RNA–Protein interactions for RNA: ENST00000596726.3

PNKP-209, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 637 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-209ENST00000596726 C21orf62-AS1Q17RA5 79 aa11.04□□□□□ -0.64
PNKP-209ENST00000596726 Q6ZQT0 140 aa11.04□□□□□ -0.64
PNKP-209ENST00000596726 LOC110117498A0A087WWA1 95 aa11.03□□□□□ -0.64
PNKP-209ENST00000596726 KRTAP16-1A8MUX0 517 aa11.02□□□□□ -0.65
PNKP-209ENST00000596726 NOTCH2NLQ7Z3S9 236 aa11.01□□□□□ -0.65
PNKP-209ENST00000596726 A0A1B0GW54 56 aa10.99□□□□□ -0.65
PNKP-209ENST00000596726 PDE6GP18545 87 aa10.99□□□□□ -0.65
PNKP-209ENST00000596726 MT1HP80294 61 aa10.99□□□□□ -0.65
PNKP-209ENST00000596726 IGHV6-1A0A0B4J1U7 121 aa10.96□□□□□ -0.65
PNKP-209ENST00000596726 C14orf132Q9NPU4 83 aa10.96□□□□□ -0.65
PNKP-209ENST00000596726 J3KT08 172 aa10.95□□□□□ -0.66
PNKP-209ENST00000596726 A0A1B0GVX0 72 aa10.94□□□□□ -0.66
PNKP-209ENST00000596726 H3BT86 120 aa10.93□□□□□ -0.66
PNKP-209ENST00000596726 C8orf87E5RJ46 101 aa10.92□□□□□ -0.66
PNKP-209ENST00000596726 KRTAP9-2Q9BYQ4 174 aa10.91□□□□□ -0.66
PNKP-209ENST00000596726 PRO0461Q9UI25 63 aa10.91□□□□□ -0.66
PNKP-209ENST00000596726 COX6B2Q6YFQ2 88 aa10.88□□□□□ -0.67
PNKP-209ENST00000596726 MTURNQ8N3F0 131 aa10.88□□□□□ -0.67
PNKP-209ENST00000596726 FLGP20930 4061 aaPredicted RBP10.88□□□□□ -0.67
PNKP-209ENST00000596726 NDUFB1O75438 58 aa10.83□□□□□ -0.68
PNKP-209ENST00000596726 A8MWP4 228 aa10.82□□□□□ -0.68
PNKP-209ENST00000596726 J3QR89 54 aa10.82□□□□□ -0.68
PNKP-209ENST00000596726 K7ERU9 68 aa10.81□□□□□ -0.68
PNKP-209ENST00000596726 SMCPP49901 116 aaPredicted RBP10.81□□□□□ -0.68
PNKP-209ENST00000596726 NREPQ16612 68 aa10.8□□□□□ -0.68
PNKP-209ENST00000596726 ETDBQ3ZM63 59 aa10.79□□□□□ -0.68
PNKP-209ENST00000596726 IGKV3D-7A0A0C4DH55 119 aa10.78□□□□□ -0.68
PNKP-209ENST00000596726 C8orf17Q9NRJ1 99 aa10.77□□□□□ -0.69
PNKP-209ENST00000596726 LORP23490 312 aaPredicted RBP10.75□□□□□ -0.69
PNKP-209ENST00000596726 KRTAP10-6P60371 365 aaPredicted RBP10.75□□□□□ -0.69
PNKP-209ENST00000596726 Q8N9P0 234 aaPredicted RBP10.75□□□□□ -0.69
PNKP-209ENST00000596726 PRR15Q8IV56 129 aa10.74□□□□□ -0.69
PNKP-209ENST00000596726 M0R2T5 61 aa10.73□□□□□ -0.69
PNKP-209ENST00000596726 LCE2DQ5TA82 110 aaPredicted RBP10.72□□□□□ -0.69
PNKP-209ENST00000596726 ZCCHC13Q8WW36 166 aaKnown RBP10.71□□□□□ -0.69
PNKP-209ENST00000596726 HRES1P13985 223 aa10.68□□□□□ -0.7
PNKP-209ENST00000596726 Q6ZVQ6 151 aa10.67□□□□□ -0.7
PNKP-209ENST00000596726 MPLKIPQ8TAP9 179 aa10.67□□□□□ -0.7
PNKP-209ENST00000596726 MMP24-AS1A0A0U1RRL7 71 aa10.65□□□□□ -0.7
PNKP-209ENST00000596726 K7EQZ3 153 aa10.63□□□□□ -0.71
PNKP-209ENST00000596726 BPY2O14599 106 aa10.61□□□□□ -0.71
PNKP-209ENST00000596726 TMEM254Q8TBM7 123 aa10.61□□□□□ -0.71
PNKP-209ENST00000596726 MRPL34Q9BQ48 92 aaKnown RBP10.59□□□□□ -0.71
PNKP-209ENST00000596726 RBM12B-AS1Q9P1G2 102 aa10.59□□□□□ -0.71
PNKP-209ENST00000596726 FAM240AA0A1B0GVK7 77 aa10.58□□□□□ -0.72
PNKP-209ENST00000596726 ACYP1P07311 99 aa10.58□□□□□ -0.72
PNKP-209ENST00000596726 SPINK7P58062 85 aa10.58□□□□□ -0.72
PNKP-209ENST00000596726 FAM236DA0A1B0GTK5 79 aa10.56□□□□□ -0.72
PNKP-209ENST00000596726 hDV103S1A0JD37 113 aa10.56□□□□□ -0.72
PNKP-209ENST00000596726 FAM236CP0DP71 79 aa10.56□□□□□ -0.72
PNKP-209ENST00000596726 LINC00846Q9NV44 126 aa10.52□□□□□ -0.73
PNKP-209ENST00000596726 Q8N9L7 120 aa10.49□□□□□ -0.73
PNKP-209ENST00000596726 KRTAP9-6A0A140TA67 174 aa10.48□□□□□ -0.73
PNKP-209ENST00000596726 UBL5Q9BZL1 73 aa10.48□□□□□ -0.73
PNKP-209ENST00000596726 NDUFS5O43920 106 aa10.45□□□□□ -0.74
PNKP-209ENST00000596726 KRTAP9-8Q9BYQ0 159 aa10.44□□□□□ -0.74
PNKP-209ENST00000596726 CASC2Q6XLA1 102 aa10.43□□□□□ -0.74
PNKP-209ENST00000596726 WFDC13Q8IUB5 93 aa10.43□□□□□ -0.74
PNKP-209ENST00000596726 Q5W150 140 aa10.38□□□□□ -0.75
PNKP-209ENST00000596726 HCG22E2RYF7 251 aa10.35□□□□□ -0.75
PNKP-209ENST00000596726 LINC00643Q86TS7 51 aa10.35□□□□□ -0.75
PNKP-209ENST00000596726 CRCT1Q9UGL9 99 aa10.34□□□□□ -0.75
PNKP-209ENST00000596726 FSIP2Q5CZC0 6907 aa10.31□□□□□ -0.76
PNKP-209ENST00000596726 CXCL6P80162 114 aa10.3□□□□□ -0.76
PNKP-209ENST00000596726 MT2AP02795 61 aa10.29□□□□□ -0.76
PNKP-209ENST00000596726 C7orf65Q6ZTY9 151 aa10.28□□□□□ -0.76
PNKP-209ENST00000596726 IGKV2D-30A0A075B6S6 120 aa10.27□□□□□ -0.77
PNKP-209ENST00000596726 IGKV2-30P06310 120 aa10.27□□□□□ -0.77
PNKP-209ENST00000596726 ATP5EP2Q5VTU8 51 aa10.27□□□□□ -0.77
PNKP-209ENST00000596726 IMUPQ9GZP8 106 aa10.26□□□□□ -0.77
PNKP-209ENST00000596726 SCGB1A1P11684 91 aa10.23□□□□□ -0.77
PNKP-209ENST00000596726 MT-ATP8P03928 68 aa10.22□□□□□ -0.77
PNKP-209ENST00000596726 MT1FP04733 61 aa10.21□□□□□ -0.77
PNKP-209ENST00000596726 H1FX-AS1Q4G0G2 97 aa10.19□□□□□ -0.78
PNKP-209ENST00000596726 KRTAP10-10P60014 251 aa10.14□□□□□ -0.79
PNKP-209ENST00000596726 TP53AIP1Q9HCN2 124 aa10.14□□□□□ -0.79
PNKP-209ENST00000596726 KRTAP9-3Q9BYQ3 159 aa10.11□□□□□ -0.79
PNKP-209ENST00000596726 C4orf26Q17RF5 130 aa10.1□□□□□ -0.79
PNKP-209ENST00000596726 USH2AO75445 5202 aa10.06□□□□□ -0.8
PNKP-209ENST00000596726 LCE2BO14633 110 aa10.02□□□□□ -0.81
PNKP-209ENST00000596726 HIST1H4AP62805 103 aaKnown RBP10.01□□□□□ -0.81
PNKP-209ENST00000596726 KRTAP3-1Q9BYR8 98 aa10□□□□□ -0.81
PNKP-209ENST00000596726 FAM236AA0A1B0GUQ0 79 aa9.94□□□□□ -0.82
PNKP-209ENST00000596726 FAM236BA0A1B0GV22 79 aa9.94□□□□□ -0.82
PNKP-209ENST00000596726 PCP4P48539 62 aa9.94□□□□□ -0.82
PNKP-209ENST00000596726 C1orf64Q8NEQ6 169 aa9.94□□□□□ -0.82
PNKP-209ENST00000596726 TRAV22A0A0B4J277 110 aa9.93□□□□□ -0.82
PNKP-209ENST00000596726 CYP4F30PQ9H0H9 118 aa9.93□□□□□ -0.82
PNKP-209ENST00000596726 SSPOA2VEC9 5147 aa9.93□□□□□ -0.82
PNKP-209ENST00000596726 ATOX1O00244 68 aa9.92□□□□□ -0.82
PNKP-209ENST00000596726 ANAPC13Q9BS18 74 aa9.89□□□□□ -0.83
PNKP-209ENST00000596726 A0A087WVE0 104 aa9.88□□□□□ -0.83
PNKP-209ENST00000596726 SMIM20Q8N5G0 67 aa9.88□□□□□ -0.83
PNKP-209ENST00000596726 UQCRQO14949 82 aa9.87□□□□□ -0.83
PNKP-209ENST00000596726 LOC101927531A0A1B0GV80 90 aa9.86□□□□□ -0.83
PNKP-209ENST00000596726 S4R3F8 94 aa9.85□□□□□ -0.83
PNKP-209ENST00000596726 C5orf47Q569G3 176 aa9.83□□□□□ -0.84
PNKP-209ENST00000596726 LCA10Q71F78 164 aa9.8□□□□□ -0.84
PNKP-209ENST00000596726 H0Y9P7 68 aa9.79□□□□□ -0.84
PNKP-209ENST00000596726 KRTAP19-1Q8IUB9 90 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms