RNA–Protein interactions for RNA: ENST00000600879.5

HIF3A-219, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-219ENST00000600879 TRBV7-7A0A0K0K1E9 115 aa5.31□□□□□ -1.56
HIF3A-219ENST00000600879 A0A1W2PNM2 257 aa5.31□□□□□ -1.56
HIF3A-219ENST00000600879 CCKP06307 115 aa5.31□□□□□ -1.56
HIF3A-219ENST00000600879 OBSCN-AS1Q96MR7 158 aa5.31□□□□□ -1.56
HIF3A-219ENST00000600879 LOC110117498A0A087WWA1 95 aa5.3□□□□□ -1.56
HIF3A-219ENST00000600879 Q6Q795 121 aa5.3□□□□□ -1.56
HIF3A-219ENST00000600879 PDE6GP18545 87 aa5.29□□□□□ -1.56
HIF3A-219ENST00000600879 Q6ZQT0 140 aa5.29□□□□□ -1.56
HIF3A-219ENST00000600879 A0A087WSZ3 146 aa5.28□□□□□ -1.56
HIF3A-219ENST00000600879 ETDBQ3ZM63 59 aa5.28□□□□□ -1.56
HIF3A-219ENST00000600879 C21orf62-AS1Q17RA5 79 aa5.27□□□□□ -1.57
HIF3A-219ENST00000600879 Q5XG85 94 aa5.27□□□□□ -1.57
HIF3A-219ENST00000600879 KRTAP19-1Q8IUB9 90 aa5.27□□□□□ -1.57
HIF3A-219ENST00000600879 SS18L2Q9UHA2 77 aa5.27□□□□□ -1.57
HIF3A-219ENST00000600879 SYNE2Q8WXH0 6885 aaKnown RBP5.26□□□□□ -1.57
HIF3A-219ENST00000600879 RPL37P61927 97 aaKnown RBP5.25□□□□□ -1.57
HIF3A-219ENST00000600879 MACF1Q9UPN3 7388 aaKnown RBP5.24□□□□□ -1.57
HIF3A-219ENST00000600879 A0A1B0GW54 56 aa5.23□□□□□ -1.57
HIF3A-219ENST00000600879 C1orf195Q5TG92 126 aa5.23□□□□□ -1.57
HIF3A-219ENST00000600879 KRTAP9-8Q9BYQ0 159 aa5.23□□□□□ -1.57
HIF3A-219ENST00000600879 LCE2BO14633 110 aa5.19□□□□□ -1.58
HIF3A-219ENST00000600879 Q96NJ1 140 aa5.19□□□□□ -1.58
HIF3A-219ENST00000600879 NREPQ16612 68 aa5.18□□□□□ -1.58
HIF3A-219ENST00000600879 DEFB116Q30KQ4 102 aa5.18□□□□□ -1.58
HIF3A-219ENST00000600879 LINC00472Q9H8W2 130 aa5.18□□□□□ -1.58
HIF3A-219ENST00000600879 IGKV4-1P06312 121 aa5.17□□□□□ -1.58
HIF3A-219ENST00000600879 SIGMAR1Q99720 223 aa5.17□□□□□ -1.58
HIF3A-219ENST00000600879 Q6ZVQ6 151 aa5.15□□□□□ -1.59
HIF3A-219ENST00000600879 UBL5Q9BZL1 73 aa5.15□□□□□ -1.59
HIF3A-219ENST00000600879 LINC00846Q9NV44 126 aa5.15□□□□□ -1.59
HIF3A-219ENST00000600879 J3KT08 172 aa5.14□□□□□ -1.59
HIF3A-219ENST00000600879 ACYP1P07311 99 aa5.14□□□□□ -1.59
HIF3A-219ENST00000600879 MT2AP02795 61 aa5.13□□□□□ -1.59
HIF3A-219ENST00000600879 J3QR89 54 aa5.12□□□□□ -1.59
HIF3A-219ENST00000600879 FAM240AA0A1B0GVK7 77 aa5.11□□□□□ -1.59
HIF3A-219ENST00000600879 BPY2O14599 106 aa5.11□□□□□ -1.59
HIF3A-219ENST00000600879 A0A1B0GVX0 72 aa5.1□□□□□ -1.59
HIF3A-219ENST00000600879 NDUFB1O75438 58 aa5.1□□□□□ -1.59
HIF3A-219ENST00000600879 MT1FP04733 61 aa5.1□□□□□ -1.59
HIF3A-219ENST00000600879 IGHV6-1A0A0B4J1U7 121 aa5.09□□□□□ -1.59
HIF3A-219ENST00000600879 A8MWP4 228 aa5.09□□□□□ -1.59
HIF3A-219ENST00000600879 DSCR10P59022 87 aa5.09□□□□□ -1.59
HIF3A-219ENST00000600879 ATP11AUNQ6ZP68 121 aa5.09□□□□□ -1.59
HIF3A-219ENST00000600879 IGKV3D-7A0A0C4DH55 119 aa5.07□□□□□ -1.6
HIF3A-219ENST00000600879 C8orf87E5RJ46 101 aa5.07□□□□□ -1.6
HIF3A-219ENST00000600879 LINC00313P59037 77 aa5.07□□□□□ -1.6
HIF3A-219ENST00000600879 KRTAP9-3Q9BYQ3 159 aa5.07□□□□□ -1.6
HIF3A-219ENST00000600879 K7EQZ3 153 aa5.06□□□□□ -1.6
HIF3A-219ENST00000600879 K7ERU9 68 aa5.05□□□□□ -1.6
HIF3A-219ENST00000600879 NOTCH2NLQ7Z3S9 236 aa5.05□□□□□ -1.6
HIF3A-219ENST00000600879 PRR15Q8IV56 129 aa5.05□□□□□ -1.6
HIF3A-219ENST00000600879 KRTAP10-10P60014 251 aa5.04□□□□□ -1.6
HIF3A-219ENST00000600879 CXCL6P80162 114 aa5.04□□□□□ -1.6
HIF3A-219ENST00000600879 Q75L30 129 aa5.04□□□□□ -1.6
HIF3A-219ENST00000600879 Q8N9L7 120 aa5.04□□□□□ -1.6
HIF3A-219ENST00000600879 C8orf17Q9NRJ1 99 aa5.04□□□□□ -1.6
HIF3A-219ENST00000600879 LINC00643Q86TS7 51 aa5.03□□□□□ -1.6
HIF3A-219ENST00000600879 KRTAP6-3Q3LI67 103 aa5.02□□□□□ -1.61
HIF3A-219ENST00000600879 ATP5EP2Q5VTU8 51 aa5.02□□□□□ -1.61
HIF3A-219ENST00000600879 MMP24-AS1A0A0U1RRL7 71 aa5.01□□□□□ -1.61
HIF3A-219ENST00000600879 KRTAP16-1A8MUX0 517 aa5.01□□□□□ -1.61
HIF3A-219ENST00000600879 KRTAP19-6Q3LI70 58 aa5□□□□□ -1.61
HIF3A-219ENST00000600879 FAM236DA0A1B0GTK5 79 aa4.99□□□□□ -1.61
HIF3A-219ENST00000600879 A8MUU9 505 aa4.99□□□□□ -1.61
HIF3A-219ENST00000600879 FAM236CP0DP71 79 aa4.99□□□□□ -1.61
HIF3A-219ENST00000600879 WFDC13Q8IUB5 93 aa4.99□□□□□ -1.61
HIF3A-219ENST00000600879 hDV103S1A0JD37 113 aa4.98□□□□□ -1.61
HIF3A-219ENST00000600879 HIST1H4AP62805 103 aaKnown RBP4.98□□□□□ -1.61
HIF3A-219ENST00000600879 CASC2Q6XLA1 102 aa4.98□□□□□ -1.61
HIF3A-219ENST00000600879 TMEM254Q8TBM7 123 aa4.98□□□□□ -1.61
HIF3A-219ENST00000600879 C20orf166-AS1Q96NR2 134 aa4.98□□□□□ -1.61
HIF3A-219ENST00000600879 MRPL34Q9BQ48 92 aaKnown RBP4.98□□□□□ -1.61
HIF3A-219ENST00000600879 NEBP20929 6669 aa4.98□□□□□ -1.61
HIF3A-219ENST00000600879 HCG22E2RYF7 251 aa4.97□□□□□ -1.61
HIF3A-219ENST00000600879 NDUFS5O43920 106 aa4.94□□□□□ -1.62
HIF3A-219ENST00000600879 Q8N9P0 234 aaPredicted RBP4.94□□□□□ -1.62
HIF3A-219ENST00000600879 A0A087WVE0 104 aa4.93□□□□□ -1.62
HIF3A-219ENST00000600879 MT-ATP8P03928 68 aa4.91□□□□□ -1.62
HIF3A-219ENST00000600879 KRTAP20-1Q3LI63 56 aa4.9□□□□□ -1.63
HIF3A-219ENST00000600879 ZCCHC13Q8WW36 166 aaKnown RBP4.9□□□□□ -1.63
HIF3A-219ENST00000600879 IMUPQ9GZP8 106 aa4.88□□□□□ -1.63
HIF3A-219ENST00000600879 RBM12B-AS1Q9P1G2 102 aa4.88□□□□□ -1.63
HIF3A-219ENST00000600879 HRES1P13985 223 aa4.86□□□□□ -1.63
HIF3A-219ENST00000600879 MUC12Q9UKN1 5478 aa4.86□□□□□ -1.63
HIF3A-219ENST00000600879 MPLKIPQ8TAP9 179 aa4.85□□□□□ -1.63
HIF3A-219ENST00000600879 TP53AIP1Q9HCN2 124 aa4.85□□□□□ -1.63
HIF3A-219ENST00000600879 Q5W150 140 aa4.84□□□□□ -1.63
HIF3A-219ENST00000600879 SCGB1A1P11684 91 aa4.82□□□□□ -1.64
HIF3A-219ENST00000600879 FAM236AA0A1B0GUQ0 79 aa4.81□□□□□ -1.64
HIF3A-219ENST00000600879 FAM236BA0A1B0GV22 79 aa4.81□□□□□ -1.64
HIF3A-219ENST00000600879 UQCRQO14949 82 aa4.8□□□□□ -1.64
HIF3A-219ENST00000600879 IGKV2D-30A0A075B6S6 120 aa4.79□□□□□ -1.64
HIF3A-219ENST00000600879 IGKV2-30P06310 120 aa4.79□□□□□ -1.64
HIF3A-219ENST00000600879 SPINK7P58062 85 aa4.79□□□□□ -1.64
HIF3A-219ENST00000600879 TRAV22A0A0B4J277 110 aa4.78□□□□□ -1.64
HIF3A-219ENST00000600879 C7orf65Q6ZTY9 151 aa4.78□□□□□ -1.64
HIF3A-219ENST00000600879 OCR1Q9BZK8 76 aa4.78□□□□□ -1.64
HIF3A-219ENST00000600879 H0Y9P7 68 aa4.77□□□□□ -1.65
HIF3A-219ENST00000600879 ATOX1O00244 68 aa4.75□□□□□ -1.65
HIF3A-219ENST00000600879 SMIM20Q8N5G0 67 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms