RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 K7ERJ3 54 aa8.77□□□□□ -1.01
CHMP2A-208ENST00000601220 C8orf87E5RJ46 101 aa8.76□□□□□ -1.01
CHMP2A-208ENST00000601220 UBE2V1Q13404 147 aa8.76□□□□□ -1.01
CHMP2A-208ENST00000601220 PSMB2P49721 201 aa8.74□□□□□ -1.01
CHMP2A-208ENST00000601220 ZCCHC13Q8WW36 166 aaKnown RBP8.73□□□□□ -1.01
CHMP2A-208ENST00000601220 SPINK7P58062 85 aa8.72□□□□□ -1.01
CHMP2A-208ENST00000601220 HSD52Q0P140 79 aa8.72□□□□□ -1.01
CHMP2A-208ENST00000601220 COX6CP09669 75 aa8.7□□□□□ -1.02
CHMP2A-208ENST00000601220 MTURNQ8N3F0 131 aa8.7□□□□□ -1.02
CHMP2A-208ENST00000601220 KRTAP19-6Q3LI70 58 aa8.69□□□□□ -1.02
CHMP2A-208ENST00000601220 RBM3P98179 157 aaKnown RBP8.68□□□□□ -1.02
CHMP2A-208ENST00000601220 VPS25Q9BRG1 176 aa8.68□□□□□ -1.02
CHMP2A-208ENST00000601220 Q8N9P0 234 aaPredicted RBP8.67□□□□□ -1.02
CHMP2A-208ENST00000601220 J3KT08 172 aa8.64□□□□□ -1.03
CHMP2A-208ENST00000601220 PYY3Q5JQD4 70 aa8.64□□□□□ -1.03
CHMP2A-208ENST00000601220 DSCR8Q96T75 97 aa8.64□□□□□ -1.03
CHMP2A-208ENST00000601220 Q6ZQT0 140 aa8.63□□□□□ -1.03
CHMP2A-208ENST00000601220 A8MWP4 228 aa8.6□□□□□ -1.03
CHMP2A-208ENST00000601220 C21orf62-AS1Q17RA5 79 aa8.59□□□□□ -1.03
CHMP2A-208ENST00000601220 C9JAW5 83 aa8.58□□□□□ -1.04
CHMP2A-208ENST00000601220 BAALC-AS2P0C853 105 aa8.58□□□□□ -1.04
CHMP2A-208ENST00000601220 WFDC13Q8IUB5 93 aa8.58□□□□□ -1.04
CHMP2A-208ENST00000601220 SCGB1C2P0DMR2 95 aa8.57□□□□□ -1.04
CHMP2A-208ENST00000601220 C8orf17Q9NRJ1 99 aa8.57□□□□□ -1.04
CHMP2A-208ENST00000601220 LINC00846Q9NV44 126 aa8.57□□□□□ -1.04
CHMP2A-208ENST00000601220 NDUFB1O75438 58 aa8.55□□□□□ -1.04
CHMP2A-208ENST00000601220 IGKV3D-7A0A0C4DH55 119 aa8.54□□□□□ -1.04
CHMP2A-208ENST00000601220 UQCR10Q9UDW1 63 aa8.54□□□□□ -1.04
CHMP2A-208ENST00000601220 LOC110117498A0A087WWA1 95 aa8.49□□□□□ -1.05
CHMP2A-208ENST00000601220 A0A1B0GW54 56 aa8.49□□□□□ -1.05
CHMP2A-208ENST00000601220 Q6ZVQ6 151 aa8.49□□□□□ -1.05
CHMP2A-208ENST00000601220 LYRM7Q5U5X0 104 aa8.48□□□□□ -1.05
CHMP2A-208ENST00000601220 PRR15Q8IV56 129 aa8.46□□□□□ -1.06
CHMP2A-208ENST00000601220 JMJD7-PLA2G4BH0Y9G9 81 aa8.45□□□□□ -1.06
CHMP2A-208ENST00000601220 KRTAP6-3Q3LI67 103 aa8.44□□□□□ -1.06
CHMP2A-208ENST00000601220 H1FX-AS1Q4G0G2 97 aa8.44□□□□□ -1.06
CHMP2A-208ENST00000601220 MMP24-AS1A0A0U1RRL7 71 aa8.42□□□□□ -1.06
CHMP2A-208ENST00000601220 PDE6GP18545 87 aa8.41□□□□□ -1.06
CHMP2A-208ENST00000601220 ATXN8Q156A1 80 aa8.4□□□□□ -1.06
CHMP2A-208ENST00000601220 TMEM254Q8TBM7 123 aa8.4□□□□□ -1.06
CHMP2A-208ENST00000601220 MRPL34Q9BQ48 92 aaKnown RBP8.4□□□□□ -1.06
CHMP2A-208ENST00000601220 NAA38Q9BRA0 125 aaKnown RBP8.39□□□□□ -1.07
CHMP2A-208ENST00000601220 C14orf132Q9NPU4 83 aa8.39□□□□□ -1.07
CHMP2A-208ENST00000601220 NREPQ16612 68 aa8.36□□□□□ -1.07
CHMP2A-208ENST00000601220 hDV103S1A0JD37 113 aa8.33□□□□□ -1.08
CHMP2A-208ENST00000601220 K7EQZ3 153 aa8.32□□□□□ -1.08
CHMP2A-208ENST00000601220 Q5W150 140 aa8.31□□□□□ -1.08
CHMP2A-208ENST00000601220 TMA7Q9Y2S6 64 aaKnown RBP8.29□□□□□ -1.08
CHMP2A-208ENST00000601220 NEBP20929 6669 aa8.29□□□□□ -1.08
CHMP2A-208ENST00000601220 IGKV2D-30A0A075B6S6 120 aa8.27□□□□□ -1.09
CHMP2A-208ENST00000601220 M0R143 59 aa8.27□□□□□ -1.09
CHMP2A-208ENST00000601220 NDUFS5O43920 106 aa8.27□□□□□ -1.09
CHMP2A-208ENST00000601220 IGKV2-30P06310 120 aa8.27□□□□□ -1.09
CHMP2A-208ENST00000601220 C7orf65Q6ZTY9 151 aa8.24□□□□□ -1.09
CHMP2A-208ENST00000601220 C4orf26Q17RF5 130 aa8.19□□□□□ -1.1
CHMP2A-208ENST00000601220 MT1BP07438 61 aa8.18□□□□□ -1.1
CHMP2A-208ENST00000601220 BPY2O14599 106 aa8.17□□□□□ -1.1
CHMP2A-208ENST00000601220 KRTAP3-1Q9BYR8 98 aa8.16□□□□□ -1.1
CHMP2A-208ENST00000601220 Q8N9L7 120 aa8.15□□□□□ -1.1
CHMP2A-208ENST00000601220 MUC12Q9UKN1 5478 aa8.13□□□□□ -1.11
CHMP2A-208ENST00000601220 HCG22E2RYF7 251 aa8.13□□□□□ -1.11
CHMP2A-208ENST00000601220 H3BT86 120 aa8.13□□□□□ -1.11
CHMP2A-208ENST00000601220 CASC2Q6XLA1 102 aa8.13□□□□□ -1.11
CHMP2A-208ENST00000601220 C5orf47Q569G3 176 aa8.12□□□□□ -1.11
CHMP2A-208ENST00000601220 A6NN06 94 aa8.11□□□□□ -1.11
CHMP2A-208ENST00000601220 KRTAP19-8Q3LI54 63 aa8.11□□□□□ -1.11
CHMP2A-208ENST00000601220 SPRR2GQ9BYE4 73 aa8.1□□□□□ -1.11
CHMP2A-208ENST00000601220 CXCL6P80162 114 aa8.08□□□□□ -1.12
CHMP2A-208ENST00000601220 FAM236AA0A1B0GUQ0 79 aa8.06□□□□□ -1.12
CHMP2A-208ENST00000601220 FAM236BA0A1B0GV22 79 aa8.06□□□□□ -1.12
CHMP2A-208ENST00000601220 LOC105371267A0A1B0GV96 52 aa8.06□□□□□ -1.12
CHMP2A-208ENST00000601220 C9orf118A6NHY6 69 aa8.06□□□□□ -1.12
CHMP2A-208ENST00000601220 Q5VV11 94 aa8.06□□□□□ -1.12
CHMP2A-208ENST00000601220 BATFQ16520 125 aa8.05□□□□□ -1.12
CHMP2A-208ENST00000601220 A0A1W2PPM0 123 aa8.03□□□□□ -1.12
CHMP2A-208ENST00000601220 TAX1BP3O14907 124 aa8.03□□□□□ -1.12
CHMP2A-208ENST00000601220 KRTAP10-5P60370 271 aa8.03□□□□□ -1.12
CHMP2A-208ENST00000601220 S4R3F8 94 aa8.03□□□□□ -1.12
CHMP2A-208ENST00000601220 SMIM6P0DI80 62 aa8.02□□□□□ -1.13
CHMP2A-208ENST00000601220 CSAG1Q6PB30 78 aa8.02□□□□□ -1.13
CHMP2A-208ENST00000601220 LCA10Q71F78 164 aa8.02□□□□□ -1.13
CHMP2A-208ENST00000601220 TSTD3H0UI37 97 aa8□□□□□ -1.13
CHMP2A-208ENST00000601220 C1orf64Q8NEQ6 169 aa8□□□□□ -1.13
CHMP2A-208ENST00000601220 SMCPP49901 116 aaPredicted RBP7.96□□□□□ -1.14
CHMP2A-208ENST00000601220 KRTAP5-9P26371 169 aa7.95□□□□□ -1.14
CHMP2A-208ENST00000601220 KLKP1Q107X0 134 aa7.94□□□□□ -1.14
CHMP2A-208ENST00000601220 KRTAP3-3Q9BYR6 98 aa7.94□□□□□ -1.14
CHMP2A-208ENST00000601220 KRTAP20-1Q3LI63 56 aa7.91□□□□□ -1.14
CHMP2A-208ENST00000601220 KMT2DO14686 5537 aa7.9□□□□□ -1.14
CHMP2A-208ENST00000601220 UBL5Q9BZL1 73 aa7.88□□□□□ -1.15
CHMP2A-208ENST00000601220 MDN1Q9NU22 5596 aa7.87□□□□□ -1.15
CHMP2A-208ENST00000601220 SPCS1Q9Y6A9 102 aa7.87□□□□□ -1.15
CHMP2A-208ENST00000601220 PRO0461Q9UI25 63 aa7.85□□□□□ -1.15
CHMP2A-208ENST00000601220 TP53AIP1Q9HCN2 124 aa7.84□□□□□ -1.15
CHMP2A-208ENST00000601220 A0A087WVE0 104 aa7.81□□□□□ -1.16
CHMP2A-208ENST00000601220 CRIPTQ9P021 101 aa7.8□□□□□ -1.16
CHMP2A-208ENST00000601220 CYP4F30PQ9H0H9 118 aa7.78□□□□□ -1.16
CHMP2A-208ENST00000601220 IMUPQ9GZP8 106 aa7.71□□□□□ -1.18
CHMP2A-208ENST00000601220 K7EP34 96 aa7.69□□□□□ -1.18
CHMP2A-208ENST00000601220 H0YAA0 97 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms