RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 LCE2DQ5TA82 110 aaPredicted RBP10.31□□□□□ -0.76
CCDC9-205ENST00000600117 SIGMAR1Q99720 223 aa10.31□□□□□ -0.76
CCDC9-205ENST00000600117 CRCT1Q9UGL9 99 aa10.31□□□□□ -0.76
CCDC9-205ENST00000600117 XP32Q5T750 250 aa10.29□□□□□ -0.76
CCDC9-205ENST00000600117 NREPQ16612 68 aa10.27□□□□□ -0.77
CCDC9-205ENST00000600117 J3KT08 172 aa10.25□□□□□ -0.77
CCDC9-205ENST00000600117 LINC00846Q9NV44 126 aa10.23□□□□□ -0.77
CCDC9-205ENST00000600117 Q6ZVQ6 151 aa10.22□□□□□ -0.77
CCDC9-205ENST00000600117 A0A1B0GVX0 72 aa10.19□□□□□ -0.78
CCDC9-205ENST00000600117 DSCR10P59022 87 aa10.19□□□□□ -0.78
CCDC9-205ENST00000600117 A8MWP4 228 aa10.17□□□□□ -0.78
CCDC9-205ENST00000600117 NOTCH2NLQ7Z3S9 236 aa10.17□□□□□ -0.78
CCDC9-205ENST00000600117 IGHV6-1A0A0B4J1U7 121 aa10.16□□□□□ -0.78
CCDC9-205ENST00000600117 IGKV3D-7A0A0C4DH55 119 aa10.15□□□□□ -0.78
CCDC9-205ENST00000600117 LINC00313P59037 77 aa10.15□□□□□ -0.78
CCDC9-205ENST00000600117 UBL5Q9BZL1 73 aa10.15□□□□□ -0.78
CCDC9-205ENST00000600117 KRTAP16-1A8MUX0 517 aa10.13□□□□□ -0.79
CCDC9-205ENST00000600117 BPY2O14599 106 aa10.13□□□□□ -0.79
CCDC9-205ENST00000600117 NDUFB1O75438 58 aa10.13□□□□□ -0.79
CCDC9-205ENST00000600117 RPL37P61927 97 aaKnown RBP10.13□□□□□ -0.79
CCDC9-205ENST00000600117 C8orf87E5RJ46 101 aa10.12□□□□□ -0.79
CCDC9-205ENST00000600117 SEC61BP60468 96 aaKnown RBP10.11□□□□□ -0.79
CCDC9-205ENST00000600117 PRR15Q8IV56 129 aa10.11□□□□□ -0.79
CCDC9-205ENST00000600117 FAM240AA0A1B0GVK7 77 aa10.1□□□□□ -0.79
CCDC9-205ENST00000600117 K7EQZ3 153 aa10.09□□□□□ -0.79
CCDC9-205ENST00000600117 ACYP1P07311 99 aa10.09□□□□□ -0.79
CCDC9-205ENST00000600117 Q75L30 129 aa10.09□□□□□ -0.79
CCDC9-205ENST00000600117 C20orf166-AS1Q96NR2 134 aa10.09□□□□□ -0.79
CCDC9-205ENST00000600117 A8MUU9 505 aa10.08□□□□□ -0.8
CCDC9-205ENST00000600117 C8orf17Q9NRJ1 99 aa10.07□□□□□ -0.8
CCDC9-205ENST00000600117 PCOTHQ58A44 107 aa10.05□□□□□ -0.8
CCDC9-205ENST00000600117 Q8N9L7 120 aa10.04□□□□□ -0.8
CCDC9-205ENST00000600117 MMP24-AS1A0A0U1RRL7 71 aa10.02□□□□□ -0.81
CCDC9-205ENST00000600117 KRTAP4-1Q9BYQ7 146 aa10.01□□□□□ -0.81
CCDC9-205ENST00000600117 CXCL6P80162 114 aa9.98□□□□□ -0.81
CCDC9-205ENST00000600117 J3QR89 54 aa9.95□□□□□ -0.82
CCDC9-205ENST00000600117 Q8N9P0 234 aaPredicted RBP9.95□□□□□ -0.82
CCDC9-205ENST00000600117 TMEM254Q8TBM7 123 aa9.95□□□□□ -0.82
CCDC9-205ENST00000600117 ATP11AUNQ6ZP68 121 aa9.94□□□□□ -0.82
CCDC9-205ENST00000600117 hDV103S1A0JD37 113 aa9.92□□□□□ -0.82
CCDC9-205ENST00000600117 MRPL34Q9BQ48 92 aaKnown RBP9.92□□□□□ -0.82
CCDC9-205ENST00000600117 ATP5EP2Q5VTU8 51 aa9.91□□□□□ -0.82
CCDC9-205ENST00000600117 LINC00643Q86TS7 51 aa9.89□□□□□ -0.83
CCDC9-205ENST00000600117 WFDC13Q8IUB5 93 aa9.89□□□□□ -0.83
CCDC9-205ENST00000600117 CASC2Q6XLA1 102 aa9.88□□□□□ -0.83
CCDC9-205ENST00000600117 HCG22E2RYF7 251 aa9.87□□□□□ -0.83
CCDC9-205ENST00000600117 LCE2CQ5TA81 110 aa9.83□□□□□ -0.84
CCDC9-205ENST00000600117 ZCCHC13Q8WW36 166 aaKnown RBP9.83□□□□□ -0.84
CCDC9-205ENST00000600117 K7ERU9 68 aa9.81□□□□□ -0.84
CCDC9-205ENST00000600117 NDUFS5O43920 106 aa9.78□□□□□ -0.84
CCDC9-205ENST00000600117 HIST1H4AP62805 103 aaKnown RBP9.76□□□□□ -0.85
CCDC9-205ENST00000600117 MT1HP80294 61 aa9.75□□□□□ -0.85
CCDC9-205ENST00000600117 KRTAP19-2Q3LHN2 52 aa9.73□□□□□ -0.85
CCDC9-205ENST00000600117 A0A087WVE0 104 aa9.71□□□□□ -0.86
CCDC9-205ENST00000600117 KRTAP9-7A8MTY7 169 aa9.7□□□□□ -0.86
CCDC9-205ENST00000600117 LORP23490 312 aaPredicted RBP9.7□□□□□ -0.86
CCDC9-205ENST00000600117 Q5W150 140 aa9.7□□□□□ -0.86
CCDC9-205ENST00000600117 KRTAP10-6P60371 365 aaPredicted RBP9.66□□□□□ -0.86
CCDC9-205ENST00000600117 SPINK7P58062 85 aa9.65□□□□□ -0.86
CCDC9-205ENST00000600117 HRES1P13985 223 aa9.64□□□□□ -0.87
CCDC9-205ENST00000600117 TP53AIP1Q9HCN2 124 aa9.64□□□□□ -0.87
CCDC9-205ENST00000600117 MT-ATP8P03928 68 aa9.63□□□□□ -0.87
CCDC9-205ENST00000600117 FLGP20930 4061 aaPredicted RBP9.62□□□□□ -0.87
CCDC9-205ENST00000600117 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.62□□□□□ -0.87
CCDC9-205ENST00000600117 MPLKIPQ8TAP9 179 aa9.6□□□□□ -0.87
CCDC9-205ENST00000600117 IMUPQ9GZP8 106 aa9.58□□□□□ -0.88
CCDC9-205ENST00000600117 IGKV2D-30A0A075B6S6 120 aa9.54□□□□□ -0.88
CCDC9-205ENST00000600117 IGKV2-30P06310 120 aa9.54□□□□□ -0.88
CCDC9-205ENST00000600117 C7orf65Q6ZTY9 151 aa9.53□□□□□ -0.88
CCDC9-205ENST00000600117 M0R2T5 61 aa9.52□□□□□ -0.89
CCDC9-205ENST00000600117 COX6B2Q6YFQ2 88 aa9.52□□□□□ -0.89
CCDC9-205ENST00000600117 UQCRQO14949 82 aa9.51□□□□□ -0.89
CCDC9-205ENST00000600117 SSPOA2VEC9 5147 aa9.51□□□□□ -0.89
CCDC9-205ENST00000600117 OCR1Q9BZK8 76 aa9.5□□□□□ -0.89
CCDC9-205ENST00000600117 TRAV22A0A0B4J277 110 aa9.49□□□□□ -0.89
CCDC9-205ENST00000600117 USH2AO75445 5202 aa9.49□□□□□ -0.89
CCDC9-205ENST00000600117 RBM12B-AS1Q9P1G2 102 aa9.48□□□□□ -0.89
CCDC9-205ENST00000600117 H0Y9P7 68 aa9.43□□□□□ -0.9
CCDC9-205ENST00000600117 FAM236DA0A1B0GTK5 79 aa9.42□□□□□ -0.9
CCDC9-205ENST00000600117 FAM236CP0DP71 79 aa9.42□□□□□ -0.9
CCDC9-205ENST00000600117 SCGB1A1P11684 91 aa9.42□□□□□ -0.9
CCDC9-205ENST00000600117 FAM236AA0A1B0GUQ0 79 aa9.41□□□□□ -0.9
CCDC9-205ENST00000600117 FAM236BA0A1B0GV22 79 aa9.41□□□□□ -0.9
CCDC9-205ENST00000600117 FCGBPQ9Y6R7 5405 aaPredicted RBP9.4□□□□□ -0.91
CCDC9-205ENST00000600117 LOC101927531A0A1B0GV80 90 aa9.39□□□□□ -0.91
CCDC9-205ENST00000600117 ATOX1O00244 68 aa9.38□□□□□ -0.91
CCDC9-205ENST00000600117 CYP4F30PQ9H0H9 118 aa9.38□□□□□ -0.91
CCDC9-205ENST00000600117 C4orf26Q17RF5 130 aa9.34□□□□□ -0.91
CCDC9-205ENST00000600117 C5orf47Q569G3 176 aa9.34□□□□□ -0.91
CCDC9-205ENST00000600117 MP68P56378 58 aa9.31□□□□□ -0.92
CCDC9-205ENST00000600117 C1orf64Q8NEQ6 169 aa9.31□□□□□ -0.92
CCDC9-205ENST00000600117 LINC00208Q96KT6 92 aa9.31□□□□□ -0.92
CCDC9-205ENST00000600117 SMIM20Q8N5G0 67 aa9.29□□□□□ -0.92
CCDC9-205ENST00000600117 TRAV7A0A075B6U4 112 aa9.28□□□□□ -0.92
CCDC9-205ENST00000600117 H3BPC8 53 aa9.26□□□□□ -0.93
CCDC9-205ENST00000600117 KRTAP3-1Q9BYR8 98 aa9.26□□□□□ -0.93
CCDC9-205ENST00000600117 SYNE2Q8WXH0 6885 aaKnown RBP9.25□□□□□ -0.93
CCDC9-205ENST00000600117 MACF1Q9UPN3 7388 aaKnown RBP9.25□□□□□ -0.93
CCDC9-205ENST00000600117 H1FX-AS1Q4G0G2 97 aa9.25□□□□□ -0.93
CCDC9-205ENST00000600117 KLKP1Q107X0 134 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms