ENST00000611010 FCGBPQ9Y6R7 5405 aaPredicted RBP6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms