RNA–Protein interactions for RNA: ENST00000600387.5

ARHGEF1-221, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARHGEF1, Length 2,272 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-221ENST00000600387 IGLV5-52A0A0A0MRZ9 124 aa11.04□□□□□ -0.64
ARHGEF1-221ENST00000600387 KRTAP13-3Q3SY46 172 aa11.04□□□□□ -0.64
ARHGEF1-221ENST00000600387 ACYP2P14621 99 aa11.03□□□□□ -0.64
ARHGEF1-221ENST00000600387 PSORS1C2Q9UIG4 136 aa11.03□□□□□ -0.64
ARHGEF1-221ENST00000600387 Q5W150 140 aa11.02□□□□□ -0.64
ARHGEF1-221ENST00000600387 PRR26Q8N8Z3 221 aa11.02□□□□□ -0.64
ARHGEF1-221ENST00000600387 CSMD3Q7Z407 3707 aa11.01□□□□□ -0.65
ARHGEF1-221ENST00000600387 ZNF861PO60384 105 aa11.01□□□□□ -0.65
ARHGEF1-221ENST00000600387 DYNC2H1Q8NCM8 4307 aaKnown RBP11.01□□□□□ -0.65
ARHGEF1-221ENST00000600387 ANAPC11Q9NYG5 84 aa11□□□□□ -0.65
ARHGEF1-221ENST00000600387 STAB2Q8WWQ8 2551 aa10.99□□□□□ -0.65
ARHGEF1-221ENST00000600387 COL7A1Q02388 2944 aa10.98□□□□□ -0.65
ARHGEF1-221ENST00000600387 SPINK6Q6UWN8 80 aa10.97□□□□□ -0.65
ARHGEF1-221ENST00000600387 DNAH7Q8WXX0 4024 aa10.97□□□□□ -0.65
ARHGEF1-221ENST00000600387 ALMS1Q8TCU4 4167 aa10.96□□□□□ -0.66
ARHGEF1-221ENST00000600387 C8orf87E5RJ46 101 aa10.95□□□□□ -0.66
ARHGEF1-221ENST00000600387 A0A087WTM6 91 aa10.93□□□□□ -0.66
ARHGEF1-221ENST00000600387 DMAC1Q96GE9 116 aa10.93□□□□□ -0.66
ARHGEF1-221ENST00000600387 NUPR2A6NF83 97 aa10.92□□□□□ -0.66
ARHGEF1-221ENST00000600387 RTL8CO15255 209 aa10.91□□□□□ -0.66
ARHGEF1-221ENST00000600387 CIRBP-AS1Q8TBR5 109 aa10.87□□□□□ -0.67
ARHGEF1-221ENST00000600387 DNAH8Q96JB1 4490 aa10.86□□□□□ -0.67
ARHGEF1-221ENST00000600387 FAM229AH3BQW9 127 aa10.85□□□□□ -0.67
ARHGEF1-221ENST00000600387 PLECQ15149 4684 aaKnown RBP10.84□□□□□ -0.67
ARHGEF1-221ENST00000600387 A0A1B0GU69 56 aa10.84□□□□□ -0.67
ARHGEF1-221ENST00000600387 SSBP3-AS1Q7Z2R9 100 aa10.83□□□□□ -0.68
ARHGEF1-221ENST00000600387 IGLV7-43P04211 117 aa10.83□□□□□ -0.68
ARHGEF1-221ENST00000600387 LINC00313P59037 77 aa10.82□□□□□ -0.68
ARHGEF1-221ENST00000600387 FRAS1Q86XX4 4008 aa10.82□□□□□ -0.68
ARHGEF1-221ENST00000600387 HECTD4Q9Y4D8 3996 aa10.81□□□□□ -0.68
ARHGEF1-221ENST00000600387 MGAM2Q2M2H8 2515 aa10.8□□□□□ -0.68
ARHGEF1-221ENST00000600387 IGKV2-30P06310 120 aa10.79□□□□□ -0.68
ARHGEF1-221ENST00000600387 SPATA8Q6RVD6 105 aa10.78□□□□□ -0.68
ARHGEF1-221ENST00000600387 PLA2G1BP04054 148 aaKnown RBP10.76□□□□□ -0.69
ARHGEF1-221ENST00000600387 VPS13DQ5THJ4 4388 aa10.73□□□□□ -0.69
ARHGEF1-221ENST00000600387 RETNLBQ9BQ08 111 aa10.72□□□□□ -0.69
ARHGEF1-221ENST00000600387 UQCR11O14957 56 aa10.7□□□□□ -0.7
ARHGEF1-221ENST00000600387 MIR22HGQ0VDD5 57 aa10.69□□□□□ -0.7
ARHGEF1-221ENST00000600387 PRAC1Q96KF2 57 aa10.69□□□□□ -0.7
ARHGEF1-221ENST00000600387 DNAH17Q9UFH2 4485 aa10.69□□□□□ -0.7
ARHGEF1-221ENST00000600387 KRTAP16-1A8MUX0 517 aa10.64□□□□□ -0.71
ARHGEF1-221ENST00000600387 ADM2Q7Z4H4 148 aa10.63□□□□□ -0.71
ARHGEF1-221ENST00000600387 STARD9Q9P2P6 4700 aa10.6□□□□□ -0.71
ARHGEF1-221ENST00000600387 C1orf134Q5TEV5 83 aa10.59□□□□□ -0.71
ARHGEF1-221ENST00000600387 IGKV2D-30A0A075B6S6 120 aa10.58□□□□□ -0.72
ARHGEF1-221ENST00000600387 KRTAP13-2Q52LG2 175 aa10.58□□□□□ -0.72
ARHGEF1-221ENST00000600387 PRKDCP78527 4128 aaKnown RBP10.57□□□□□ -0.72
ARHGEF1-221ENST00000600387 FBN3Q75N90 2809 aa10.55□□□□□ -0.72
ARHGEF1-221ENST00000600387 LINC01554Q52M75 96 aa10.55□□□□□ -0.72
ARHGEF1-221ENST00000600387 DNAH2Q9P225 4427 aa10.54□□□□□ -0.72
ARHGEF1-221ENST00000600387 KMT2AQ03164 3969 aa10.52□□□□□ -0.73
ARHGEF1-221ENST00000600387 MEGF8Q7Z7M0 2845 aa10.48□□□□□ -0.73
ARHGEF1-221ENST00000600387 DNAH11Q96DT5 4516 aa10.42□□□□□ -0.74
ARHGEF1-221ENST00000600387 KRTAP1-4P0C5Y4 121 aa10.39□□□□□ -0.75
ARHGEF1-221ENST00000600387 KRTAP10-2P60368 255 aa10.39□□□□□ -0.75
ARHGEF1-221ENST00000600387 TGP01266 2768 aa10.39□□□□□ -0.75
ARHGEF1-221ENST00000600387 C4orf48Q5BLP8 95 aa10.38□□□□□ -0.75
ARHGEF1-221ENST00000600387 CSAG1Q6PB30 78 aa10.37□□□□□ -0.75
ARHGEF1-221ENST00000600387 SPINK1P00995 79 aa10.37□□□□□ -0.75
ARHGEF1-221ENST00000600387 DNAH6Q9C0G6 4158 aa10.36□□□□□ -0.75
ARHGEF1-221ENST00000600387 Q6ZSA8 131 aa10.35□□□□□ -0.75
ARHGEF1-221ENST00000600387 LY6G6CO95867 125 aa10.33□□□□□ -0.76
ARHGEF1-221ENST00000600387 Q8N1X5 172 aa10.33□□□□□ -0.76
ARHGEF1-221ENST00000600387 DNAH5Q8TE73 4624 aa10.32□□□□□ -0.76
ARHGEF1-221ENST00000600387 TYMSOSQ8TAI1 123 aa10.3□□□□□ -0.76
ARHGEF1-221ENST00000600387 KRTAP10-1P60331 282 aa10.27□□□□□ -0.76
ARHGEF1-221ENST00000600387 H0YAA0 97 aa10.22□□□□□ -0.77
ARHGEF1-221ENST00000600387 A8MUU9 505 aa10.21□□□□□ -0.77
ARHGEF1-221ENST00000600387 RPS29P62273 56 aaKnown RBP10.2□□□□□ -0.78
ARHGEF1-221ENST00000600387 LRP1BQ9NZR2 4599 aa10.2□□□□□ -0.78
ARHGEF1-221ENST00000600387 A0A1B0GU33 70 aa10.15□□□□□ -0.78
ARHGEF1-221ENST00000600387 LINC00304Q8N9R0 145 aa10.14□□□□□ -0.79
ARHGEF1-221ENST00000600387 VPS13BQ7Z7G8 4022 aa10.14□□□□□ -0.79
ARHGEF1-221ENST00000600387 PKD1P98161 4303 aa10.13□□□□□ -0.79
ARHGEF1-221ENST00000600387 H1FX-AS1Q4G0G2 97 aa10.1□□□□□ -0.79
ARHGEF1-221ENST00000600387 KRTAP25-1Q3LHN0 102 aa10.09□□□□□ -0.79
ARHGEF1-221ENST00000600387 C20orf166-AS1Q96NR2 134 aa10.08□□□□□ -0.8
ARHGEF1-221ENST00000600387 KRTAP3-1Q9BYR8 98 aa10.07□□□□□ -0.8
ARHGEF1-221ENST00000600387 H3BS24 57 aa10□□□□□ -0.81
ARHGEF1-221ENST00000600387 C9orf92A6NGG3 77 aa10□□□□□ -0.81
ARHGEF1-221ENST00000600387 KRTAP21-3Q3LHN1 58 aa10□□□□□ -0.81
ARHGEF1-221ENST00000600387 FAT2Q9NYQ8 4349 aa9.99□□□□□ -0.81
ARHGEF1-221ENST00000600387 K7ERS5 55 aa9.96□□□□□ -0.81
ARHGEF1-221ENST00000600387 SACSQ9NZJ4 4579 aa9.92□□□□□ -0.82
ARHGEF1-221ENST00000600387 DNHD1Q96M86 4753 aa9.91□□□□□ -0.82
ARHGEF1-221ENST00000600387 ROMO1P60602 79 aa9.89□□□□□ -0.83
ARHGEF1-221ENST00000600387 COX6B2Q6YFQ2 88 aa9.89□□□□□ -0.83
ARHGEF1-221ENST00000600387 HYDINQ4G0P3 5121 aa9.87□□□□□ -0.83
ARHGEF1-221ENST00000600387 PKHD1L1Q86WI1 4243 aa9.79□□□□□ -0.84
ARHGEF1-221ENST00000600387 SMR3BP02814 79 aaPredicted RBP9.74□□□□□ -0.85
ARHGEF1-221ENST00000600387 CRIPTQ9P021 101 aa9.74□□□□□ -0.85
ARHGEF1-221ENST00000600387 FLG2Q5D862 2391 aaPredicted RBP9.73□□□□□ -0.85
ARHGEF1-221ENST00000600387 RPL37P61927 97 aaKnown RBP9.72□□□□□ -0.85
ARHGEF1-221ENST00000600387 PKHD1P08F94 4074 aa9.69□□□□□ -0.86
ARHGEF1-221ENST00000600387 KRTAP10-6P60371 365 aaPredicted RBP9.67□□□□□ -0.86
ARHGEF1-221ENST00000600387 KRTAP10-4P60372 401 aaPredicted RBP9.66□□□□□ -0.86
ARHGEF1-221ENST00000600387 APOBP04114 4563 aaKnown RBP9.64□□□□□ -0.87
ARHGEF1-221ENST00000600387 KRTAP3-3Q9BYR6 98 aa9.62□□□□□ -0.87
ARHGEF1-221ENST00000600387 KRTAP13-4Q3LI77 160 aa9.59□□□□□ -0.87
ARHGEF1-221ENST00000600387 KRTAP3-2Q9BYR7 98 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms