RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 C8orf87E5RJ46 101 aa13.24□□□□□ -0.29
SHANK2-220ENST00000608988 A0A087X002 238 aa13.23□□□□□ -0.29
SHANK2-220ENST00000608988 NOTCH2NLQ7Z3S9 236 aa13.23□□□□□ -0.29
SHANK2-220ENST00000608988 A0A087WTM6 91 aa13.22□□□□□ -0.29
SHANK2-220ENST00000608988 ACYP2P14621 99 aa13.22□□□□□ -0.29
SHANK2-220ENST00000608988 SPINK7P58062 85 aa13.2□□□□□ -0.3
SHANK2-220ENST00000608988 C7orf65Q6ZTY9 151 aa13.2□□□□□ -0.3
SHANK2-220ENST00000608988 DYNC2H1Q8NCM8 4307 aaKnown RBP13.2□□□□□ -0.3
SHANK2-220ENST00000608988 DNAH9Q9NYC9 4486 aa13.17□□□□□ -0.3
SHANK2-220ENST00000608988 KRTAP21-3Q3LHN1 58 aa13.17□□□□□ -0.3
SHANK2-220ENST00000608988 LYSTQ99698 3801 aa13.17□□□□□ -0.3
SHANK2-220ENST00000608988 Q5W150 140 aa13.16□□□□□ -0.3
SHANK2-220ENST00000608988 RTL8CO15255 209 aa13.16□□□□□ -0.3
SHANK2-220ENST00000608988 RBM12B-AS1Q9P1G2 102 aa13.16□□□□□ -0.3
SHANK2-220ENST00000608988 DMAC1Q96GE9 116 aa13.12□□□□□ -0.31
SHANK2-220ENST00000608988 ANAPC11Q9NYG5 84 aa13.12□□□□□ -0.31
SHANK2-220ENST00000608988 SSBP3-AS1Q7Z2R9 100 aa13.11□□□□□ -0.31
SHANK2-220ENST00000608988 PRR26Q8N8Z3 221 aa13.1□□□□□ -0.31
SHANK2-220ENST00000608988 SPINK6Q6UWN8 80 aa13.09□□□□□ -0.31
SHANK2-220ENST00000608988 IGLV7-43P04211 117 aa13.07□□□□□ -0.32
SHANK2-220ENST00000608988 STAB2Q8WWQ8 2551 aa13.06□□□□□ -0.32
SHANK2-220ENST00000608988 FAM229AH3BQW9 127 aa13.06□□□□□ -0.32
SHANK2-220ENST00000608988 CIRBP-AS1Q8TBR5 109 aa13.02□□□□□ -0.32
SHANK2-220ENST00000608988 LINC00313P59037 77 aa12.99□□□□□ -0.33
SHANK2-220ENST00000608988 IGKV2-30P06310 120 aa12.96□□□□□ -0.33
SHANK2-220ENST00000608988 COL7A1Q02388 2944 aa12.94□□□□□ -0.34
SHANK2-220ENST00000608988 PRKDCP78527 4128 aaKnown RBP12.94□□□□□ -0.34
SHANK2-220ENST00000608988 A0A1B0GU69 56 aa12.92□□□□□ -0.34
SHANK2-220ENST00000608988 ALMS1Q8TCU4 4167 aa12.91□□□□□ -0.34
SHANK2-220ENST00000608988 MEGF8Q7Z7M0 2845 aa12.9□□□□□ -0.34
SHANK2-220ENST00000608988 SPATA8Q6RVD6 105 aa12.89□□□□□ -0.35
SHANK2-220ENST00000608988 DNAH7Q8WXX0 4024 aa12.88□□□□□ -0.35
SHANK2-220ENST00000608988 PLA2G1BP04054 148 aaKnown RBP12.82□□□□□ -0.36
SHANK2-220ENST00000608988 C1orf134Q5TEV5 83 aa12.82□□□□□ -0.36
SHANK2-220ENST00000608988 CSMD3Q7Z407 3707 aa12.81□□□□□ -0.36
SHANK2-220ENST00000608988 PLECQ15149 4684 aaKnown RBP12.81□□□□□ -0.36
SHANK2-220ENST00000608988 KRTAP16-1A8MUX0 517 aa12.8□□□□□ -0.36
SHANK2-220ENST00000608988 HECTD4Q9Y4D8 3996 aa12.8□□□□□ -0.36
SHANK2-220ENST00000608988 VPS13DQ5THJ4 4388 aa12.8□□□□□ -0.36
SHANK2-220ENST00000608988 DNAH8Q96JB1 4490 aa12.79□□□□□ -0.36
SHANK2-220ENST00000608988 UQCR11O14957 56 aa12.78□□□□□ -0.36
SHANK2-220ENST00000608988 MIR22HGQ0VDD5 57 aa12.74□□□□□ -0.37
SHANK2-220ENST00000608988 DNAH17Q9UFH2 4485 aa12.73□□□□□ -0.37
SHANK2-220ENST00000608988 KRTAP13-2Q52LG2 175 aa12.72□□□□□ -0.37
SHANK2-220ENST00000608988 FBN3Q75N90 2809 aa12.72□□□□□ -0.37
SHANK2-220ENST00000608988 RETNLBQ9BQ08 111 aa12.72□□□□□ -0.37
SHANK2-220ENST00000608988 IGKV2D-30A0A075B6S6 120 aa12.69□□□□□ -0.38
SHANK2-220ENST00000608988 PRAC1Q96KF2 57 aa12.59□□□□□ -0.39
SHANK2-220ENST00000608988 Q6ZSA8 131 aa12.57□□□□□ -0.4
SHANK2-220ENST00000608988 FRAS1Q86XX4 4008 aa12.56□□□□□ -0.4
SHANK2-220ENST00000608988 STARD9Q9P2P6 4700 aa12.54□□□□□ -0.4
SHANK2-220ENST00000608988 KRTAP1-4P0C5Y4 121 aa12.53□□□□□ -0.4
SHANK2-220ENST00000608988 C4orf48Q5BLP8 95 aa12.52□□□□□ -0.41
SHANK2-220ENST00000608988 KRTAP10-2P60368 255 aa12.51□□□□□ -0.41
SHANK2-220ENST00000608988 ADM2Q7Z4H4 148 aa12.51□□□□□ -0.41
SHANK2-220ENST00000608988 SPINK1P00995 79 aa12.5□□□□□ -0.41
SHANK2-220ENST00000608988 TGP01266 2768 aa12.5□□□□□ -0.41
SHANK2-220ENST00000608988 LINC01554Q52M75 96 aa12.49□□□□□ -0.41
SHANK2-220ENST00000608988 LY6G6CO95867 125 aa12.46□□□□□ -0.41
SHANK2-220ENST00000608988 DNAH2Q9P225 4427 aa12.45□□□□□ -0.42
SHANK2-220ENST00000608988 RPS29P62273 56 aaKnown RBP12.42□□□□□ -0.42
SHANK2-220ENST00000608988 KRTAP10-1P60331 282 aa12.4□□□□□ -0.42
SHANK2-220ENST00000608988 TYMSOSQ8TAI1 123 aa12.4□□□□□ -0.42
SHANK2-220ENST00000608988 DNAH6Q9C0G6 4158 aa12.34□□□□□ -0.43
SHANK2-220ENST00000608988 KMT2AQ03164 3969 aa12.34□□□□□ -0.43
SHANK2-220ENST00000608988 Q8N1X5 172 aa12.31□□□□□ -0.44
SHANK2-220ENST00000608988 CSAG1Q6PB30 78 aa12.27□□□□□ -0.45
SHANK2-220ENST00000608988 DNAH11Q96DT5 4516 aa12.27□□□□□ -0.45
SHANK2-220ENST00000608988 LINC00304Q8N9R0 145 aa12.25□□□□□ -0.45
SHANK2-220ENST00000608988 DNAH5Q8TE73 4624 aa12.21□□□□□ -0.45
SHANK2-220ENST00000608988 A8MUU9 505 aa12.19□□□□□ -0.46
SHANK2-220ENST00000608988 C20orf166-AS1Q96NR2 134 aa12.19□□□□□ -0.46
SHANK2-220ENST00000608988 H0YAA0 97 aa12.17□□□□□ -0.46
SHANK2-220ENST00000608988 A0A1B0GU33 70 aa12.13□□□□□ -0.47
SHANK2-220ENST00000608988 H1FX-AS1Q4G0G2 97 aa12.1□□□□□ -0.47
SHANK2-220ENST00000608988 LRP1BQ9NZR2 4599 aa12.06□□□□□ -0.48
SHANK2-220ENST00000608988 KRTAP3-1Q9BYR8 98 aa12.05□□□□□ -0.48
SHANK2-220ENST00000608988 PKD1P98161 4303 aa12.05□□□□□ -0.48
SHANK2-220ENST00000608988 SACSQ9NZJ4 4579 aa12.03□□□□□ -0.48
SHANK2-220ENST00000608988 KRTAP25-1Q3LHN0 102 aa12.01□□□□□ -0.49
SHANK2-220ENST00000608988 HYDINQ4G0P3 5121 aa11.99□□□□□ -0.49
SHANK2-220ENST00000608988 C9orf92A6NGG3 77 aa11.94□□□□□ -0.5
SHANK2-220ENST00000608988 K7ERS5 55 aa11.94□□□□□ -0.5
SHANK2-220ENST00000608988 VPS13BQ7Z7G8 4022 aa11.92□□□□□ -0.5
SHANK2-220ENST00000608988 COX6B2Q6YFQ2 88 aa11.91□□□□□ -0.5
SHANK2-220ENST00000608988 FAT2Q9NYQ8 4349 aa11.88□□□□□ -0.51
SHANK2-220ENST00000608988 KMT2CQ8NEZ4 4911 aaKnown RBP11.83□□□□□ -0.52
SHANK2-220ENST00000608988 RYR2Q92736 4967 aa11.78□□□□□ -0.52
SHANK2-220ENST00000608988 KRTAP10-4P60372 401 aaPredicted RBP11.71□□□□□ -0.53
SHANK2-220ENST00000608988 H3BS24 57 aa11.7□□□□□ -0.54
SHANK2-220ENST00000608988 ROMO1P60602 79 aa11.7□□□□□ -0.54
SHANK2-220ENST00000608988 SMR3BP02814 79 aaPredicted RBP11.68□□□□□ -0.54
SHANK2-220ENST00000608988 PKHD1L1Q86WI1 4243 aa11.65□□□□□ -0.55
SHANK2-220ENST00000608988 RPL37P61927 97 aaKnown RBP11.62□□□□□ -0.55
SHANK2-220ENST00000608988 PKHD1P08F94 4074 aa11.6□□□□□ -0.55
SHANK2-220ENST00000608988 KRTAP10-6P60371 365 aaPredicted RBP11.57□□□□□ -0.56
SHANK2-220ENST00000608988 RYR3Q15413 4870 aa11.57□□□□□ -0.56
SHANK2-220ENST00000608988 A0A1B0GVY2 172 aa11.55□□□□□ -0.56
SHANK2-220ENST00000608988 KRTAP3-3Q9BYR6 98 aa11.53□□□□□ -0.56
SHANK2-220ENST00000608988 APOBP04114 4563 aaKnown RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 185.8 ms