RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 IGHV6-1A0A0B4J1U7 121 aa9.16□□□□□ -0.94
SHKBP1-212ENST00000596163 C8orf87E5RJ46 101 aa9.14□□□□□ -0.95
SHKBP1-212ENST00000596163 NDUFB1O75438 58 aa9.14□□□□□ -0.95
SHKBP1-212ENST00000596163 MTURNQ8N3F0 131 aa9.14□□□□□ -0.95
SHKBP1-212ENST00000596163 A0A1B0GVX0 72 aa9.13□□□□□ -0.95
SHKBP1-212ENST00000596163 PCP4L1A6NKN8 68 aa9.13□□□□□ -0.95
SHKBP1-212ENST00000596163 LCE2AQ5TA79 106 aaPredicted RBP9.12□□□□□ -0.95
SHKBP1-212ENST00000596163 NREPQ16612 68 aa9.11□□□□□ -0.95
SHKBP1-212ENST00000596163 KRTAP16-1A8MUX0 517 aa9.08□□□□□ -0.96
SHKBP1-212ENST00000596163 K7EP34 96 aa9.08□□□□□ -0.96
SHKBP1-212ENST00000596163 NOTCH2NLQ7Z3S9 236 aa9.08□□□□□ -0.96
SHKBP1-212ENST00000596163 A8MWP4 228 aa9.06□□□□□ -0.96
SHKBP1-212ENST00000596163 GTF2H5Q6ZYL4 71 aa9.06□□□□□ -0.96
SHKBP1-212ENST00000596163 KRTAP9-2Q9BYQ4 174 aa9.05□□□□□ -0.96
SHKBP1-212ENST00000596163 SMCPP49901 116 aaPredicted RBP9.03□□□□□ -0.96
SHKBP1-212ENST00000596163 COX6B2Q6YFQ2 88 aa9.01□□□□□ -0.97
SHKBP1-212ENST00000596163 KRTAP19-2Q3LHN2 52 aa9□□□□□ -0.97
SHKBP1-212ENST00000596163 LCE2CQ5TA81 110 aa9□□□□□ -0.97
SHKBP1-212ENST00000596163 PRO0461Q9UI25 63 aa9□□□□□ -0.97
SHKBP1-212ENST00000596163 IGKV3D-7A0A0C4DH55 119 aa8.99□□□□□ -0.97
SHKBP1-212ENST00000596163 C8orf17Q9NRJ1 99 aa8.99□□□□□ -0.97
SHKBP1-212ENST00000596163 PRR15Q8IV56 129 aa8.98□□□□□ -0.97
SHKBP1-212ENST00000596163 F8W1H4 67 aa8.96□□□□□ -0.98
SHKBP1-212ENST00000596163 BPY2O14599 106 aa8.95□□□□□ -0.98
SHKBP1-212ENST00000596163 Q8N9P0 234 aaPredicted RBP8.93□□□□□ -0.98
SHKBP1-212ENST00000596163 Q6ZVQ6 151 aa8.92□□□□□ -0.98
SHKBP1-212ENST00000596163 MT1HP80294 61 aa8.91□□□□□ -0.98
SHKBP1-212ENST00000596163 ZCCHC13Q8WW36 166 aaKnown RBP8.9□□□□□ -0.98
SHKBP1-212ENST00000596163 UBL5Q9BZL1 73 aa8.9□□□□□ -0.98
SHKBP1-212ENST00000596163 K7EQZ3 153 aa8.88□□□□□ -0.99
SHKBP1-212ENST00000596163 TMEM254Q8TBM7 123 aa8.88□□□□□ -0.99
SHKBP1-212ENST00000596163 MRPL34Q9BQ48 92 aaKnown RBP8.87□□□□□ -0.99
SHKBP1-212ENST00000596163 MMP24-AS1A0A0U1RRL7 71 aa8.86□□□□□ -0.99
SHKBP1-212ENST00000596163 hDV103S1A0JD37 113 aa8.86□□□□□ -0.99
SHKBP1-212ENST00000596163 M0R2T5 61 aa8.85□□□□□ -0.99
SHKBP1-212ENST00000596163 ETDBQ3ZM63 59 aa8.85□□□□□ -0.99
SHKBP1-212ENST00000596163 LINC00846Q9NV44 126 aa8.85□□□□□ -0.99
SHKBP1-212ENST00000596163 RBM12B-AS1Q9P1G2 102 aa8.83□□□□□ -1
SHKBP1-212ENST00000596163 KRTAP9-6A0A140TA67 174 aa8.8□□□□□ -1
SHKBP1-212ENST00000596163 NDUFS5O43920 106 aa8.8□□□□□ -1
SHKBP1-212ENST00000596163 FAM236DA0A1B0GTK5 79 aa8.79□□□□□ -1
SHKBP1-212ENST00000596163 FAM236CP0DP71 79 aa8.79□□□□□ -1
SHKBP1-212ENST00000596163 SPINK7P58062 85 aa8.78□□□□□ -1
SHKBP1-212ENST00000596163 HRES1P13985 223 aa8.77□□□□□ -1.01
SHKBP1-212ENST00000596163 CASC2Q6XLA1 102 aa8.77□□□□□ -1.01
SHKBP1-212ENST00000596163 Q8N9L7 120 aa8.77□□□□□ -1.01
SHKBP1-212ENST00000596163 WFDC13Q8IUB5 93 aa8.75□□□□□ -1.01
SHKBP1-212ENST00000596163 FLGP20930 4061 aaPredicted RBP8.75□□□□□ -1.01
SHKBP1-212ENST00000596163 MPLKIPQ8TAP9 179 aa8.74□□□□□ -1.01
SHKBP1-212ENST00000596163 ACYP1P07311 99 aa8.71□□□□□ -1.02
SHKBP1-212ENST00000596163 KRTAP10-6P60371 365 aaPredicted RBP8.71□□□□□ -1.02
SHKBP1-212ENST00000596163 CXCL6P80162 114 aa8.71□□□□□ -1.02
SHKBP1-212ENST00000596163 HCG22E2RYF7 251 aa8.7□□□□□ -1.02
SHKBP1-212ENST00000596163 LORP23490 312 aaPredicted RBP8.68□□□□□ -1.02
SHKBP1-212ENST00000596163 FAM240AA0A1B0GVK7 77 aa8.64□□□□□ -1.03
SHKBP1-212ENST00000596163 LCE2DQ5TA82 110 aaPredicted RBP8.63□□□□□ -1.03
SHKBP1-212ENST00000596163 A0A1B0GV90 55 aa8.62□□□□□ -1.03
SHKBP1-212ENST00000596163 Q5W150 140 aa8.61□□□□□ -1.03
SHKBP1-212ENST00000596163 IGKV2D-30A0A075B6S6 120 aa8.59□□□□□ -1.03
SHKBP1-212ENST00000596163 IGKV2-30P06310 120 aa8.59□□□□□ -1.03
SHKBP1-212ENST00000596163 C7orf65Q6ZTY9 151 aa8.59□□□□□ -1.03
SHKBP1-212ENST00000596163 TP53AIP1Q9HCN2 124 aa8.58□□□□□ -1.04
SHKBP1-212ENST00000596163 ATP5EP2Q5VTU8 51 aa8.57□□□□□ -1.04
SHKBP1-212ENST00000596163 FSIP2Q5CZC0 6907 aa8.51□□□□□ -1.05
SHKBP1-212ENST00000596163 CRCT1Q9UGL9 99 aa8.51□□□□□ -1.05
SHKBP1-212ENST00000596163 HIST1H4AP62805 103 aaKnown RBP8.48□□□□□ -1.05
SHKBP1-212ENST00000596163 LINC00643Q86TS7 51 aa8.48□□□□□ -1.05
SHKBP1-212ENST00000596163 H1FX-AS1Q4G0G2 97 aa8.47□□□□□ -1.05
SHKBP1-212ENST00000596163 J3QR89 54 aa8.46□□□□□ -1.06
SHKBP1-212ENST00000596163 KRTAP9-8Q9BYQ0 159 aa8.45□□□□□ -1.06
SHKBP1-212ENST00000596163 C4orf26Q17RF5 130 aa8.4□□□□□ -1.06
SHKBP1-212ENST00000596163 TRAV22A0A0B4J277 110 aa8.36□□□□□ -1.07
SHKBP1-212ENST00000596163 UQCRQO14949 82 aa8.36□□□□□ -1.07
SHKBP1-212ENST00000596163 MT2AP02795 61 aa8.36□□□□□ -1.07
SHKBP1-212ENST00000596163 LOC101927531A0A1B0GV80 90 aa8.33□□□□□ -1.08
SHKBP1-212ENST00000596163 A0A087WVE0 104 aa8.32□□□□□ -1.08
SHKBP1-212ENST00000596163 KRTAP10-10P60014 251 aa8.32□□□□□ -1.08
SHKBP1-212ENST00000596163 ATOX1O00244 68 aa8.31□□□□□ -1.08
SHKBP1-212ENST00000596163 C1orf64Q8NEQ6 169 aa8.31□□□□□ -1.08
SHKBP1-212ENST00000596163 CYP4F30PQ9H0H9 118 aa8.31□□□□□ -1.08
SHKBP1-212ENST00000596163 MT1FP04733 61 aa8.28□□□□□ -1.08
SHKBP1-212ENST00000596163 H0Y9P7 68 aa8.27□□□□□ -1.09
SHKBP1-212ENST00000596163 KRTAP3-1Q9BYR8 98 aa8.24□□□□□ -1.09
SHKBP1-212ENST00000596163 S4R3F8 94 aa8.21□□□□□ -1.1
SHKBP1-212ENST00000596163 K7ERU9 68 aa8.2□□□□□ -1.1
SHKBP1-212ENST00000596163 MP68P56378 58 aa8.19□□□□□ -1.1
SHKBP1-212ENST00000596163 KRTAP9-3Q9BYQ3 159 aa8.18□□□□□ -1.1
SHKBP1-212ENST00000596163 OCR1Q9BZK8 76 aa8.18□□□□□ -1.1
SHKBP1-212ENST00000596163 SCGB1A1P11684 91 aa8.17□□□□□ -1.1
SHKBP1-212ENST00000596163 CSAG1Q6PB30 78 aa8.17□□□□□ -1.1
SHKBP1-212ENST00000596163 C5orf47Q569G3 176 aa8.16□□□□□ -1.1
SHKBP1-212ENST00000596163 LINC00208Q96KT6 92 aa8.16□□□□□ -1.1
SHKBP1-212ENST00000596163 IMUPQ9GZP8 106 aa8.14□□□□□ -1.11
SHKBP1-212ENST00000596163 LCA10Q71F78 164 aa8.12□□□□□ -1.11
SHKBP1-212ENST00000596163 H3BPC8 53 aa8.1□□□□□ -1.11
SHKBP1-212ENST00000596163 A8MUN3 132 aa8.07□□□□□ -1.12
SHKBP1-212ENST00000596163 LCE2BO14633 110 aa8.07□□□□□ -1.12
SHKBP1-212ENST00000596163 MT-ATP8P03928 68 aa8.05□□□□□ -1.12
SHKBP1-212ENST00000596163 KLKP1Q107X0 134 aa8.04□□□□□ -1.12
SHKBP1-212ENST00000596163 FAM236AA0A1B0GUQ0 79 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 111.9 ms