RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 KRTAP13-3Q3SY46 172 aa4.25□□□□□ -1.73
MSH6-211ENST00000606499 LINC00846Q9NV44 126 aa4.25□□□□□ -1.73
MSH6-211ENST00000606499 Q6ZVQ6 151 aa4.24□□□□□ -1.73
MSH6-211ENST00000606499 CDIP1Q9H305 208 aa4.22□□□□□ -1.73
MSH6-211ENST00000606499 J3KT08 172 aa4.21□□□□□ -1.74
MSH6-211ENST00000606499 DSCR10P59022 87 aa4.21□□□□□ -1.74
MSH6-211ENST00000606499 UBL5Q9BZL1 73 aa4.21□□□□□ -1.74
MSH6-211ENST00000606499 IGHV6-1A0A0B4J1U7 121 aa4.2□□□□□ -1.74
MSH6-211ENST00000606499 LOC100996750A0A140TA64 210 aa4.2□□□□□ -1.74
MSH6-211ENST00000606499 FAM240AA0A1B0GVK7 77 aa4.2□□□□□ -1.74
MSH6-211ENST00000606499 A0A1B0GVX0 72 aa4.2□□□□□ -1.74
MSH6-211ENST00000606499 BPY2O14599 106 aa4.2□□□□□ -1.74
MSH6-211ENST00000606499 XP32Q5T750 250 aa4.2□□□□□ -1.74
MSH6-211ENST00000606499 KRTAP4-6Q9BYQ5 205 aa4.2□□□□□ -1.74
MSH6-211ENST00000606499 IGKV3D-7A0A0C4DH55 119 aa4.19□□□□□ -1.74
MSH6-211ENST00000606499 A8MWP4 228 aa4.19□□□□□ -1.74
MSH6-211ENST00000606499 ACYP1P07311 99 aa4.19□□□□□ -1.74
MSH6-211ENST00000606499 NOTCH2NLQ7Z3S9 236 aa4.19□□□□□ -1.74
MSH6-211ENST00000606499 RNF213Q63HN8 5207 aa4.18□□□□□ -1.74
MSH6-211ENST00000606499 K7EQZ3 153 aa4.18□□□□□ -1.74
MSH6-211ENST00000606499 Q8N9L7 120 aa4.18□□□□□ -1.74
MSH6-211ENST00000606499 NDUFB1O75438 58 aa4.17□□□□□ -1.74
MSH6-211ENST00000606499 KRTAP16-1A8MUX0 517 aa4.16□□□□□ -1.74
MSH6-211ENST00000606499 J3QR89 54 aa4.16□□□□□ -1.74
MSH6-211ENST00000606499 LINC00313P59037 77 aa4.16□□□□□ -1.74
MSH6-211ENST00000606499 PRR15Q8IV56 129 aa4.16□□□□□ -1.74
MSH6-211ENST00000606499 C8orf87E5RJ46 101 aa4.15□□□□□ -1.75
MSH6-211ENST00000606499 C8orf17Q9NRJ1 99 aa4.15□□□□□ -1.75
MSH6-211ENST00000606499 MMP24-AS1A0A0U1RRL7 71 aa4.14□□□□□ -1.75
MSH6-211ENST00000606499 CXCL6P80162 114 aa4.14□□□□□ -1.75
MSH6-211ENST00000606499 MUC17Q685J3 4493 aa4.14□□□□□ -1.75
MSH6-211ENST00000606499 MUC2Q02817 5179 aa4.14□□□□□ -1.75
MSH6-211ENST00000606499 K7ERU9 68 aa4.13□□□□□ -1.75
MSH6-211ENST00000606499 RPL37P61927 97 aaKnown RBP4.13□□□□□ -1.75
MSH6-211ENST00000606499 ATP5EP2Q5VTU8 51 aa4.12□□□□□ -1.75
MSH6-211ENST00000606499 C20orf166-AS1Q96NR2 134 aa4.12□□□□□ -1.75
MSH6-211ENST00000606499 A8MUU9 505 aa4.11□□□□□ -1.75
MSH6-211ENST00000606499 Q75L30 129 aa4.11□□□□□ -1.75
MSH6-211ENST00000606499 LINC00643Q86TS7 51 aa4.11□□□□□ -1.75
MSH6-211ENST00000606499 hDV103S1A0JD37 113 aa4.1□□□□□ -1.75
MSH6-211ENST00000606499 SEC61BP60468 96 aaKnown RBP4.1□□□□□ -1.75
MSH6-211ENST00000606499 PCOTHQ58A44 107 aa4.1□□□□□ -1.75
MSH6-211ENST00000606499 WFDC13Q8IUB5 93 aa4.1□□□□□ -1.75
MSH6-211ENST00000606499 CASC2Q6XLA1 102 aa4.09□□□□□ -1.75
MSH6-211ENST00000606499 TMEM254Q8TBM7 123 aa4.09□□□□□ -1.75
MSH6-211ENST00000606499 MRPL34Q9BQ48 92 aaKnown RBP4.09□□□□□ -1.75
MSH6-211ENST00000606499 HCG22E2RYF7 251 aa4.08□□□□□ -1.76
MSH6-211ENST00000606499 HIST1H4AP62805 103 aaKnown RBP4.08□□□□□ -1.76
MSH6-211ENST00000606499 Q8N9P0 234 aaPredicted RBP4.08□□□□□ -1.76
MSH6-211ENST00000606499 A0A087WVE0 104 aa4.07□□□□□ -1.76
MSH6-211ENST00000606499 KRTAP4-1Q9BYQ7 146 aa4.07□□□□□ -1.76
MSH6-211ENST00000606499 NDUFS5O43920 106 aa4.06□□□□□ -1.76
MSH6-211ENST00000606499 ATP11AUNQ6ZP68 121 aa4.06□□□□□ -1.76
MSH6-211ENST00000606499 MT-ATP8P03928 68 aa4.04□□□□□ -1.76
MSH6-211ENST00000606499 ZCCHC13Q8WW36 166 aaKnown RBP4.04□□□□□ -1.76
MSH6-211ENST00000606499 Q5W150 140 aa4.01□□□□□ -1.77
MSH6-211ENST00000606499 IMUPQ9GZP8 106 aa3.98□□□□□ -1.77
MSH6-211ENST00000606499 TP53AIP1Q9HCN2 124 aa3.97□□□□□ -1.77
MSH6-211ENST00000606499 SPINK7P58062 85 aa3.96□□□□□ -1.78
MSH6-211ENST00000606499 FAT4Q6V0I7 4981 aa3.95□□□□□ -1.78
MSH6-211ENST00000606499 IGKV2D-30A0A075B6S6 120 aa3.95□□□□□ -1.78
MSH6-211ENST00000606499 FAM236AA0A1B0GUQ0 79 aa3.95□□□□□ -1.78
MSH6-211ENST00000606499 FAM236BA0A1B0GV22 79 aa3.95□□□□□ -1.78
MSH6-211ENST00000606499 IGKV2-30P06310 120 aa3.95□□□□□ -1.78
MSH6-211ENST00000606499 KRTAP4-8Q9BYQ9 185 aa3.95□□□□□ -1.78
MSH6-211ENST00000606499 TRAV22A0A0B4J277 110 aa3.94□□□□□ -1.78
MSH6-211ENST00000606499 OCR1Q9BZK8 76 aa3.94□□□□□ -1.78
MSH6-211ENST00000606499 UQCRQO14949 82 aa3.93□□□□□ -1.78
MSH6-211ENST00000606499 SCGB1A1P11684 91 aa3.93□□□□□ -1.78
MSH6-211ENST00000606499 HRES1P13985 223 aa3.93□□□□□ -1.78
MSH6-211ENST00000606499 KRTAP19-2Q3LHN2 52 aa3.93□□□□□ -1.78
MSH6-211ENST00000606499 C7orf65Q6ZTY9 151 aa3.93□□□□□ -1.78
MSH6-211ENST00000606499 H0Y9P7 68 aa3.92□□□□□ -1.78
MSH6-211ENST00000606499 PCP4P48539 62 aa3.92□□□□□ -1.78
MSH6-211ENST00000606499 MPLKIPQ8TAP9 179 aa3.91□□□□□ -1.78
MSH6-211ENST00000606499 A0A0U1RQV1 116 aa3.9□□□□□ -1.79
MSH6-211ENST00000606499 COX6B2Q6YFQ2 88 aa3.89□□□□□ -1.79
MSH6-211ENST00000606499 LOC101927531A0A1B0GV80 90 aa3.88□□□□□ -1.79
MSH6-211ENST00000606499 ATOX1O00244 68 aa3.88□□□□□ -1.79
MSH6-211ENST00000606499 LINC00208Q96KT6 92 aa3.88□□□□□ -1.79
MSH6-211ENST00000606499 RBM12B-AS1Q9P1G2 102 aa3.88□□□□□ -1.79
MSH6-211ENST00000606499 TRAV7A0A075B6U4 112 aa3.87□□□□□ -1.79
MSH6-211ENST00000606499 FAM236DA0A1B0GTK5 79 aa3.87□□□□□ -1.79
MSH6-211ENST00000606499 FAM236CP0DP71 79 aa3.87□□□□□ -1.79
MSH6-211ENST00000606499 C1orf64Q8NEQ6 169 aa3.87□□□□□ -1.79
MSH6-211ENST00000606499 KRTAP9-2Q9BYQ4 174 aa3.87□□□□□ -1.79
MSH6-211ENST00000606499 CYP4F30PQ9H0H9 118 aa3.87□□□□□ -1.79
MSH6-211ENST00000606499 FLGP20930 4061 aaPredicted RBP3.86□□□□□ -1.79
MSH6-211ENST00000606499 MP68P56378 58 aa3.86□□□□□ -1.79
MSH6-211ENST00000606499 C4orf26Q17RF5 130 aa3.86□□□□□ -1.79
MSH6-211ENST00000606499 C5orf47Q569G3 176 aa3.86□□□□□ -1.79
MSH6-211ENST00000606499 KRTAP19-1Q8IUB9 90 aa3.86□□□□□ -1.79
MSH6-211ENST00000606499 SMIM20Q8N5G0 67 aa3.86□□□□□ -1.79
MSH6-211ENST00000606499 KRTAP4-12Q9BQ66 201 aa3.86□□□□□ -1.79
MSH6-211ENST00000606499 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.85□□□□□ -1.79
MSH6-211ENST00000606499 KRTAP9-6A0A140TA67 174 aa3.84□□□□□ -1.79
MSH6-211ENST00000606499 MT1HP80294 61 aa3.84□□□□□ -1.79
MSH6-211ENST00000606499 KLKP1Q107X0 134 aa3.83□□□□□ -1.8
MSH6-211ENST00000606499 H3BPC8 53 aa3.82□□□□□ -1.8
MSH6-211ENST00000606499 KRTAP19-4Q3LI73 84 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms