RNA–Protein interactions for RNA: ENST00000597180.1

IRF3-216, Transcript of interferon regulatory factor 3, humanhuman

TSL 5

Gene IRF3, Length 301 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-216ENST00000597180 SMCPP49901 116 aaPredicted RBP9.6□□□□□ -0.87
IRF3-216ENST00000597180 LINC00313P59037 77 aa9.6□□□□□ -0.87
IRF3-216ENST00000597180 KRTAP16-1A8MUX0 517 aa9.58□□□□□ -0.88
IRF3-216ENST00000597180 PRO0461Q9UI25 63 aa9.58□□□□□ -0.88
IRF3-216ENST00000597180 IGHV6-1A0A0B4J1U7 121 aa9.57□□□□□ -0.88
IRF3-216ENST00000597180 A0A1B0GVX0 72 aa9.57□□□□□ -0.88
IRF3-216ENST00000597180 ATP11AUNQ6ZP68 121 aa9.57□□□□□ -0.88
IRF3-216ENST00000597180 NOTCH2NLQ7Z3S9 236 aa9.57□□□□□ -0.88
IRF3-216ENST00000597180 LCE2AQ5TA79 106 aaPredicted RBP9.55□□□□□ -0.88
IRF3-216ENST00000597180 FAT4Q6V0I7 4981 aa9.54□□□□□ -0.88
IRF3-216ENST00000597180 C8orf87E5RJ46 101 aa9.54□□□□□ -0.88
IRF3-216ENST00000597180 NREPQ16612 68 aa9.52□□□□□ -0.89
IRF3-216ENST00000597180 GTF2H5Q6ZYL4 71 aa9.52□□□□□ -0.89
IRF3-216ENST00000597180 A8MWP4 228 aa9.5□□□□□ -0.89
IRF3-216ENST00000597180 NDUFB1O75438 58 aa9.5□□□□□ -0.89
IRF3-216ENST00000597180 KRTAP19-2Q3LHN2 52 aa9.5□□□□□ -0.89
IRF3-216ENST00000597180 LCE2CQ5TA81 110 aa9.46□□□□□ -0.9
IRF3-216ENST00000597180 IGKV3D-7A0A0C4DH55 119 aa9.45□□□□□ -0.9
IRF3-216ENST00000597180 F8W1H4 67 aa9.44□□□□□ -0.9
IRF3-216ENST00000597180 PRR15Q8IV56 129 aa9.43□□□□□ -0.9
IRF3-216ENST00000597180 C8orf17Q9NRJ1 99 aa9.43□□□□□ -0.9
IRF3-216ENST00000597180 Q6ZVQ6 151 aa9.4□□□□□ -0.9
IRF3-216ENST00000597180 Q8N9P0 234 aaPredicted RBP9.38□□□□□ -0.91
IRF3-216ENST00000597180 BPY2O14599 106 aa9.37□□□□□ -0.91
IRF3-216ENST00000597180 ETDBQ3ZM63 59 aa9.36□□□□□ -0.91
IRF3-216ENST00000597180 K7EQZ3 153 aa9.35□□□□□ -0.91
IRF3-216ENST00000597180 LINC00846Q9NV44 126 aa9.35□□□□□ -0.91
IRF3-216ENST00000597180 MMP24-AS1A0A0U1RRL7 71 aa9.34□□□□□ -0.91
IRF3-216ENST00000597180 MT1HP80294 61 aa9.32□□□□□ -0.92
IRF3-216ENST00000597180 ZCCHC13Q8WW36 166 aaKnown RBP9.32□□□□□ -0.92
IRF3-216ENST00000597180 TMEM254Q8TBM7 123 aa9.31□□□□□ -0.92
IRF3-216ENST00000597180 UBL5Q9BZL1 73 aa9.31□□□□□ -0.92
IRF3-216ENST00000597180 COX6B2Q6YFQ2 88 aa9.3□□□□□ -0.92
IRF3-216ENST00000597180 MRPL34Q9BQ48 92 aaKnown RBP9.28□□□□□ -0.92
IRF3-216ENST00000597180 hDV103S1A0JD37 113 aa9.27□□□□□ -0.93
IRF3-216ENST00000597180 Q8N9L7 120 aa9.25□□□□□ -0.93
IRF3-216ENST00000597180 HRES1P13985 223 aa9.21□□□□□ -0.94
IRF3-216ENST00000597180 FLGP20930 4061 aaPredicted RBP9.2□□□□□ -0.94
IRF3-216ENST00000597180 A0A1B0GV90 55 aa9.19□□□□□ -0.94
IRF3-216ENST00000597180 MPLKIPQ8TAP9 179 aa9.19□□□□□ -0.94
IRF3-216ENST00000597180 CASC2Q6XLA1 102 aa9.18□□□□□ -0.94
IRF3-216ENST00000597180 WFDC13Q8IUB5 93 aa9.18□□□□□ -0.94
IRF3-216ENST00000597180 SPINK7P58062 85 aa9.17□□□□□ -0.94
IRF3-216ENST00000597180 NDUFS5O43920 106 aa9.16□□□□□ -0.94
IRF3-216ENST00000597180 CXCL6P80162 114 aa9.16□□□□□ -0.94
IRF3-216ENST00000597180 ACYP1P07311 99 aa9.15□□□□□ -0.94
IRF3-216ENST00000597180 FAM240AA0A1B0GVK7 77 aa9.14□□□□□ -0.95
IRF3-216ENST00000597180 HCG22E2RYF7 251 aa9.13□□□□□ -0.95
IRF3-216ENST00000597180 RBM12B-AS1Q9P1G2 102 aa9.13□□□□□ -0.95
IRF3-216ENST00000597180 M0R2T5 61 aa9.12□□□□□ -0.95
IRF3-216ENST00000597180 KRTAP10-6P60371 365 aaPredicted RBP9.1□□□□□ -0.95
IRF3-216ENST00000597180 FAM236DA0A1B0GTK5 79 aa9.09□□□□□ -0.95
IRF3-216ENST00000597180 FAM236CP0DP71 79 aa9.09□□□□□ -0.95
IRF3-216ENST00000597180 LORP23490 312 aaPredicted RBP9.09□□□□□ -0.95
IRF3-216ENST00000597180 Q5W150 140 aa9.07□□□□□ -0.96
IRF3-216ENST00000597180 KRTAP9-2Q9BYQ4 174 aa9.04□□□□□ -0.96
IRF3-216ENST00000597180 ATP5EP2Q5VTU8 51 aa9.03□□□□□ -0.96
IRF3-216ENST00000597180 C7orf65Q6ZTY9 151 aa8.98□□□□□ -0.97
IRF3-216ENST00000597180 IGKV2D-30A0A075B6S6 120 aa8.97□□□□□ -0.97
IRF3-216ENST00000597180 IGKV2-30P06310 120 aa8.97□□□□□ -0.97
IRF3-216ENST00000597180 TP53AIP1Q9HCN2 124 aa8.96□□□□□ -0.98
IRF3-216ENST00000597180 LCE2DQ5TA82 110 aaPredicted RBP8.95□□□□□ -0.98
IRF3-216ENST00000597180 LINC00643Q86TS7 51 aa8.94□□□□□ -0.98
IRF3-216ENST00000597180 HIST1H4AP62805 103 aaKnown RBP8.89□□□□□ -0.99
IRF3-216ENST00000597180 J3QR89 54 aa8.88□□□□□ -0.99
IRF3-216ENST00000597180 KRTAP9-8Q9BYQ0 159 aa8.86□□□□□ -0.99
IRF3-216ENST00000597180 H1FX-AS1Q4G0G2 97 aa8.83□□□□□ -1
IRF3-216ENST00000597180 A0A087WVE0 104 aa8.81□□□□□ -1
IRF3-216ENST00000597180 C4orf26Q17RF5 130 aa8.8□□□□□ -1
IRF3-216ENST00000597180 TRAV22A0A0B4J277 110 aa8.78□□□□□ -1
IRF3-216ENST00000597180 UQCRQO14949 82 aa8.76□□□□□ -1.01
IRF3-216ENST00000597180 MT2AP02795 61 aa8.75□□□□□ -1.01
IRF3-216ENST00000597180 CYP4F30PQ9H0H9 118 aa8.73□□□□□ -1.01
IRF3-216ENST00000597180 LOC101927531A0A1B0GV80 90 aa8.71□□□□□ -1.02
IRF3-216ENST00000597180 KRTAP3-1Q9BYR8 98 aa8.7□□□□□ -1.02
IRF3-216ENST00000597180 MT1FP04733 61 aa8.69□□□□□ -1.02
IRF3-216ENST00000597180 H0Y9P7 68 aa8.68□□□□□ -1.02
IRF3-216ENST00000597180 ATOX1O00244 68 aa8.68□□□□□ -1.02
IRF3-216ENST00000597180 C1orf64Q8NEQ6 169 aa8.68□□□□□ -1.02
IRF3-216ENST00000597180 K7ERU9 68 aa8.66□□□□□ -1.02
IRF3-216ENST00000597180 OCR1Q9BZK8 76 aa8.66□□□□□ -1.02
IRF3-216ENST00000597180 KRTAP9-6A0A140TA67 174 aa8.65□□□□□ -1.02
IRF3-216ENST00000597180 KRTAP10-10P60014 251 aa8.63□□□□□ -1.03
IRF3-216ENST00000597180 IMUPQ9GZP8 106 aa8.59□□□□□ -1.03
IRF3-216ENST00000597180 CRCT1Q9UGL9 99 aa8.59□□□□□ -1.03
IRF3-216ENST00000597180 KRTAP9-3Q9BYQ3 159 aa8.58□□□□□ -1.04
IRF3-216ENST00000597180 S4R3F8 94 aa8.58□□□□□ -1.04
IRF3-216ENST00000597180 MT-ATP8P03928 68 aa8.55□□□□□ -1.04
IRF3-216ENST00000597180 MP68P56378 58 aa8.55□□□□□ -1.04
IRF3-216ENST00000597180 C5orf47Q569G3 176 aa8.55□□□□□ -1.04
IRF3-216ENST00000597180 LINC00208Q96KT6 92 aa8.55□□□□□ -1.04
IRF3-216ENST00000597180 SCGB1A1P11684 91 aa8.53□□□□□ -1.04
IRF3-216ENST00000597180 LCA10Q71F78 164 aa8.52□□□□□ -1.05
IRF3-216ENST00000597180 H3BPC8 53 aa8.49□□□□□ -1.05
IRF3-216ENST00000597180 KLKP1Q107X0 134 aa8.49□□□□□ -1.05
IRF3-216ENST00000597180 CSAG1Q6PB30 78 aa8.48□□□□□ -1.05
IRF3-216ENST00000597180 LCE2BO14633 110 aa8.47□□□□□ -1.05
IRF3-216ENST00000597180 KRTAP3-3Q9BYR6 98 aa8.45□□□□□ -1.06
IRF3-216ENST00000597180 FSIP2Q5CZC0 6907 aa8.45□□□□□ -1.06
IRF3-216ENST00000597180 A8MUN3 132 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms