RNA–Protein interactions for RNA: ENST00000602716.5

PPFIA3-207, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 2,020 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-207ENST00000602716 DEFB116Q30KQ4 102 aa10.26□□□□□ -0.77
PPFIA3-207ENST00000602716 BIRC6Q9NR09 4857 aa10.25□□□□□ -0.77
PPFIA3-207ENST00000602716 FAM229AH3BQW9 127 aa10.25□□□□□ -0.77
PPFIA3-207ENST00000602716 ZCCHC13Q8WW36 166 aaKnown RBP10.25□□□□□ -0.77
PPFIA3-207ENST00000602716 KRTAP13-2Q52LG2 175 aa10.24□□□□□ -0.77
PPFIA3-207ENST00000602716 PLA2G1BP04054 148 aaKnown RBP10.24□□□□□ -0.77
PPFIA3-207ENST00000602716 Q8N1X5 172 aa10.19□□□□□ -0.78
PPFIA3-207ENST00000602716 FAM229BQ4G0N7 80 aa10.18□□□□□ -0.78
PPFIA3-207ENST00000602716 WFDC13Q8IUB5 93 aa10.18□□□□□ -0.78
PPFIA3-207ENST00000602716 KRTAP29-1A8MX34 341 aaPredicted RBP10.16□□□□□ -0.78
PPFIA3-207ENST00000602716 PRR26Q8N8Z3 221 aa10.16□□□□□ -0.78
PPFIA3-207ENST00000602716 LINC00472Q9H8W2 130 aa10.16□□□□□ -0.78
PPFIA3-207ENST00000602716 KRTAP4-5Q9BYR2 181 aa10.14□□□□□ -0.79
PPFIA3-207ENST00000602716 PRR15Q8IV56 129 aa10.14□□□□□ -0.79
PPFIA3-207ENST00000602716 LRP1Q07954 4544 aaKnown RBP10.13□□□□□ -0.79
PPFIA3-207ENST00000602716 A8MWP4 228 aa10.12□□□□□ -0.79
PPFIA3-207ENST00000602716 hDV103S1A0JD37 113 aa10.11□□□□□ -0.79
PPFIA3-207ENST00000602716 HERC2O95714 4834 aa10.1□□□□□ -0.79
PPFIA3-207ENST00000602716 CASC2Q6XLA1 102 aa10.1□□□□□ -0.79
PPFIA3-207ENST00000602716 V9GYY9 64 aa10.1□□□□□ -0.79
PPFIA3-207ENST00000602716 C1orf195Q5TG92 126 aa10.09□□□□□ -0.79
PPFIA3-207ENST00000602716 MP68P56378 58 aa10.09□□□□□ -0.79
PPFIA3-207ENST00000602716 TYMSOSQ8TAI1 123 aa10.07□□□□□ -0.8
PPFIA3-207ENST00000602716 FAT3Q8TDW7 4589 aa10.07□□□□□ -0.8
PPFIA3-207ENST00000602716 SSBP3-AS1Q7Z2R9 100 aa10.07□□□□□ -0.8
PPFIA3-207ENST00000602716 C1orf64Q8NEQ6 169 aa10.07□□□□□ -0.8
PPFIA3-207ENST00000602716 NDUFB1O75438 58 aa10.06□□□□□ -0.8
PPFIA3-207ENST00000602716 SEC61GP60059 68 aa10.06□□□□□ -0.8
PPFIA3-207ENST00000602716 CYP4F30PQ9H0H9 118 aa10.06□□□□□ -0.8
PPFIA3-207ENST00000602716 MYCBP2O75592 4640 aa10.06□□□□□ -0.8
PPFIA3-207ENST00000602716 MPLKIPQ8TAP9 179 aa10.06□□□□□ -0.8
PPFIA3-207ENST00000602716 TRAV22A0A0B4J277 110 aa10.05□□□□□ -0.8
PPFIA3-207ENST00000602716 FLG2Q5D862 2391 aaPredicted RBP10.04□□□□□ -0.8
PPFIA3-207ENST00000602716 BRK1Q8WUW1 75 aa10.04□□□□□ -0.8
PPFIA3-207ENST00000602716 LINC00208Q96KT6 92 aa10.03□□□□□ -0.8
PPFIA3-207ENST00000602716 ABCA13Q86UQ4 5058 aa10.03□□□□□ -0.8
PPFIA3-207ENST00000602716 H0Y9P7 68 aa10.02□□□□□ -0.8
PPFIA3-207ENST00000602716 MMP24-AS1A0A0U1RRL7 71 aa10.02□□□□□ -0.81
PPFIA3-207ENST00000602716 H3BPC8 53 aa10.02□□□□□ -0.81
PPFIA3-207ENST00000602716 TNXBP22105 4242 aa10.02□□□□□ -0.81
PPFIA3-207ENST00000602716 Q96NJ1 140 aa10□□□□□ -0.81
PPFIA3-207ENST00000602716 PRR4Q16378 134 aa10□□□□□ -0.81
PPFIA3-207ENST00000602716 CD164Q04900 197 aa9.97□□□□□ -0.81
PPFIA3-207ENST00000602716 LINC00304Q8N9R0 145 aa9.96□□□□□ -0.81
PPFIA3-207ENST00000602716 SPANXA2-OT1Q8N9U9 137 aa9.95□□□□□ -0.82
PPFIA3-207ENST00000602716 KRTAP10-8P60410 259 aa9.94□□□□□ -0.82
PPFIA3-207ENST00000602716 Q1T7F1 81 aa9.94□□□□□ -0.82
PPFIA3-207ENST00000602716 ASB16-AS1Q495Z4 193 aa9.94□□□□□ -0.82
PPFIA3-207ENST00000602716 MT1HL1P0DM35 61 aa9.92□□□□□ -0.82
PPFIA3-207ENST00000602716 C8orf17Q9NRJ1 99 aa9.89□□□□□ -0.83
PPFIA3-207ENST00000602716 C4orf48Q5BLP8 95 aa9.89□□□□□ -0.83
PPFIA3-207ENST00000602716 TP53AIP1Q9HCN2 124 aa9.87□□□□□ -0.83
PPFIA3-207ENST00000602716 SPINK1P00995 79 aa9.87□□□□□ -0.83
PPFIA3-207ENST00000602716 A0A1B0GVX0 72 aa9.86□□□□□ -0.83
PPFIA3-207ENST00000602716 PMAIP1Q13794 54 aa9.84□□□□□ -0.83
PPFIA3-207ENST00000602716 IGHV6-1A0A0B4J1U7 121 aa9.83□□□□□ -0.84
PPFIA3-207ENST00000602716 SPAG11AQ6PDA7 123 aa9.83□□□□□ -0.84
PPFIA3-207ENST00000602716 LIMD2Q9BT23 127 aa9.83□□□□□ -0.84
PPFIA3-207ENST00000602716 RPS29P62273 56 aaKnown RBP9.8□□□□□ -0.84
PPFIA3-207ENST00000602716 IGLV7-46A0A075B6I9 117 aa9.8□□□□□ -0.84
PPFIA3-207ENST00000602716 RETNLBQ9BQ08 111 aa9.79□□□□□ -0.84
PPFIA3-207ENST00000602716 PSPHP1O15172 72 aa9.78□□□□□ -0.84
PPFIA3-207ENST00000602716 MRPL34Q9BQ48 92 aaKnown RBP9.77□□□□□ -0.85
PPFIA3-207ENST00000602716 NOTCH2NLQ7Z3S9 236 aa9.77□□□□□ -0.85
PPFIA3-207ENST00000602716 NDUFS5O43920 106 aa9.76□□□□□ -0.85
PPFIA3-207ENST00000602716 PCOTHQ58A44 107 aa9.75□□□□□ -0.85
PPFIA3-207ENST00000602716 PCLOQ9Y6V0 5065 aa9.74□□□□□ -0.85
PPFIA3-207ENST00000602716 COA5Q86WW8 74 aa9.73□□□□□ -0.85
PPFIA3-207ENST00000602716 DMBT1Q9UGM3 2413 aaPredicted RBP9.72□□□□□ -0.85
PPFIA3-207ENST00000602716 Q8N9P0 234 aaPredicted RBP9.72□□□□□ -0.85
PPFIA3-207ENST00000602716 A8MUN3 132 aa9.72□□□□□ -0.85
PPFIA3-207ENST00000602716 Q5VV11 94 aa9.68□□□□□ -0.86
PPFIA3-207ENST00000602716 KRTAP13-3Q3SY46 172 aa9.63□□□□□ -0.87
PPFIA3-207ENST00000602716 J3QL48 77 aa9.63□□□□□ -0.87
PPFIA3-207ENST00000602716 LOC101927531A0A1B0GV80 90 aa9.62□□□□□ -0.87
PPFIA3-207ENST00000602716 Q5W150 140 aa9.62□□□□□ -0.87
PPFIA3-207ENST00000602716 PRR15LQ9BU68 103 aa9.61□□□□□ -0.87
PPFIA3-207ENST00000602716 C8orf87E5RJ46 101 aa9.6□□□□□ -0.87
PPFIA3-207ENST00000602716 HRES1P13985 223 aa9.58□□□□□ -0.88
PPFIA3-207ENST00000602716 CHKB-CPT1BH3BT56 60 aa9.56□□□□□ -0.88
PPFIA3-207ENST00000602716 C9orf92A6NGG3 77 aa9.56□□□□□ -0.88
PPFIA3-207ENST00000602716 Q75L30 129 aa9.55□□□□□ -0.88
PPFIA3-207ENST00000602716 KRTAP16-1A8MUX0 517 aa9.55□□□□□ -0.88
PPFIA3-207ENST00000602716 LINC00313P59037 77 aa9.53□□□□□ -0.88
PPFIA3-207ENST00000602716 LINC01558Q9Y6Z2 57 aa9.52□□□□□ -0.89
PPFIA3-207ENST00000602716 KTN1-AS1Q86SY8 53 aa9.51□□□□□ -0.89
PPFIA3-207ENST00000602716 A8MU10 97 aa9.51□□□□□ -0.89
PPFIA3-207ENST00000602716 HERC1Q15751 4861 aa9.46□□□□□ -0.89
PPFIA3-207ENST00000602716 ATP11AUNQ6ZP68 121 aa9.46□□□□□ -0.9
PPFIA3-207ENST00000602716 A6NED7 52 aa9.43□□□□□ -0.9
PPFIA3-207ENST00000602716 LPAP08519 4548 aa9.43□□□□□ -0.9
PPFIA3-207ENST00000602716 LCA10Q71F78 164 aa9.43□□□□□ -0.9
PPFIA3-207ENST00000602716 ACYP2P14621 99 aa9.41□□□□□ -0.9
PPFIA3-207ENST00000602716 DMAC1Q96GE9 116 aa9.4□□□□□ -0.9
PPFIA3-207ENST00000602716 RBM12B-AS1Q9P1G2 102 aa9.4□□□□□ -0.9
PPFIA3-207ENST00000602716 IGKV2-30P06310 120 aa9.39□□□□□ -0.91
PPFIA3-207ENST00000602716 XP32Q5T750 250 aa9.36□□□□□ -0.91
PPFIA3-207ENST00000602716 CDC42SE1Q9NRR8 79 aa9.36□□□□□ -0.91
PPFIA3-207ENST00000602716 A6NN06 94 aa9.36□□□□□ -0.91
PPFIA3-207ENST00000602716 C20orf166-AS1Q96NR2 134 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms