RNA–Protein interactions for RNA: ENST00000606066.1

CTSA-211, Transcript of cathepsin A, humanhuman

TSL 5

Gene CTSA, Length 603 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-211ENST00000606066 DEFB116Q30KQ4 102 aa7.74□□□□□ -1.17
CTSA-211ENST00000606066 NREPQ16612 68 aa7.71□□□□□ -1.18
CTSA-211ENST00000606066 RPL37P61927 97 aaKnown RBP7.7□□□□□ -1.18
CTSA-211ENST00000606066 LINC00313P59037 77 aa7.69□□□□□ -1.18
CTSA-211ENST00000606066 NDUFB1O75438 58 aa7.68□□□□□ -1.18
CTSA-211ENST00000606066 DSCR10P59022 87 aa7.68□□□□□ -1.18
CTSA-211ENST00000606066 IGHV6-1A0A0B4J1U7 121 aa7.67□□□□□ -1.18
CTSA-211ENST00000606066 PCOTHQ58A44 107 aa7.67□□□□□ -1.18
CTSA-211ENST00000606066 Q75L30 129 aa7.67□□□□□ -1.18
CTSA-211ENST00000606066 FSIP2Q5CZC0 6907 aa7.66□□□□□ -1.18
CTSA-211ENST00000606066 A0A1B0GVX0 72 aa7.66□□□□□ -1.18
CTSA-211ENST00000606066 C8orf87E5RJ46 101 aa7.66□□□□□ -1.18
CTSA-211ENST00000606066 ATP11AUNQ6ZP68 121 aa7.64□□□□□ -1.19
CTSA-211ENST00000606066 A8MWP4 228 aa7.63□□□□□ -1.19
CTSA-211ENST00000606066 ETDBQ3ZM63 59 aa7.63□□□□□ -1.19
CTSA-211ENST00000606066 C20orf166-AS1Q96NR2 134 aa7.63□□□□□ -1.19
CTSA-211ENST00000606066 A8MUU9 505 aa7.61□□□□□ -1.19
CTSA-211ENST00000606066 LCE2DQ5TA82 110 aaPredicted RBP7.61□□□□□ -1.19
CTSA-211ENST00000606066 NOTCH2NLQ7Z3S9 236 aa7.6□□□□□ -1.19
CTSA-211ENST00000606066 BPY2O14599 106 aa7.59□□□□□ -1.19
CTSA-211ENST00000606066 Q6ZVQ6 151 aa7.59□□□□□ -1.19
CTSA-211ENST00000606066 UBL5Q9BZL1 73 aa7.59□□□□□ -1.19
CTSA-211ENST00000606066 IGKV3D-7A0A0C4DH55 119 aa7.58□□□□□ -1.2
CTSA-211ENST00000606066 KRTAP16-1A8MUX0 517 aa7.58□□□□□ -1.2
CTSA-211ENST00000606066 PRR15Q8IV56 129 aa7.57□□□□□ -1.2
CTSA-211ENST00000606066 KRTAP4-1Q9BYQ7 146 aa7.57□□□□□ -1.2
CTSA-211ENST00000606066 A0A1B0GV90 55 aa7.56□□□□□ -1.2
CTSA-211ENST00000606066 LINC00846Q9NV44 126 aa7.56□□□□□ -1.2
CTSA-211ENST00000606066 C8orf17Q9NRJ1 99 aa7.55□□□□□ -1.2
CTSA-211ENST00000606066 K7EQZ3 153 aa7.52□□□□□ -1.21
CTSA-211ENST00000606066 CRCT1Q9UGL9 99 aa7.51□□□□□ -1.21
CTSA-211ENST00000606066 ACYP1P07311 99 aa7.49□□□□□ -1.21
CTSA-211ENST00000606066 Q8N9P0 234 aaPredicted RBP7.49□□□□□ -1.21
CTSA-211ENST00000606066 MMP24-AS1A0A0U1RRL7 71 aa7.47□□□□□ -1.21
CTSA-211ENST00000606066 TMEM254Q8TBM7 123 aa7.47□□□□□ -1.21
CTSA-211ENST00000606066 hDV103S1A0JD37 113 aa7.46□□□□□ -1.22
CTSA-211ENST00000606066 MRPL34Q9BQ48 92 aaKnown RBP7.46□□□□□ -1.22
CTSA-211ENST00000606066 FAM240AA0A1B0GVK7 77 aa7.45□□□□□ -1.22
CTSA-211ENST00000606066 CXCL6P80162 114 aa7.44□□□□□ -1.22
CTSA-211ENST00000606066 Q8N9L7 120 aa7.44□□□□□ -1.22
CTSA-211ENST00000606066 ZCCHC13Q8WW36 166 aaKnown RBP7.43□□□□□ -1.22
CTSA-211ENST00000606066 CASC2Q6XLA1 102 aa7.41□□□□□ -1.22
CTSA-211ENST00000606066 NDUFS5O43920 106 aa7.4□□□□□ -1.22
CTSA-211ENST00000606066 LCE2CQ5TA81 110 aa7.39□□□□□ -1.23
CTSA-211ENST00000606066 WFDC13Q8IUB5 93 aa7.39□□□□□ -1.23
CTSA-211ENST00000606066 HCG22E2RYF7 251 aa7.37□□□□□ -1.23
CTSA-211ENST00000606066 J3QR89 54 aa7.36□□□□□ -1.23
CTSA-211ENST00000606066 ATP5EP2Q5VTU8 51 aa7.36□□□□□ -1.23
CTSA-211ENST00000606066 COX6B2Q6YFQ2 88 aa7.36□□□□□ -1.23
CTSA-211ENST00000606066 KRTAP19-2Q3LHN2 52 aa7.35□□□□□ -1.23
CTSA-211ENST00000606066 SPINK7P58062 85 aa7.31□□□□□ -1.24
CTSA-211ENST00000606066 LINC00643Q86TS7 51 aa7.31□□□□□ -1.24
CTSA-211ENST00000606066 MT1HP80294 61 aa7.29□□□□□ -1.24
CTSA-211ENST00000606066 RBM12B-AS1Q9P1G2 102 aa7.29□□□□□ -1.24
CTSA-211ENST00000606066 HIST1H4AP62805 103 aaKnown RBP7.27□□□□□ -1.25
CTSA-211ENST00000606066 HRES1P13985 223 aa7.26□□□□□ -1.25
CTSA-211ENST00000606066 TP53AIP1Q9HCN2 124 aa7.26□□□□□ -1.25
CTSA-211ENST00000606066 FAM236DA0A1B0GTK5 79 aa7.24□□□□□ -1.25
CTSA-211ENST00000606066 FAM236CP0DP71 79 aa7.24□□□□□ -1.25
CTSA-211ENST00000606066 LORP23490 312 aaPredicted RBP7.24□□□□□ -1.25
CTSA-211ENST00000606066 Q5W150 140 aa7.23□□□□□ -1.25
CTSA-211ENST00000606066 MPLKIPQ8TAP9 179 aa7.23□□□□□ -1.25
CTSA-211ENST00000606066 M0R2T5 61 aa7.2□□□□□ -1.26
CTSA-211ENST00000606066 KRTAP10-6P60371 365 aaPredicted RBP7.2□□□□□ -1.26
CTSA-211ENST00000606066 C7orf65Q6ZTY9 151 aa7.2□□□□□ -1.26
CTSA-211ENST00000606066 IGKV2D-30A0A075B6S6 120 aa7.19□□□□□ -1.26
CTSA-211ENST00000606066 IGKV2-30P06310 120 aa7.19□□□□□ -1.26
CTSA-211ENST00000606066 K7ERU9 68 aa7.18□□□□□ -1.26
CTSA-211ENST00000606066 FLGP20930 4061 aaPredicted RBP7.17□□□□□ -1.26
CTSA-211ENST00000606066 A0A087WVE0 104 aa7.15□□□□□ -1.26
CTSA-211ENST00000606066 TRAV22A0A0B4J277 110 aa7.1□□□□□ -1.27
CTSA-211ENST00000606066 UQCRQO14949 82 aa7.1□□□□□ -1.27
CTSA-211ENST00000606066 IMUPQ9GZP8 106 aa7.06□□□□□ -1.28
CTSA-211ENST00000606066 SSPOA2VEC9 5147 aa7.05□□□□□ -1.28
CTSA-211ENST00000606066 ATOX1O00244 68 aa7.05□□□□□ -1.28
CTSA-211ENST00000606066 USH2AO75445 5202 aa7.04□□□□□ -1.28
CTSA-211ENST00000606066 LOC101927531A0A1B0GV80 90 aa7.04□□□□□ -1.28
CTSA-211ENST00000606066 SCGB1A1P11684 91 aa7.03□□□□□ -1.28
CTSA-211ENST00000606066 C4orf26Q17RF5 130 aa7.03□□□□□ -1.28
CTSA-211ENST00000606066 H1FX-AS1Q4G0G2 97 aa7.03□□□□□ -1.28
CTSA-211ENST00000606066 H0Y9P7 68 aa7.02□□□□□ -1.29
CTSA-211ENST00000606066 CYP4F30PQ9H0H9 118 aa7.02□□□□□ -1.29
CTSA-211ENST00000606066 KRTAP9-7A8MTY7 169 aa7□□□□□ -1.29
CTSA-211ENST00000606066 MT-ATP8P03928 68 aa7□□□□□ -1.29
CTSA-211ENST00000606066 OCR1Q9BZK8 76 aa7□□□□□ -1.29
CTSA-211ENST00000606066 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.99□□□□□ -1.29
CTSA-211ENST00000606066 MP68P56378 58 aa6.98□□□□□ -1.29
CTSA-211ENST00000606066 C5orf47Q569G3 176 aa6.97□□□□□ -1.29
CTSA-211ENST00000606066 C1orf64Q8NEQ6 169 aa6.96□□□□□ -1.3
CTSA-211ENST00000606066 LINC00208Q96KT6 92 aa6.94□□□□□ -1.3
CTSA-211ENST00000606066 FCGBPQ9Y6R7 5405 aaPredicted RBP6.93□□□□□ -1.3
CTSA-211ENST00000606066 H3BPC8 53 aa6.91□□□□□ -1.3
CTSA-211ENST00000606066 FAM236AA0A1B0GUQ0 79 aa6.9□□□□□ -1.3
CTSA-211ENST00000606066 FAM236BA0A1B0GV22 79 aa6.9□□□□□ -1.3
CTSA-211ENST00000606066 SMIM20Q8N5G0 67 aa6.9□□□□□ -1.3
CTSA-211ENST00000606066 KRTAP9-8Q9BYQ0 159 aa6.9□□□□□ -1.3
CTSA-211ENST00000606066 KRTAP3-1Q9BYR8 98 aa6.9□□□□□ -1.3
CTSA-211ENST00000606066 S4R3F8 94 aa6.85□□□□□ -1.31
CTSA-211ENST00000606066 TRAV7A0A075B6U4 112 aa6.84□□□□□ -1.31
CTSA-211ENST00000606066 KLKP1Q107X0 134 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 177.2 ms