RNA–Protein interactions for RNA: ENST00000600841.1

NOTCH3-205, Transcript of notch 3, humanhuman

TSL 2

Gene NOTCH3, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-205ENST00000600841 M0R2T5 61 aa8.73□□□□□ -1.01
NOTCH3-205ENST00000600841 SPCS1Q9Y6A9 102 aa8.73□□□□□ -1.01
NOTCH3-205ENST00000600841 MTURNQ8N3F0 131 aa8.71□□□□□ -1.02
NOTCH3-205ENST00000600841 IGHV6-1A0A0B4J1U7 121 aa8.69□□□□□ -1.02
NOTCH3-205ENST00000600841 KRTAP16-1A8MUX0 517 aa8.69□□□□□ -1.02
NOTCH3-205ENST00000600841 H3BT86 120 aa8.69□□□□□ -1.02
NOTCH3-205ENST00000600841 C21orf62-AS1Q17RA5 79 aa8.69□□□□□ -1.02
NOTCH3-205ENST00000600841 C14orf132Q9NPU4 83 aa8.69□□□□□ -1.02
NOTCH3-205ENST00000600841 KRTAP10-6P60371 365 aaPredicted RBP8.68□□□□□ -1.02
NOTCH3-205ENST00000600841 NOTCH2NLQ7Z3S9 236 aa8.68□□□□□ -1.02
NOTCH3-205ENST00000600841 PDE6GP18545 87 aa8.67□□□□□ -1.02
NOTCH3-205ENST00000600841 Q6ZQT0 140 aa8.67□□□□□ -1.02
NOTCH3-205ENST00000600841 LOC110117498A0A087WWA1 95 aa8.66□□□□□ -1.02
NOTCH3-205ENST00000600841 LORP23490 312 aaPredicted RBP8.66□□□□□ -1.02
NOTCH3-205ENST00000600841 KRTAP9-6A0A140TA67 174 aa8.65□□□□□ -1.02
NOTCH3-205ENST00000600841 A0A1B0GVX0 72 aa8.65□□□□□ -1.02
NOTCH3-205ENST00000600841 C8orf87E5RJ46 101 aa8.64□□□□□ -1.03
NOTCH3-205ENST00000600841 J3KT08 172 aa8.64□□□□□ -1.03
NOTCH3-205ENST00000600841 K7EP34 96 aa8.62□□□□□ -1.03
NOTCH3-205ENST00000600841 A0A1B0GW54 56 aa8.6□□□□□ -1.03
NOTCH3-205ENST00000600841 GTF2H5Q6ZYL4 71 aa8.58□□□□□ -1.04
NOTCH3-205ENST00000600841 NDUFB1O75438 58 aa8.57□□□□□ -1.04
NOTCH3-205ENST00000600841 SMCPP49901 116 aaPredicted RBP8.56□□□□□ -1.04
NOTCH3-205ENST00000600841 NREPQ16612 68 aa8.54□□□□□ -1.04
NOTCH3-205ENST00000600841 FSIP2Q5CZC0 6907 aa8.54□□□□□ -1.04
NOTCH3-205ENST00000600841 PRO0461Q9UI25 63 aa8.53□□□□□ -1.04
NOTCH3-205ENST00000600841 A8MWP4 228 aa8.52□□□□□ -1.05
NOTCH3-205ENST00000600841 FAM236DA0A1B0GTK5 79 aa8.51□□□□□ -1.05
NOTCH3-205ENST00000600841 FAM236CP0DP71 79 aa8.51□□□□□ -1.05
NOTCH3-205ENST00000600841 RBM12B-AS1Q9P1G2 102 aa8.5□□□□□ -1.05
NOTCH3-205ENST00000600841 ZCCHC13Q8WW36 166 aaKnown RBP8.49□□□□□ -1.05
NOTCH3-205ENST00000600841 HRES1P13985 223 aa8.48□□□□□ -1.05
NOTCH3-205ENST00000600841 C8orf17Q9NRJ1 99 aa8.48□□□□□ -1.05
NOTCH3-205ENST00000600841 CRCT1Q9UGL9 99 aa8.48□□□□□ -1.05
NOTCH3-205ENST00000600841 IGKV3D-7A0A0C4DH55 119 aa8.47□□□□□ -1.05
NOTCH3-205ENST00000600841 F8W1H4 67 aa8.47□□□□□ -1.05
NOTCH3-205ENST00000600841 Q8N9P0 234 aaPredicted RBP8.47□□□□□ -1.05
NOTCH3-205ENST00000600841 MPLKIPQ8TAP9 179 aa8.46□□□□□ -1.06
NOTCH3-205ENST00000600841 PRR15Q8IV56 129 aa8.43□□□□□ -1.06
NOTCH3-205ENST00000600841 Q6ZVQ6 151 aa8.42□□□□□ -1.06
NOTCH3-205ENST00000600841 SPINK7P58062 85 aa8.4□□□□□ -1.06
NOTCH3-205ENST00000600841 ETDBQ3ZM63 59 aa8.4□□□□□ -1.06
NOTCH3-205ENST00000600841 BPY2O14599 106 aa8.39□□□□□ -1.07
NOTCH3-205ENST00000600841 KRTAP9-8Q9BYQ0 159 aa8.37□□□□□ -1.07
NOTCH3-205ENST00000600841 KRTAP3-3Q9BYR6 98 aa8.37□□□□□ -1.07
NOTCH3-205ENST00000600841 KRTAP3-2Q9BYR7 98 aa8.37□□□□□ -1.07
NOTCH3-205ENST00000600841 MMP24-AS1A0A0U1RRL7 71 aa8.36□□□□□ -1.07
NOTCH3-205ENST00000600841 UBL5Q9BZL1 73 aa8.36□□□□□ -1.07
NOTCH3-205ENST00000600841 TMEM254Q8TBM7 123 aa8.35□□□□□ -1.07
NOTCH3-205ENST00000600841 LINC00846Q9NV44 126 aa8.35□□□□□ -1.07
NOTCH3-205ENST00000600841 K7EQZ3 153 aa8.34□□□□□ -1.07
NOTCH3-205ENST00000600841 MRPL34Q9BQ48 92 aaKnown RBP8.34□□□□□ -1.07
NOTCH3-205ENST00000600841 hDV103S1A0JD37 113 aa8.32□□□□□ -1.08
NOTCH3-205ENST00000600841 A0A1B0GV90 55 aa8.3□□□□□ -1.08
NOTCH3-205ENST00000600841 WFDC13Q8IUB5 93 aa8.3□□□□□ -1.08
NOTCH3-205ENST00000600841 NDUFS5O43920 106 aa8.29□□□□□ -1.08
NOTCH3-205ENST00000600841 Q8N9L7 120 aa8.28□□□□□ -1.08
NOTCH3-205ENST00000600841 MT2AP02795 61 aa8.26□□□□□ -1.09
NOTCH3-205ENST00000600841 CASC2Q6XLA1 102 aa8.21□□□□□ -1.1
NOTCH3-205ENST00000600841 USH2AO75445 5202 aa8.2□□□□□ -1.1
NOTCH3-205ENST00000600841 MT1FP04733 61 aa8.2□□□□□ -1.1
NOTCH3-205ENST00000600841 ACYP1P07311 99 aa8.2□□□□□ -1.1
NOTCH3-205ENST00000600841 KRTAP10-10P60014 251 aa8.18□□□□□ -1.1
NOTCH3-205ENST00000600841 IGKV2D-30A0A075B6S6 120 aa8.16□□□□□ -1.1
NOTCH3-205ENST00000600841 IGKV2-30P06310 120 aa8.16□□□□□ -1.1
NOTCH3-205ENST00000600841 CXCL6P80162 114 aa8.16□□□□□ -1.1
NOTCH3-205ENST00000600841 Q5W150 140 aa8.16□□□□□ -1.1
NOTCH3-205ENST00000600841 HCG22E2RYF7 251 aa8.15□□□□□ -1.1
NOTCH3-205ENST00000600841 FAM240AA0A1B0GVK7 77 aa8.14□□□□□ -1.11
NOTCH3-205ENST00000600841 C7orf65Q6ZTY9 151 aa8.14□□□□□ -1.11
NOTCH3-205ENST00000600841 SSPOA2VEC9 5147 aa8.13□□□□□ -1.11
NOTCH3-205ENST00000600841 H1FX-AS1Q4G0G2 97 aa8.11□□□□□ -1.11
NOTCH3-205ENST00000600841 KRTAP9-3Q9BYQ3 159 aa8.11□□□□□ -1.11
NOTCH3-205ENST00000600841 LCE2BO14633 110 aa8.06□□□□□ -1.12
NOTCH3-205ENST00000600841 ATP5EP2Q5VTU8 51 aa8.06□□□□□ -1.12
NOTCH3-205ENST00000600841 J3QR89 54 aa8.03□□□□□ -1.12
NOTCH3-205ENST00000600841 HIST1H4AP62805 103 aaKnown RBP8.03□□□□□ -1.12
NOTCH3-205ENST00000600841 LINC00643Q86TS7 51 aa8.01□□□□□ -1.13
NOTCH3-205ENST00000600841 C4orf26Q17RF5 130 aa8□□□□□ -1.13
NOTCH3-205ENST00000600841 TP53AIP1Q9HCN2 124 aa7.98□□□□□ -1.13
NOTCH3-205ENST00000600841 FCGBPQ9Y6R7 5405 aaPredicted RBP7.94□□□□□ -1.14
NOTCH3-205ENST00000600841 KRTAP19-1Q8IUB9 90 aa7.93□□□□□ -1.14
NOTCH3-205ENST00000600841 A0A087WVE0 104 aa7.91□□□□□ -1.14
NOTCH3-205ENST00000600841 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.89□□□□□ -1.15
NOTCH3-205ENST00000600841 C1orf64Q8NEQ6 169 aa7.87□□□□□ -1.15
NOTCH3-205ENST00000600841 KRTAP3-1Q9BYR8 98 aa7.86□□□□□ -1.15
NOTCH3-205ENST00000600841 C5orf47Q569G3 176 aa7.84□□□□□ -1.15
NOTCH3-205ENST00000600841 S4R3F8 94 aa7.84□□□□□ -1.15
NOTCH3-205ENST00000600841 TRAV22A0A0B4J277 110 aa7.83□□□□□ -1.16
NOTCH3-205ENST00000600841 K7ERU9 68 aa7.83□□□□□ -1.16
NOTCH3-205ENST00000600841 UQCRQO14949 82 aa7.83□□□□□ -1.16
NOTCH3-205ENST00000600841 KRTAP19-6Q3LI70 58 aa7.79□□□□□ -1.16
NOTCH3-205ENST00000600841 CYP4F30PQ9H0H9 118 aa7.79□□□□□ -1.16
NOTCH3-205ENST00000600841 LOC101927531A0A1B0GV80 90 aa7.78□□□□□ -1.16
NOTCH3-205ENST00000600841 KRTAP9-7A8MTY7 169 aa7.78□□□□□ -1.16
NOTCH3-205ENST00000600841 H0Y9P7 68 aa7.78□□□□□ -1.16
NOTCH3-205ENST00000600841 CSAG1Q6PB30 78 aa7.78□□□□□ -1.16
NOTCH3-205ENST00000600841 LCA10Q71F78 164 aa7.77□□□□□ -1.17
NOTCH3-205ENST00000600841 FAM236AA0A1B0GUQ0 79 aa7.75□□□□□ -1.17
NOTCH3-205ENST00000600841 FAM236BA0A1B0GV22 79 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms