RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 IGHV6-1A0A0B4J1U7 121 aa10.86□□□□□ -0.67
SHKBP1-222ENST00000600320 A0A1B0GVX0 72 aa10.86□□□□□ -0.67
SHKBP1-222ENST00000600320 A8MWP4 228 aa10.85□□□□□ -0.67
SHKBP1-222ENST00000600320 IGKV3D-7A0A0C4DH55 119 aa10.84□□□□□ -0.67
SHKBP1-222ENST00000600320 UBL5Q9BZL1 73 aa10.84□□□□□ -0.67
SHKBP1-222ENST00000600320 BPY2O14599 106 aa10.83□□□□□ -0.68
SHKBP1-222ENST00000600320 LINC00313P59037 77 aa10.81□□□□□ -0.68
SHKBP1-222ENST00000600320 MUC17Q685J3 4493 aa10.81□□□□□ -0.68
SHKBP1-222ENST00000600320 KRTAP16-1A8MUX0 517 aa10.8□□□□□ -0.68
SHKBP1-222ENST00000600320 NDUFB1O75438 58 aa10.8□□□□□ -0.68
SHKBP1-222ENST00000600320 FAM240AA0A1B0GVK7 77 aa10.79□□□□□ -0.68
SHKBP1-222ENST00000600320 C8orf87E5RJ46 101 aa10.79□□□□□ -0.68
SHKBP1-222ENST00000600320 ACYP1P07311 99 aa10.78□□□□□ -0.68
SHKBP1-222ENST00000600320 PRR15Q8IV56 129 aa10.78□□□□□ -0.68
SHKBP1-222ENST00000600320 K7EQZ3 153 aa10.77□□□□□ -0.69
SHKBP1-222ENST00000600320 RPL37P61927 97 aaKnown RBP10.77□□□□□ -0.69
SHKBP1-222ENST00000600320 Q8N9L7 120 aa10.75□□□□□ -0.69
SHKBP1-222ENST00000600320 C8orf17Q9NRJ1 99 aa10.75□□□□□ -0.69
SHKBP1-222ENST00000600320 C20orf166-AS1Q96NR2 134 aa10.73□□□□□ -0.69
SHKBP1-222ENST00000600320 A8MUU9 505 aa10.72□□□□□ -0.69
SHKBP1-222ENST00000600320 SEC61BP60468 96 aaKnown RBP10.72□□□□□ -0.69
SHKBP1-222ENST00000600320 Q75L30 129 aa10.72□□□□□ -0.69
SHKBP1-222ENST00000600320 MMP24-AS1A0A0U1RRL7 71 aa10.7□□□□□ -0.7
SHKBP1-222ENST00000600320 PCOTHQ58A44 107 aa10.7□□□□□ -0.7
SHKBP1-222ENST00000600320 J3QR89 54 aa10.66□□□□□ -0.7
SHKBP1-222ENST00000600320 CXCL6P80162 114 aa10.66□□□□□ -0.7
SHKBP1-222ENST00000600320 KRTAP4-1Q9BYQ7 146 aa10.64□□□□□ -0.71
SHKBP1-222ENST00000600320 WFDC13Q8IUB5 93 aa10.6□□□□□ -0.71
SHKBP1-222ENST00000600320 Q8N9P0 234 aaPredicted RBP10.6□□□□□ -0.71
SHKBP1-222ENST00000600320 TMEM254Q8TBM7 123 aa10.6□□□□□ -0.71
SHKBP1-222ENST00000600320 hDV103S1A0JD37 113 aa10.59□□□□□ -0.71
SHKBP1-222ENST00000600320 LINC00643Q86TS7 51 aa10.59□□□□□ -0.71
SHKBP1-222ENST00000600320 MRPL34Q9BQ48 92 aaKnown RBP10.59□□□□□ -0.71
SHKBP1-222ENST00000600320 ATP11AUNQ6ZP68 121 aa10.58□□□□□ -0.72
SHKBP1-222ENST00000600320 ATP5EP2Q5VTU8 51 aa10.57□□□□□ -0.72
SHKBP1-222ENST00000600320 CASC2Q6XLA1 102 aa10.55□□□□□ -0.72
SHKBP1-222ENST00000600320 HCG22E2RYF7 251 aa10.54□□□□□ -0.72
SHKBP1-222ENST00000600320 K7ERU9 68 aa10.52□□□□□ -0.73
SHKBP1-222ENST00000600320 MUC2Q02817 5179 aa10.48□□□□□ -0.73
SHKBP1-222ENST00000600320 ZCCHC13Q8WW36 166 aaKnown RBP10.48□□□□□ -0.73
SHKBP1-222ENST00000600320 NDUFS5O43920 106 aa10.47□□□□□ -0.73
SHKBP1-222ENST00000600320 HIST1H4AP62805 103 aaKnown RBP10.47□□□□□ -0.73
SHKBP1-222ENST00000600320 A0A0U1RQV1 116 aa10.45□□□□□ -0.74
SHKBP1-222ENST00000600320 A0A087WVE0 104 aa10.42□□□□□ -0.74
SHKBP1-222ENST00000600320 Q5W150 140 aa10.37□□□□□ -0.75
SHKBP1-222ENST00000600320 MT-ATP8P03928 68 aa10.35□□□□□ -0.75
SHKBP1-222ENST00000600320 KRTAP19-2Q3LHN2 52 aa10.3□□□□□ -0.76
SHKBP1-222ENST00000600320 SPINK7P58062 85 aa10.29□□□□□ -0.76
SHKBP1-222ENST00000600320 TP53AIP1Q9HCN2 124 aa10.27□□□□□ -0.77
SHKBP1-222ENST00000600320 HRES1P13985 223 aa10.26□□□□□ -0.77
SHKBP1-222ENST00000600320 IMUPQ9GZP8 106 aa10.24□□□□□ -0.77
SHKBP1-222ENST00000600320 LCE2CQ5TA81 110 aa10.23□□□□□ -0.77
SHKBP1-222ENST00000600320 FAT4Q6V0I7 4981 aa10.22□□□□□ -0.77
SHKBP1-222ENST00000600320 KRTAP9-2Q9BYQ4 174 aa10.21□□□□□ -0.77
SHKBP1-222ENST00000600320 LCE2AQ5TA79 106 aaPredicted RBP10.2□□□□□ -0.78
SHKBP1-222ENST00000600320 IGKV2D-30A0A075B6S6 120 aa10.19□□□□□ -0.78
SHKBP1-222ENST00000600320 IGKV2-30P06310 120 aa10.19□□□□□ -0.78
SHKBP1-222ENST00000600320 MPLKIPQ8TAP9 179 aa10.18□□□□□ -0.78
SHKBP1-222ENST00000600320 UQCRQO14949 82 aa10.16□□□□□ -0.78
SHKBP1-222ENST00000600320 C7orf65Q6ZTY9 151 aa10.16□□□□□ -0.78
SHKBP1-222ENST00000600320 OCR1Q9BZK8 76 aa10.15□□□□□ -0.78
SHKBP1-222ENST00000600320 TRAV22A0A0B4J277 110 aa10.13□□□□□ -0.79
SHKBP1-222ENST00000600320 COX6B2Q6YFQ2 88 aa10.12□□□□□ -0.79
SHKBP1-222ENST00000600320 FAM236AA0A1B0GUQ0 79 aa10.09□□□□□ -0.79
SHKBP1-222ENST00000600320 FAM236BA0A1B0GV22 79 aa10.09□□□□□ -0.79
SHKBP1-222ENST00000600320 SCGB1A1P11684 91 aa10.09□□□□□ -0.79
SHKBP1-222ENST00000600320 H0Y9P7 68 aa10.08□□□□□ -0.8
SHKBP1-222ENST00000600320 RBM12B-AS1Q9P1G2 102 aa10.08□□□□□ -0.8
SHKBP1-222ENST00000600320 MT1HP80294 61 aa10.05□□□□□ -0.8
SHKBP1-222ENST00000600320 FAM236DA0A1B0GTK5 79 aa10.04□□□□□ -0.8
SHKBP1-222ENST00000600320 FAM236CP0DP71 79 aa10.04□□□□□ -0.8
SHKBP1-222ENST00000600320 CYP4F30PQ9H0H9 118 aa10.02□□□□□ -0.81
SHKBP1-222ENST00000600320 LOC101927531A0A1B0GV80 90 aa10.01□□□□□ -0.81
SHKBP1-222ENST00000600320 ATOX1O00244 68 aa10□□□□□ -0.81
SHKBP1-222ENST00000600320 KRTAP9-6A0A140TA67 174 aa9.98□□□□□ -0.81
SHKBP1-222ENST00000600320 C4orf26Q17RF5 130 aa9.97□□□□□ -0.81
SHKBP1-222ENST00000600320 C5orf47Q569G3 176 aa9.97□□□□□ -0.81
SHKBP1-222ENST00000600320 LINC00208Q96KT6 92 aa9.97□□□□□ -0.81
SHKBP1-222ENST00000600320 C1orf64Q8NEQ6 169 aa9.96□□□□□ -0.82
SHKBP1-222ENST00000600320 MP68P56378 58 aa9.95□□□□□ -0.82
SHKBP1-222ENST00000600320 TRAV7A0A075B6U4 112 aa9.94□□□□□ -0.82
SHKBP1-222ENST00000600320 FLGP20930 4061 aaPredicted RBP9.93□□□□□ -0.82
SHKBP1-222ENST00000600320 SMIM20Q8N5G0 67 aa9.92□□□□□ -0.82
SHKBP1-222ENST00000600320 H3BPC8 53 aa9.88□□□□□ -0.83
SHKBP1-222ENST00000600320 KLKP1Q107X0 134 aa9.87□□□□□ -0.83
SHKBP1-222ENST00000600320 KRTAP3-1Q9BYR8 98 aa9.87□□□□□ -0.83
SHKBP1-222ENST00000600320 M0R2T5 61 aa9.84□□□□□ -0.83
SHKBP1-222ENST00000600320 H1FX-AS1Q4G0G2 97 aa9.84□□□□□ -0.83
SHKBP1-222ENST00000600320 SERP2Q8N6R1 65 aa9.8□□□□□ -0.84
SHKBP1-222ENST00000600320 KRTAP10-6P60371 365 aaPredicted RBP9.76□□□□□ -0.85
SHKBP1-222ENST00000600320 LCE2DQ5TA82 110 aaPredicted RBP9.76□□□□□ -0.85
SHKBP1-222ENST00000600320 LORP23490 312 aaPredicted RBP9.73□□□□□ -0.85
SHKBP1-222ENST00000600320 SNURFQ9Y675 71 aa9.72□□□□□ -0.85
SHKBP1-222ENST00000600320 C20orf197Q8N268 126 aa9.69□□□□□ -0.86
SHKBP1-222ENST00000600320 FSIP2Q5CZC0 6907 aa9.68□□□□□ -0.86
SHKBP1-222ENST00000600320 COX7CP15954 63 aa9.66□□□□□ -0.86
SHKBP1-222ENST00000600320 S4R3F8 94 aa9.63□□□□□ -0.87
SHKBP1-222ENST00000600320 A8MUN3 132 aa9.6□□□□□ -0.87
SHKBP1-222ENST00000600320 LCA10Q71F78 164 aa9.6□□□□□ -0.87
SHKBP1-222ENST00000600320 ANAPC13Q9BS18 74 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms