RNA–Protein interactions for RNA: ENST00000594387.1

IRF3-208, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-208ENST00000594387 A0A1B0GVX0 72 aa9.01□□□□□ -0.97
IRF3-208ENST00000594387 Q6ZQT0 140 aa9.01□□□□□ -0.97
IRF3-208ENST00000594387 LOC110117498A0A087WWA1 95 aa8.99□□□□□ -0.97
IRF3-208ENST00000594387 LOC105371267A0A1B0GV96 52 aa8.98□□□□□ -0.97
IRF3-208ENST00000594387 KRTAP16-1A8MUX0 517 aa8.97□□□□□ -0.97
IRF3-208ENST00000594387 NOTCH2NLQ7Z3S9 236 aa8.97□□□□□ -0.97
IRF3-208ENST00000594387 C14orf132Q9NPU4 83 aa8.97□□□□□ -0.97
IRF3-208ENST00000594387 C9orf118A6NHY6 69 aa8.96□□□□□ -0.98
IRF3-208ENST00000594387 LCE2DQ5TA82 110 aaPredicted RBP8.92□□□□□ -0.98
IRF3-208ENST00000594387 A0A1W2PPM0 123 aa8.91□□□□□ -0.98
IRF3-208ENST00000594387 H3BT86 120 aa8.91□□□□□ -0.98
IRF3-208ENST00000594387 NREPQ16612 68 aa8.91□□□□□ -0.98
IRF3-208ENST00000594387 FAM236DA0A1B0GTK5 79 aa8.9□□□□□ -0.98
IRF3-208ENST00000594387 FAM236CP0DP71 79 aa8.9□□□□□ -0.98
IRF3-208ENST00000594387 KRTAP10-6P60371 365 aaPredicted RBP8.9□□□□□ -0.98
IRF3-208ENST00000594387 A8MWP4 228 aa8.89□□□□□ -0.99
IRF3-208ENST00000594387 TAX1BP3O14907 124 aa8.89□□□□□ -0.99
IRF3-208ENST00000594387 RBM12B-AS1Q9P1G2 102 aa8.89□□□□□ -0.99
IRF3-208ENST00000594387 LORP23490 312 aaPredicted RBP8.87□□□□□ -0.99
IRF3-208ENST00000594387 C8orf17Q9NRJ1 99 aa8.85□□□□□ -0.99
IRF3-208ENST00000594387 ZCCHC13Q8WW36 166 aaKnown RBP8.83□□□□□ -1
IRF3-208ENST00000594387 KRTAP9-6A0A140TA67 174 aa8.82□□□□□ -1
IRF3-208ENST00000594387 MTURNQ8N3F0 131 aa8.82□□□□□ -1
IRF3-208ENST00000594387 IGKV3D-7A0A0C4DH55 119 aa8.81□□□□□ -1
IRF3-208ENST00000594387 SPCS1Q9Y6A9 102 aa8.81□□□□□ -1
IRF3-208ENST00000594387 PRR15Q8IV56 129 aa8.8□□□□□ -1
IRF3-208ENST00000594387 Q8N9P0 234 aaPredicted RBP8.8□□□□□ -1
IRF3-208ENST00000594387 Q6ZVQ6 151 aa8.79□□□□□ -1
IRF3-208ENST00000594387 COL5A1-AS1Q5SY13 56 aa8.77□□□□□ -1.01
IRF3-208ENST00000594387 HRES1P13985 223 aa8.76□□□□□ -1.01
IRF3-208ENST00000594387 BPY2O14599 106 aa8.74□□□□□ -1.01
IRF3-208ENST00000594387 SPINK7P58062 85 aa8.74□□□□□ -1.01
IRF3-208ENST00000594387 TMEM254Q8TBM7 123 aa8.73□□□□□ -1.01
IRF3-208ENST00000594387 MRPL34Q9BQ48 92 aaKnown RBP8.72□□□□□ -1.01
IRF3-208ENST00000594387 NDUFS5O43920 106 aa8.71□□□□□ -1.02
IRF3-208ENST00000594387 hDV103S1A0JD37 113 aa8.7□□□□□ -1.02
IRF3-208ENST00000594387 MPLKIPQ8TAP9 179 aa8.7□□□□□ -1.02
IRF3-208ENST00000594387 MMP24-AS1A0A0U1RRL7 71 aa8.69□□□□□ -1.02
IRF3-208ENST00000594387 K7EQZ3 153 aa8.69□□□□□ -1.02
IRF3-208ENST00000594387 FLGP20930 4061 aaPredicted RBP8.69□□□□□ -1.02
IRF3-208ENST00000594387 CRCT1Q9UGL9 99 aa8.67□□□□□ -1.02
IRF3-208ENST00000594387 K7EP34 96 aa8.65□□□□□ -1.02
IRF3-208ENST00000594387 SMCPP49901 116 aaPredicted RBP8.64□□□□□ -1.03
IRF3-208ENST00000594387 GTF2H5Q6ZYL4 71 aa8.64□□□□□ -1.03
IRF3-208ENST00000594387 UBL5Q9BZL1 73 aa8.63□□□□□ -1.03
IRF3-208ENST00000594387 WFDC13Q8IUB5 93 aa8.62□□□□□ -1.03
IRF3-208ENST00000594387 CASC2Q6XLA1 102 aa8.59□□□□□ -1.03
IRF3-208ENST00000594387 PCP4L1A6NKN8 68 aa8.58□□□□□ -1.04
IRF3-208ENST00000594387 PRO0461Q9UI25 63 aa8.58□□□□□ -1.04
IRF3-208ENST00000594387 KRTAP9-8Q9BYQ0 159 aa8.57□□□□□ -1.04
IRF3-208ENST00000594387 Q8N9L7 120 aa8.56□□□□□ -1.04
IRF3-208ENST00000594387 FSIP2Q5CZC0 6907 aa8.55□□□□□ -1.04
IRF3-208ENST00000594387 F8W1H4 67 aa8.54□□□□□ -1.04
IRF3-208ENST00000594387 LINC00846Q9NV44 126 aa8.54□□□□□ -1.04
IRF3-208ENST00000594387 HCG22E2RYF7 251 aa8.53□□□□□ -1.04
IRF3-208ENST00000594387 IGKV2D-30A0A075B6S6 120 aa8.52□□□□□ -1.05
IRF3-208ENST00000594387 IGKV2-30P06310 120 aa8.52□□□□□ -1.05
IRF3-208ENST00000594387 CXCL6P80162 114 aa8.5□□□□□ -1.05
IRF3-208ENST00000594387 C7orf65Q6ZTY9 151 aa8.5□□□□□ -1.05
IRF3-208ENST00000594387 KRTAP10-10P60014 251 aa8.48□□□□□ -1.05
IRF3-208ENST00000594387 MT2AP02795 61 aa8.47□□□□□ -1.05
IRF3-208ENST00000594387 Q5W150 140 aa8.46□□□□□ -1.06
IRF3-208ENST00000594387 ETDBQ3ZM63 59 aa8.45□□□□□ -1.06
IRF3-208ENST00000594387 H1FX-AS1Q4G0G2 97 aa8.45□□□□□ -1.06
IRF3-208ENST00000594387 MT1FP04733 61 aa8.39□□□□□ -1.07
IRF3-208ENST00000594387 TP53AIP1Q9HCN2 124 aa8.37□□□□□ -1.07
IRF3-208ENST00000594387 ACYP1P07311 99 aa8.34□□□□□ -1.07
IRF3-208ENST00000594387 C4orf26Q17RF5 130 aa8.33□□□□□ -1.08
IRF3-208ENST00000594387 KRTAP9-3Q9BYQ3 159 aa8.3□□□□□ -1.08
IRF3-208ENST00000594387 FAM240AA0A1B0GVK7 77 aa8.24□□□□□ -1.09
IRF3-208ENST00000594387 ATP5EP2Q5VTU8 51 aa8.24□□□□□ -1.09
IRF3-208ENST00000594387 LCE2BO14633 110 aa8.23□□□□□ -1.09
IRF3-208ENST00000594387 C1orf64Q8NEQ6 169 aa8.22□□□□□ -1.09
IRF3-208ENST00000594387 HIST1H4AP62805 103 aaKnown RBP8.21□□□□□ -1.1
IRF3-208ENST00000594387 S4R3F8 94 aa8.18□□□□□ -1.1
IRF3-208ENST00000594387 TRAV22A0A0B4J277 110 aa8.16□□□□□ -1.1
IRF3-208ENST00000594387 C5orf47Q569G3 176 aa8.15□□□□□ -1.1
IRF3-208ENST00000594387 LOC101927531A0A1B0GV80 90 aa8.14□□□□□ -1.11
IRF3-208ENST00000594387 CSAG1Q6PB30 78 aa8.14□□□□□ -1.11
IRF3-208ENST00000594387 USH2AO75445 5202 aa8.14□□□□□ -1.11
IRF3-208ENST00000594387 CYP4F30PQ9H0H9 118 aa8.13□□□□□ -1.11
IRF3-208ENST00000594387 FAM236AA0A1B0GUQ0 79 aa8.11□□□□□ -1.11
IRF3-208ENST00000594387 FAM236BA0A1B0GV22 79 aa8.11□□□□□ -1.11
IRF3-208ENST00000594387 KRTAP19-1Q8IUB9 90 aa8.11□□□□□ -1.11
IRF3-208ENST00000594387 KRTAP3-1Q9BYR8 98 aa8.11□□□□□ -1.11
IRF3-208ENST00000594387 UQCRQO14949 82 aa8.1□□□□□ -1.11
IRF3-208ENST00000594387 LINC00643Q86TS7 51 aa8.1□□□□□ -1.11
IRF3-208ENST00000594387 A0A1B0GV90 55 aa8.08□□□□□ -1.12
IRF3-208ENST00000594387 ATOX1O00244 68 aa8.08□□□□□ -1.12
IRF3-208ENST00000594387 LCA10Q71F78 164 aa8.07□□□□□ -1.12
IRF3-208ENST00000594387 H0Y9P7 68 aa8.05□□□□□ -1.12
IRF3-208ENST00000594387 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.04□□□□□ -1.12
IRF3-208ENST00000594387 SSPOA2VEC9 5147 aa8.04□□□□□ -1.12
IRF3-208ENST00000594387 J3QR89 54 aa8.02□□□□□ -1.13
IRF3-208ENST00000594387 A0A087WVE0 104 aa8.01□□□□□ -1.13
IRF3-208ENST00000594387 KRTAP19-6Q3LI70 58 aa7.98□□□□□ -1.13
IRF3-208ENST00000594387 MP68P56378 58 aa7.96□□□□□ -1.14
IRF3-208ENST00000594387 KRTAP9-7A8MTY7 169 aa7.95□□□□□ -1.14
IRF3-208ENST00000594387 LINC00208Q96KT6 92 aa7.93□□□□□ -1.14
IRF3-208ENST00000594387 NDUFC1O43677 76 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms