RNA–Protein interactions for RNA: ENST00000601592.5

USE1-209, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 3

Gene USE1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-209ENST00000601592 A8MUU9 505 aa6.76□□□□□ -1.33
USE1-209ENST00000601592 LCE2AQ5TA79 106 aaPredicted RBP6.76□□□□□ -1.33
USE1-209ENST00000601592 NOTCH2NLQ7Z3S9 236 aa6.76□□□□□ -1.33
USE1-209ENST00000601592 A0A1B0GVX0 72 aa6.75□□□□□ -1.33
USE1-209ENST00000601592 J3KT08 172 aa6.75□□□□□ -1.33
USE1-209ENST00000601592 A0A1B0GW54 56 aa6.74□□□□□ -1.33
USE1-209ENST00000601592 C8orf87E5RJ46 101 aa6.73□□□□□ -1.33
USE1-209ENST00000601592 KRTAP16-1A8MUX0 517 aa6.72□□□□□ -1.33
USE1-209ENST00000601592 NDUFB1O75438 58 aa6.72□□□□□ -1.33
USE1-209ENST00000601592 NREPQ16612 68 aa6.71□□□□□ -1.34
USE1-209ENST00000601592 K7EP34 96 aa6.7□□□□□ -1.34
USE1-209ENST00000601592 COX6B2Q6YFQ2 88 aa6.7□□□□□ -1.34
USE1-209ENST00000601592 SMCPP49901 116 aaPredicted RBP6.69□□□□□ -1.34
USE1-209ENST00000601592 A8MWP4 228 aa6.68□□□□□ -1.34
USE1-209ENST00000601592 KRTAP19-2Q3LHN2 52 aa6.68□□□□□ -1.34
USE1-209ENST00000601592 LCE2CQ5TA81 110 aa6.67□□□□□ -1.34
USE1-209ENST00000601592 IGKV3D-7A0A0C4DH55 119 aa6.66□□□□□ -1.34
USE1-209ENST00000601592 GTF2H5Q6ZYL4 71 aa6.66□□□□□ -1.34
USE1-209ENST00000601592 C8orf17Q9NRJ1 99 aa6.65□□□□□ -1.34
USE1-209ENST00000601592 PRO0461Q9UI25 63 aa6.65□□□□□ -1.34
USE1-209ENST00000601592 PRR15Q8IV56 129 aa6.62□□□□□ -1.35
USE1-209ENST00000601592 BPY2O14599 106 aa6.61□□□□□ -1.35
USE1-209ENST00000601592 MT1HP80294 61 aa6.61□□□□□ -1.35
USE1-209ENST00000601592 Q6ZVQ6 151 aa6.6□□□□□ -1.35
USE1-209ENST00000601592 K7EQZ3 153 aa6.59□□□□□ -1.35
USE1-209ENST00000601592 M0R2T5 61 aa6.58□□□□□ -1.36
USE1-209ENST00000601592 ZCCHC13Q8WW36 166 aaKnown RBP6.58□□□□□ -1.36
USE1-209ENST00000601592 MMP24-AS1A0A0U1RRL7 71 aa6.57□□□□□ -1.36
USE1-209ENST00000601592 F8W1H4 67 aa6.57□□□□□ -1.36
USE1-209ENST00000601592 Q8N9P0 234 aaPredicted RBP6.57□□□□□ -1.36
USE1-209ENST00000601592 UBL5Q9BZL1 73 aa6.56□□□□□ -1.36
USE1-209ENST00000601592 FAM236DA0A1B0GTK5 79 aa6.55□□□□□ -1.36
USE1-209ENST00000601592 hDV103S1A0JD37 113 aa6.55□□□□□ -1.36
USE1-209ENST00000601592 FAM236CP0DP71 79 aa6.55□□□□□ -1.36
USE1-209ENST00000601592 ETDBQ3ZM63 59 aa6.55□□□□□ -1.36
USE1-209ENST00000601592 TMEM254Q8TBM7 123 aa6.55□□□□□ -1.36
USE1-209ENST00000601592 LINC00846Q9NV44 126 aa6.55□□□□□ -1.36
USE1-209ENST00000601592 NDUFS5O43920 106 aa6.54□□□□□ -1.36
USE1-209ENST00000601592 Q8N9L7 120 aa6.54□□□□□ -1.36
USE1-209ENST00000601592 MRPL34Q9BQ48 92 aaKnown RBP6.54□□□□□ -1.36
USE1-209ENST00000601592 WFDC13Q8IUB5 93 aa6.52□□□□□ -1.37
USE1-209ENST00000601592 RBM12B-AS1Q9P1G2 102 aa6.52□□□□□ -1.37
USE1-209ENST00000601592 HRES1P13985 223 aa6.5□□□□□ -1.37
USE1-209ENST00000601592 SPINK7P58062 85 aa6.49□□□□□ -1.37
USE1-209ENST00000601592 KRTAP9-2Q9BYQ4 174 aa6.49□□□□□ -1.37
USE1-209ENST00000601592 FLGP20930 4061 aaPredicted RBP6.48□□□□□ -1.37
USE1-209ENST00000601592 CASC2Q6XLA1 102 aa6.48□□□□□ -1.37
USE1-209ENST00000601592 KRTAP10-6P60371 365 aaPredicted RBP6.46□□□□□ -1.38
USE1-209ENST00000601592 HCG22E2RYF7 251 aa6.44□□□□□ -1.38
USE1-209ENST00000601592 MPLKIPQ8TAP9 179 aa6.44□□□□□ -1.38
USE1-209ENST00000601592 LORP23490 312 aaPredicted RBP6.43□□□□□ -1.38
USE1-209ENST00000601592 A0A1B0GV90 55 aa6.4□□□□□ -1.38
USE1-209ENST00000601592 CXCL6P80162 114 aa6.4□□□□□ -1.38
USE1-209ENST00000601592 IGKV2D-30A0A075B6S6 120 aa6.39□□□□□ -1.39
USE1-209ENST00000601592 IGKV2-30P06310 120 aa6.39□□□□□ -1.39
USE1-209ENST00000601592 Q5W150 140 aa6.39□□□□□ -1.39
USE1-209ENST00000601592 ACYP1P07311 99 aa6.37□□□□□ -1.39
USE1-209ENST00000601592 C7orf65Q6ZTY9 151 aa6.36□□□□□ -1.39
USE1-209ENST00000601592 LCE2DQ5TA82 110 aaPredicted RBP6.35□□□□□ -1.39
USE1-209ENST00000601592 FAM240AA0A1B0GVK7 77 aa6.34□□□□□ -1.39
USE1-209ENST00000601592 ATP5EP2Q5VTU8 51 aa6.3□□□□□ -1.4
USE1-209ENST00000601592 HIST1H4AP62805 103 aaKnown RBP6.29□□□□□ -1.4
USE1-209ENST00000601592 TP53AIP1Q9HCN2 124 aa6.28□□□□□ -1.4
USE1-209ENST00000601592 KRTAP9-8Q9BYQ0 159 aa6.26□□□□□ -1.41
USE1-209ENST00000601592 C4orf26Q17RF5 130 aa6.25□□□□□ -1.41
USE1-209ENST00000601592 H1FX-AS1Q4G0G2 97 aa6.25□□□□□ -1.41
USE1-209ENST00000601592 KRTAP9-6A0A140TA67 174 aa6.23□□□□□ -1.41
USE1-209ENST00000601592 LINC00643Q86TS7 51 aa6.23□□□□□ -1.41
USE1-209ENST00000601592 MT2AP02795 61 aa6.21□□□□□ -1.42
USE1-209ENST00000601592 J3QR89 54 aa6.2□□□□□ -1.42
USE1-209ENST00000601592 A0A087WVE0 104 aa6.19□□□□□ -1.42
USE1-209ENST00000601592 TRAV22A0A0B4J277 110 aa6.18□□□□□ -1.42
USE1-209ENST00000601592 KRTAP10-10P60014 251 aa6.18□□□□□ -1.42
USE1-209ENST00000601592 MT1FP04733 61 aa6.17□□□□□ -1.42
USE1-209ENST00000601592 CRCT1Q9UGL9 99 aa6.16□□□□□ -1.42
USE1-209ENST00000601592 UQCRQO14949 82 aa6.14□□□□□ -1.43
USE1-209ENST00000601592 C1orf64Q8NEQ6 169 aa6.14□□□□□ -1.43
USE1-209ENST00000601592 H0Y9P7 68 aa6.13□□□□□ -1.43
USE1-209ENST00000601592 CYP4F30PQ9H0H9 118 aa6.13□□□□□ -1.43
USE1-209ENST00000601592 FSIP2Q5CZC0 6907 aa6.12□□□□□ -1.43
USE1-209ENST00000601592 LOC101927531A0A1B0GV80 90 aa6.12□□□□□ -1.43
USE1-209ENST00000601592 S4R3F8 94 aa6.1□□□□□ -1.43
USE1-209ENST00000601592 ATOX1O00244 68 aa6.09□□□□□ -1.43
USE1-209ENST00000601592 KRTAP3-1Q9BYR8 98 aa6.09□□□□□ -1.43
USE1-209ENST00000601592 C5orf47Q569G3 176 aa6.08□□□□□ -1.44
USE1-209ENST00000601592 KRTAP9-3Q9BYQ3 159 aa6.05□□□□□ -1.44
USE1-209ENST00000601592 LINC00208Q96KT6 92 aa6.04□□□□□ -1.44
USE1-209ENST00000601592 K7ERU9 68 aa6.03□□□□□ -1.44
USE1-209ENST00000601592 MP68P56378 58 aa6.03□□□□□ -1.44
USE1-209ENST00000601592 LCA10Q71F78 164 aa6.03□□□□□ -1.44
USE1-209ENST00000601592 OCR1Q9BZK8 76 aa6.03□□□□□ -1.44
USE1-209ENST00000601592 SCGB1A1P11684 91 aa6.02□□□□□ -1.45
USE1-209ENST00000601592 LCE2BO14633 110 aa6.01□□□□□ -1.45
USE1-209ENST00000601592 CSAG1Q6PB30 78 aa6.01□□□□□ -1.45
USE1-209ENST00000601592 FAM236AA0A1B0GUQ0 79 aa5.99□□□□□ -1.45
USE1-209ENST00000601592 FAM236BA0A1B0GV22 79 aa5.99□□□□□ -1.45
USE1-209ENST00000601592 MT-ATP8P03928 68 aa5.96□□□□□ -1.46
USE1-209ENST00000601592 KLKP1Q107X0 134 aa5.96□□□□□ -1.46
USE1-209ENST00000601592 USH2AO75445 5202 aa5.96□□□□□ -1.46
USE1-209ENST00000601592 IMUPQ9GZP8 106 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms