RNA–Protein interactions for RNA: ENST00000595541.1

SIN3B-206, Transcript of SIN3 transcription regulator family member B, humanhuman

TSL 2 BASIC

Gene SIN3B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-206ENST00000595541 SPACA4Q8TDM5 124 aa9.8□□□□□ -0.84
SIN3B-206ENST00000595541 LINC01558Q9Y6Z2 57 aa9.8□□□□□ -0.84
SIN3B-206ENST00000595541 HECTD4Q9Y4D8 3996 aa9.79□□□□□ -0.84
SIN3B-206ENST00000595541 NBDYA0A0U1RRE5 68 aa9.79□□□□□ -0.84
SIN3B-206ENST00000595541 MRPL34Q9BQ48 92 aaKnown RBP9.79□□□□□ -0.84
SIN3B-206ENST00000595541 SPINK7P58062 85 aa9.77□□□□□ -0.84
SIN3B-206ENST00000595541 Q5W150 140 aa9.77□□□□□ -0.84
SIN3B-206ENST00000595541 C7orf65Q6ZTY9 151 aa9.77□□□□□ -0.84
SIN3B-206ENST00000595541 C8orf87E5RJ46 101 aa9.76□□□□□ -0.85
SIN3B-206ENST00000595541 CDC42SE1Q9NRR8 79 aa9.75□□□□□ -0.85
SIN3B-206ENST00000595541 PSORS1C2Q9UIG4 136 aa9.75□□□□□ -0.85
SIN3B-206ENST00000595541 PRR26Q8N8Z3 221 aa9.73□□□□□ -0.85
SIN3B-206ENST00000595541 MDFIQ99750 246 aa9.73□□□□□ -0.85
SIN3B-206ENST00000595541 STARD9Q9P2P6 4700 aa9.73□□□□□ -0.85
SIN3B-206ENST00000595541 DNAH17Q9UFH2 4485 aa9.72□□□□□ -0.85
SIN3B-206ENST00000595541 CDK2AP2O75956 126 aa9.71□□□□□ -0.85
SIN3B-206ENST00000595541 SPINK6Q6UWN8 80 aa9.71□□□□□ -0.85
SIN3B-206ENST00000595541 FBN3Q75N90 2809 aa9.71□□□□□ -0.86
SIN3B-206ENST00000595541 VPS13DQ5THJ4 4388 aa9.7□□□□□ -0.86
SIN3B-206ENST00000595541 KRTAP13-3Q3SY46 172 aa9.69□□□□□ -0.86
SIN3B-206ENST00000595541 IGLV5-52A0A0A0MRZ9 124 aa9.69□□□□□ -0.86
SIN3B-206ENST00000595541 DNAH2Q9P225 4427 aa9.68□□□□□ -0.86
SIN3B-206ENST00000595541 KMT2AQ03164 3969 aa9.68□□□□□ -0.86
SIN3B-206ENST00000595541 H3BS24 57 aa9.68□□□□□ -0.86
SIN3B-206ENST00000595541 A0A087WTM6 91 aa9.66□□□□□ -0.86
SIN3B-206ENST00000595541 ZNF861PO60384 105 aa9.65□□□□□ -0.86
SIN3B-206ENST00000595541 ZNF706Q9Y5V0 76 aaPredicted RBP9.65□□□□□ -0.86
SIN3B-206ENST00000595541 ALMS1Q8TCU4 4167 aa9.64□□□□□ -0.87
SIN3B-206ENST00000595541 TGP01266 2768 aa9.64□□□□□ -0.87
SIN3B-206ENST00000595541 PRAC1Q96KF2 57 aa9.62□□□□□ -0.87
SIN3B-206ENST00000595541 MEGF8Q7Z7M0 2845 aa9.62□□□□□ -0.87
SIN3B-206ENST00000595541 RTL8CO15255 209 aa9.61□□□□□ -0.87
SIN3B-206ENST00000595541 CIRBP-AS1Q8TBR5 109 aa9.59□□□□□ -0.87
SIN3B-206ENST00000595541 LINC00313P59037 77 aa9.58□□□□□ -0.88
SIN3B-206ENST00000595541 PRKDCP78527 4128 aaKnown RBP9.56□□□□□ -0.88
SIN3B-206ENST00000595541 RETNLBQ9BQ08 111 aa9.56□□□□□ -0.88
SIN3B-206ENST00000595541 DNAH6Q9C0G6 4158 aa9.53□□□□□ -0.88
SIN3B-206ENST00000595541 NUPR2A6NF83 97 aa9.52□□□□□ -0.88
SIN3B-206ENST00000595541 ADM2Q7Z4H4 148 aa9.52□□□□□ -0.88
SIN3B-206ENST00000595541 ACYP2P14621 99 aa9.52□□□□□ -0.89
SIN3B-206ENST00000595541 IGLV7-43P04211 117 aa9.51□□□□□ -0.89
SIN3B-206ENST00000595541 DMAC1Q96GE9 116 aa9.49□□□□□ -0.89
SIN3B-206ENST00000595541 DNAH11Q96DT5 4516 aa9.48□□□□□ -0.89
SIN3B-206ENST00000595541 LINC01554Q52M75 96 aa9.47□□□□□ -0.89
SIN3B-206ENST00000595541 DNAH5Q8TE73 4624 aa9.41□□□□□ -0.9
SIN3B-206ENST00000595541 IGKV2-30P06310 120 aa9.41□□□□□ -0.9
SIN3B-206ENST00000595541 SSBP3-AS1Q7Z2R9 100 aa9.4□□□□□ -0.9
SIN3B-206ENST00000595541 LRP1BQ9NZR2 4599 aa9.39□□□□□ -0.91
SIN3B-206ENST00000595541 KRTAP13-2Q52LG2 175 aa9.39□□□□□ -0.91
SIN3B-206ENST00000595541 FAM229AH3BQW9 127 aa9.39□□□□□ -0.91
SIN3B-206ENST00000595541 A0A1B0GU69 56 aa9.38□□□□□ -0.91
SIN3B-206ENST00000595541 KRTAP16-1A8MUX0 517 aa9.37□□□□□ -0.91
SIN3B-206ENST00000595541 KRTAP21-3Q3LHN1 58 aa9.34□□□□□ -0.91
SIN3B-206ENST00000595541 PLA2G1BP04054 148 aaKnown RBP9.33□□□□□ -0.92
SIN3B-206ENST00000595541 SPATA8Q6RVD6 105 aa9.33□□□□□ -0.92
SIN3B-206ENST00000595541 KRTAP10-2P60368 255 aa9.31□□□□□ -0.92
SIN3B-206ENST00000595541 C1orf134Q5TEV5 83 aa9.31□□□□□ -0.92
SIN3B-206ENST00000595541 IGKV2D-30A0A075B6S6 120 aa9.3□□□□□ -0.92
SIN3B-206ENST00000595541 MIR22HGQ0VDD5 57 aa9.26□□□□□ -0.93
SIN3B-206ENST00000595541 UQCR11O14957 56 aa9.23□□□□□ -0.93
SIN3B-206ENST00000595541 VPS13BQ7Z7G8 4022 aa9.22□□□□□ -0.93
SIN3B-206ENST00000595541 PKD1P98161 4303 aa9.22□□□□□ -0.93
SIN3B-206ENST00000595541 KRTAP1-4P0C5Y4 121 aa9.21□□□□□ -0.93
SIN3B-206ENST00000595541 LY6G6CO95867 125 aa9.2□□□□□ -0.94
SIN3B-206ENST00000595541 CSAG1Q6PB30 78 aa9.2□□□□□ -0.94
SIN3B-206ENST00000595541 KRTAP10-1P60331 282 aa9.17□□□□□ -0.94
SIN3B-206ENST00000595541 SPINK1P00995 79 aa9.17□□□□□ -0.94
SIN3B-206ENST00000595541 FAT2Q9NYQ8 4349 aa9.17□□□□□ -0.94
SIN3B-206ENST00000595541 Q8N1X5 172 aa9.15□□□□□ -0.94
SIN3B-206ENST00000595541 HYDINQ4G0P3 5121 aa9.14□□□□□ -0.95
SIN3B-206ENST00000595541 DNHD1Q96M86 4753 aa9.13□□□□□ -0.95
SIN3B-206ENST00000595541 Q6ZSA8 131 aa9.12□□□□□ -0.95
SIN3B-206ENST00000595541 TYMSOSQ8TAI1 123 aa9.03□□□□□ -0.96
SIN3B-206ENST00000595541 H0YAA0 97 aa8.98□□□□□ -0.97
SIN3B-206ENST00000595541 PKHD1P08F94 4074 aa8.97□□□□□ -0.97
SIN3B-206ENST00000595541 KRTAP3-1Q9BYR8 98 aa8.95□□□□□ -0.98
SIN3B-206ENST00000595541 C9orf92A6NGG3 77 aa8.9□□□□□ -0.98
SIN3B-206ENST00000595541 LINC00304Q8N9R0 145 aa8.89□□□□□ -0.99
SIN3B-206ENST00000595541 A8MUU9 505 aa8.88□□□□□ -0.99
SIN3B-206ENST00000595541 SACSQ9NZJ4 4579 aa8.86□□□□□ -0.99
SIN3B-206ENST00000595541 ROMO1P60602 79 aa8.86□□□□□ -0.99
SIN3B-206ENST00000595541 FLG2Q5D862 2391 aaPredicted RBP8.84□□□□□ -0.99
SIN3B-206ENST00000595541 FAT1Q14517 4588 aa8.83□□□□□ -1
SIN3B-206ENST00000595541 A0A1B0GU33 70 aa8.82□□□□□ -1
SIN3B-206ENST00000595541 C20orf166-AS1Q96NR2 134 aa8.8□□□□□ -1
SIN3B-206ENST00000595541 SMR3BP02814 79 aaPredicted RBP8.78□□□□□ -1
SIN3B-206ENST00000595541 H1FX-AS1Q4G0G2 97 aa8.78□□□□□ -1
SIN3B-206ENST00000595541 RPS29P62273 56 aaKnown RBP8.77□□□□□ -1.01
SIN3B-206ENST00000595541 KRTAP25-1Q3LHN0 102 aa8.77□□□□□ -1.01
SIN3B-206ENST00000595541 DYNC1H1Q14204 4646 aaKnown RBP8.77□□□□□ -1.01
SIN3B-206ENST00000595541 PKHD1L1Q86WI1 4243 aa8.75□□□□□ -1.01
SIN3B-206ENST00000595541 CRIPTQ9P021 101 aa8.71□□□□□ -1.02
SIN3B-206ENST00000595541 APOBP04114 4563 aaKnown RBP8.69□□□□□ -1.02
SIN3B-206ENST00000595541 COX6B2Q6YFQ2 88 aa8.67□□□□□ -1.02
SIN3B-206ENST00000595541 P0C880 135 aa8.66□□□□□ -1.02
SIN3B-206ENST00000595541 KRTAP10-4P60372 401 aaPredicted RBP8.62□□□□□ -1.03
SIN3B-206ENST00000595541 DMBT1Q9UGM3 2413 aaPredicted RBP8.56□□□□□ -1.04
SIN3B-206ENST00000595541 HSPG2P98160 4391 aa8.55□□□□□ -1.04
SIN3B-206ENST00000595541 KRTAP10-6P60371 365 aaPredicted RBP8.54□□□□□ -1.04
SIN3B-206ENST00000595541 KRTAP13-4Q3LI77 160 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 156.9 ms