RNA–Protein interactions for RNA: ENST00000604213.1

LYSMD4-211, Transcript of LysM domain containing 4, humanhuman

TSL 1 (best)

Gene LYSMD4, Length 2,356 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-211ENST00000604213 RBM12B-AS1Q9P1G2 102 aa9.08□□□□□ -0.96
LYSMD4-211ENST00000604213 NBDYA0A0U1RRE5 68 aa9.07□□□□□ -0.96
LYSMD4-211ENST00000604213 ZNF706Q9Y5V0 76 aaPredicted RBP9.07□□□□□ -0.96
LYSMD4-211ENST00000604213 KRTAP21-3Q3LHN1 58 aa9.05□□□□□ -0.96
LYSMD4-211ENST00000604213 ANAPC11Q9NYG5 84 aa9.05□□□□□ -0.96
LYSMD4-211ENST00000604213 PLECQ15149 4684 aaKnown RBP9.05□□□□□ -0.96
LYSMD4-211ENST00000604213 DNAH8Q96JB1 4490 aa9.04□□□□□ -0.96
LYSMD4-211ENST00000604213 KRTAP13-3Q3SY46 172 aa9.04□□□□□ -0.96
LYSMD4-211ENST00000604213 Q5W150 140 aa9.04□□□□□ -0.96
LYSMD4-211ENST00000604213 PRR26Q8N8Z3 221 aa9.02□□□□□ -0.96
LYSMD4-211ENST00000604213 ALMS1Q8TCU4 4167 aa9.02□□□□□ -0.97
LYSMD4-211ENST00000604213 PSORS1C2Q9UIG4 136 aa9.02□□□□□ -0.97
LYSMD4-211ENST00000604213 C7orf65Q6ZTY9 151 aa9.01□□□□□ -0.97
LYSMD4-211ENST00000604213 MDFIQ99750 246 aa9.01□□□□□ -0.97
LYSMD4-211ENST00000604213 IGLV5-52A0A0A0MRZ9 124 aa9□□□□□ -0.97
LYSMD4-211ENST00000604213 HECTD4Q9Y4D8 3996 aa8.98□□□□□ -0.97
LYSMD4-211ENST00000604213 FRAS1Q86XX4 4008 aa8.98□□□□□ -0.97
LYSMD4-211ENST00000604213 MGAM2Q2M2H8 2515 aa8.97□□□□□ -0.97
LYSMD4-211ENST00000604213 ZNF861PO60384 105 aa8.97□□□□□ -0.97
LYSMD4-211ENST00000604213 SPINK6Q6UWN8 80 aa8.96□□□□□ -0.98
LYSMD4-211ENST00000604213 ACYP2P14621 99 aa8.94□□□□□ -0.98
LYSMD4-211ENST00000604213 A0A087WTM6 91 aa8.93□□□□□ -0.98
LYSMD4-211ENST00000604213 VPS13DQ5THJ4 4388 aa8.93□□□□□ -0.98
LYSMD4-211ENST00000604213 FBN3Q75N90 2809 aa8.9□□□□□ -0.98
LYSMD4-211ENST00000604213 RTL8CO15255 209 aa8.9□□□□□ -0.99
LYSMD4-211ENST00000604213 DMAC1Q96GE9 116 aa8.9□□□□□ -0.99
LYSMD4-211ENST00000604213 DNAH17Q9UFH2 4485 aa8.89□□□□□ -0.99
LYSMD4-211ENST00000604213 DNHD1Q96M86 4753 aa8.88□□□□□ -0.99
LYSMD4-211ENST00000604213 C8orf87E5RJ46 101 aa8.87□□□□□ -0.99
LYSMD4-211ENST00000604213 CIRBP-AS1Q8TBR5 109 aa8.87□□□□□ -0.99
LYSMD4-211ENST00000604213 NUPR2A6NF83 97 aa8.86□□□□□ -0.99
LYSMD4-211ENST00000604213 IGLV7-43P04211 117 aa8.83□□□□□ -1
LYSMD4-211ENST00000604213 STARD9Q9P2P6 4700 aa8.82□□□□□ -1
LYSMD4-211ENST00000604213 LINC00313P59037 77 aa8.81□□□□□ -1
LYSMD4-211ENST00000604213 DNAH2Q9P225 4427 aa8.81□□□□□ -1
LYSMD4-211ENST00000604213 FAM229AH3BQW9 127 aa8.8□□□□□ -1
LYSMD4-211ENST00000604213 A0A1B0GU69 56 aa8.8□□□□□ -1
LYSMD4-211ENST00000604213 SSBP3-AS1Q7Z2R9 100 aa8.8□□□□□ -1
LYSMD4-211ENST00000604213 IGKV2-30P06310 120 aa8.79□□□□□ -1
LYSMD4-211ENST00000604213 RETNLBQ9BQ08 111 aa8.79□□□□□ -1
LYSMD4-211ENST00000604213 SPATA8Q6RVD6 105 aa8.77□□□□□ -1.01
LYSMD4-211ENST00000604213 PRKDCP78527 4128 aaKnown RBP8.77□□□□□ -1.01
LYSMD4-211ENST00000604213 PRAC1Q96KF2 57 aa8.77□□□□□ -1.01
LYSMD4-211ENST00000604213 PLA2G1BP04054 148 aaKnown RBP8.74□□□□□ -1.01
LYSMD4-211ENST00000604213 KMT2AQ03164 3969 aa8.74□□□□□ -1.01
LYSMD4-211ENST00000604213 ADM2Q7Z4H4 148 aa8.73□□□□□ -1.01
LYSMD4-211ENST00000604213 KRTAP16-1A8MUX0 517 aa8.71□□□□□ -1.01
LYSMD4-211ENST00000604213 MIR22HGQ0VDD5 57 aa8.69□□□□□ -1.02
LYSMD4-211ENST00000604213 DNAH11Q96DT5 4516 aa8.69□□□□□ -1.02
LYSMD4-211ENST00000604213 UQCR11O14957 56 aa8.68□□□□□ -1.02
LYSMD4-211ENST00000604213 KRTAP13-2Q52LG2 175 aa8.67□□□□□ -1.02
LYSMD4-211ENST00000604213 MEGF8Q7Z7M0 2845 aa8.66□□□□□ -1.02
LYSMD4-211ENST00000604213 IGKV2D-30A0A075B6S6 120 aa8.63□□□□□ -1.03
LYSMD4-211ENST00000604213 C1orf134Q5TEV5 83 aa8.62□□□□□ -1.03
LYSMD4-211ENST00000604213 DNAH6Q9C0G6 4158 aa8.62□□□□□ -1.03
LYSMD4-211ENST00000604213 TGP01266 2768 aa8.61□□□□□ -1.03
LYSMD4-211ENST00000604213 DNAH5Q8TE73 4624 aa8.6□□□□□ -1.03
LYSMD4-211ENST00000604213 LINC01554Q52M75 96 aa8.56□□□□□ -1.04
LYSMD4-211ENST00000604213 KRTAP10-2P60368 255 aa8.53□□□□□ -1.04
LYSMD4-211ENST00000604213 LRP1BQ9NZR2 4599 aa8.53□□□□□ -1.04
LYSMD4-211ENST00000604213 KRTAP1-4P0C5Y4 121 aa8.51□□□□□ -1.05
LYSMD4-211ENST00000604213 SPINK1P00995 79 aa8.48□□□□□ -1.05
LYSMD4-211ENST00000604213 CSAG1Q6PB30 78 aa8.47□□□□□ -1.05
LYSMD4-211ENST00000604213 Q8N1X5 172 aa8.46□□□□□ -1.06
LYSMD4-211ENST00000604213 Q6ZSA8 131 aa8.45□□□□□ -1.06
LYSMD4-211ENST00000604213 LY6G6CO95867 125 aa8.44□□□□□ -1.06
LYSMD4-211ENST00000604213 KRTAP10-1P60331 282 aa8.43□□□□□ -1.06
LYSMD4-211ENST00000604213 C4orf48Q5BLP8 95 aa8.42□□□□□ -1.06
LYSMD4-211ENST00000604213 PKD1P98161 4303 aa8.41□□□□□ -1.06
LYSMD4-211ENST00000604213 VPS13BQ7Z7G8 4022 aa8.41□□□□□ -1.06
LYSMD4-211ENST00000604213 TYMSOSQ8TAI1 123 aa8.39□□□□□ -1.07
LYSMD4-211ENST00000604213 H0YAA0 97 aa8.36□□□□□ -1.07
LYSMD4-211ENST00000604213 FAT2Q9NYQ8 4349 aa8.33□□□□□ -1.08
LYSMD4-211ENST00000604213 A8MUU9 505 aa8.32□□□□□ -1.08
LYSMD4-211ENST00000604213 KRTAP3-1Q9BYR8 98 aa8.27□□□□□ -1.09
LYSMD4-211ENST00000604213 LINC00304Q8N9R0 145 aa8.26□□□□□ -1.09
LYSMD4-211ENST00000604213 A0A1B0GU33 70 aa8.26□□□□□ -1.09
LYSMD4-211ENST00000604213 SACSQ9NZJ4 4579 aa8.26□□□□□ -1.09
LYSMD4-211ENST00000604213 RPS29P62273 56 aaKnown RBP8.25□□□□□ -1.09
LYSMD4-211ENST00000604213 HYDINQ4G0P3 5121 aa8.24□□□□□ -1.09
LYSMD4-211ENST00000604213 H1FX-AS1Q4G0G2 97 aa8.22□□□□□ -1.09
LYSMD4-211ENST00000604213 KRTAP25-1Q3LHN0 102 aa8.21□□□□□ -1.09
LYSMD4-211ENST00000604213 C20orf166-AS1Q96NR2 134 aa8.21□□□□□ -1.09
LYSMD4-211ENST00000604213 C9orf92A6NGG3 77 aa8.19□□□□□ -1.1
LYSMD4-211ENST00000604213 H3BS24 57 aa8.15□□□□□ -1.1
LYSMD4-211ENST00000604213 PKHD1L1Q86WI1 4243 aa8.12□□□□□ -1.11
LYSMD4-211ENST00000604213 PKHD1P08F94 4074 aa8.07□□□□□ -1.12
LYSMD4-211ENST00000604213 COX6B2Q6YFQ2 88 aa8.07□□□□□ -1.12
LYSMD4-211ENST00000604213 ROMO1P60602 79 aa8.04□□□□□ -1.12
LYSMD4-211ENST00000604213 K7ERS5 55 aa8.03□□□□□ -1.12
LYSMD4-211ENST00000604213 FLG2Q5D862 2391 aaPredicted RBP8.02□□□□□ -1.13
LYSMD4-211ENST00000604213 APOBP04114 4563 aaKnown RBP8.01□□□□□ -1.13
LYSMD4-211ENST00000604213 CRIPTQ9P021 101 aa8.01□□□□□ -1.13
LYSMD4-211ENST00000604213 SMR3BP02814 79 aaPredicted RBP8□□□□□ -1.13
LYSMD4-211ENST00000604213 DYNC1H1Q14204 4646 aaKnown RBP8□□□□□ -1.13
LYSMD4-211ENST00000604213 FAT1Q14517 4588 aa7.96□□□□□ -1.14
LYSMD4-211ENST00000604213 LCE2DQ5TA82 110 aaPredicted RBP7.94□□□□□ -1.14
LYSMD4-211ENST00000604213 KRTAP10-4P60372 401 aaPredicted RBP7.93□□□□□ -1.14
LYSMD4-211ENST00000604213 KRTAP10-6P60371 365 aaPredicted RBP7.92□□□□□ -1.14
LYSMD4-211ENST00000604213 KRTAP3-3Q9BYR6 98 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms