RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 COL5A1-AS1Q5SY13 56 aa9.25□□□□□ -0.93
SHKBP1-203ENST00000594298 Q75L30 129 aa9.25□□□□□ -0.93
SHKBP1-203ENST00000594298 H3BT86 120 aa9.24□□□□□ -0.93
SHKBP1-203ENST00000594298 ATP11AUNQ6ZP68 121 aa9.24□□□□□ -0.93
SHKBP1-203ENST00000594298 Q6ZQT0 140 aa9.24□□□□□ -0.93
SHKBP1-203ENST00000594298 FLGP20930 4061 aaPredicted RBP9.23□□□□□ -0.93
SHKBP1-203ENST00000594298 LINC00313P59037 77 aa9.22□□□□□ -0.93
SHKBP1-203ENST00000594298 DEFB116Q30KQ4 102 aa9.22□□□□□ -0.93
SHKBP1-203ENST00000594298 C14orf132Q9NPU4 83 aa9.21□□□□□ -0.94
SHKBP1-203ENST00000594298 SPCS1Q9Y6A9 102 aa9.21□□□□□ -0.94
SHKBP1-203ENST00000594298 J3KT08 172 aa9.2□□□□□ -0.94
SHKBP1-203ENST00000594298 DSCR10P59022 87 aa9.2□□□□□ -0.94
SHKBP1-203ENST00000594298 C20orf166-AS1Q96NR2 134 aa9.18□□□□□ -0.94
SHKBP1-203ENST00000594298 A8MUU9 505 aa9.17□□□□□ -0.94
SHKBP1-203ENST00000594298 IGHV6-1A0A0B4J1U7 121 aa9.16□□□□□ -0.94
SHKBP1-203ENST00000594298 C8orf87E5RJ46 101 aa9.14□□□□□ -0.95
SHKBP1-203ENST00000594298 NDUFB1O75438 58 aa9.14□□□□□ -0.95
SHKBP1-203ENST00000594298 MTURNQ8N3F0 131 aa9.14□□□□□ -0.95
SHKBP1-203ENST00000594298 A0A1B0GVX0 72 aa9.13□□□□□ -0.95
SHKBP1-203ENST00000594298 PCP4L1A6NKN8 68 aa9.13□□□□□ -0.95
SHKBP1-203ENST00000594298 NREPQ16612 68 aa9.11□□□□□ -0.95
SHKBP1-203ENST00000594298 KRTAP16-1A8MUX0 517 aa9.08□□□□□ -0.96
SHKBP1-203ENST00000594298 K7EP34 96 aa9.08□□□□□ -0.96
SHKBP1-203ENST00000594298 NOTCH2NLQ7Z3S9 236 aa9.08□□□□□ -0.96
SHKBP1-203ENST00000594298 A8MWP4 228 aa9.06□□□□□ -0.96
SHKBP1-203ENST00000594298 GTF2H5Q6ZYL4 71 aa9.06□□□□□ -0.96
SHKBP1-203ENST00000594298 SMCPP49901 116 aaPredicted RBP9.03□□□□□ -0.96
SHKBP1-203ENST00000594298 PRO0461Q9UI25 63 aa9□□□□□ -0.97
SHKBP1-203ENST00000594298 IGKV3D-7A0A0C4DH55 119 aa8.99□□□□□ -0.97
SHKBP1-203ENST00000594298 C8orf17Q9NRJ1 99 aa8.99□□□□□ -0.97
SHKBP1-203ENST00000594298 PRR15Q8IV56 129 aa8.98□□□□□ -0.97
SHKBP1-203ENST00000594298 KRTAP9-8Q9BYQ0 159 aa8.98□□□□□ -0.97
SHKBP1-203ENST00000594298 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.96□□□□□ -0.98
SHKBP1-203ENST00000594298 F8W1H4 67 aa8.96□□□□□ -0.98
SHKBP1-203ENST00000594298 USH2AO75445 5202 aa8.95□□□□□ -0.98
SHKBP1-203ENST00000594298 BPY2O14599 106 aa8.95□□□□□ -0.98
SHKBP1-203ENST00000594298 KRTAP9-7A8MTY7 169 aa8.94□□□□□ -0.98
SHKBP1-203ENST00000594298 Q8N9P0 234 aaPredicted RBP8.93□□□□□ -0.98
SHKBP1-203ENST00000594298 SSPOA2VEC9 5147 aa8.93□□□□□ -0.98
SHKBP1-203ENST00000594298 Q6ZVQ6 151 aa8.92□□□□□ -0.98
SHKBP1-203ENST00000594298 ZCCHC13Q8WW36 166 aaKnown RBP8.9□□□□□ -0.98
SHKBP1-203ENST00000594298 UBL5Q9BZL1 73 aa8.9□□□□□ -0.98
SHKBP1-203ENST00000594298 K7EQZ3 153 aa8.88□□□□□ -0.99
SHKBP1-203ENST00000594298 TMEM254Q8TBM7 123 aa8.88□□□□□ -0.99
SHKBP1-203ENST00000594298 MRPL34Q9BQ48 92 aaKnown RBP8.87□□□□□ -0.99
SHKBP1-203ENST00000594298 MMP24-AS1A0A0U1RRL7 71 aa8.86□□□□□ -0.99
SHKBP1-203ENST00000594298 hDV103S1A0JD37 113 aa8.86□□□□□ -0.99
SHKBP1-203ENST00000594298 ETDBQ3ZM63 59 aa8.85□□□□□ -0.99
SHKBP1-203ENST00000594298 LINC00846Q9NV44 126 aa8.85□□□□□ -0.99
SHKBP1-203ENST00000594298 RBM12B-AS1Q9P1G2 102 aa8.83□□□□□ -1
SHKBP1-203ENST00000594298 NDUFS5O43920 106 aa8.8□□□□□ -1
SHKBP1-203ENST00000594298 MT2AP02795 61 aa8.8□□□□□ -1
SHKBP1-203ENST00000594298 FAM236DA0A1B0GTK5 79 aa8.79□□□□□ -1
SHKBP1-203ENST00000594298 FAM236CP0DP71 79 aa8.79□□□□□ -1
SHKBP1-203ENST00000594298 SPINK7P58062 85 aa8.78□□□□□ -1
SHKBP1-203ENST00000594298 HRES1P13985 223 aa8.77□□□□□ -1.01
SHKBP1-203ENST00000594298 CASC2Q6XLA1 102 aa8.77□□□□□ -1.01
SHKBP1-203ENST00000594298 Q8N9L7 120 aa8.77□□□□□ -1.01
SHKBP1-203ENST00000594298 FCGBPQ9Y6R7 5405 aaPredicted RBP8.76□□□□□ -1.01
SHKBP1-203ENST00000594298 WFDC13Q8IUB5 93 aa8.75□□□□□ -1.01
SHKBP1-203ENST00000594298 MPLKIPQ8TAP9 179 aa8.74□□□□□ -1.01
SHKBP1-203ENST00000594298 LCE2BO14633 110 aa8.73□□□□□ -1.01
SHKBP1-203ENST00000594298 MT1FP04733 61 aa8.73□□□□□ -1.01
SHKBP1-203ENST00000594298 ACYP1P07311 99 aa8.71□□□□□ -1.02
SHKBP1-203ENST00000594298 CXCL6P80162 114 aa8.71□□□□□ -1.02
SHKBP1-203ENST00000594298 KRTAP19-1Q8IUB9 90 aa8.71□□□□□ -1.02
SHKBP1-203ENST00000594298 KRTAP9-3Q9BYQ3 159 aa8.71□□□□□ -1.02
SHKBP1-203ENST00000594298 HCG22E2RYF7 251 aa8.7□□□□□ -1.02
SHKBP1-203ENST00000594298 KRTAP10-10P60014 251 aa8.66□□□□□ -1.02
SHKBP1-203ENST00000594298 MACF1Q9UPN3 7388 aaKnown RBP8.66□□□□□ -1.02
SHKBP1-203ENST00000594298 FAM240AA0A1B0GVK7 77 aa8.64□□□□□ -1.03
SHKBP1-203ENST00000594298 A0A1B0GV90 55 aa8.62□□□□□ -1.03
SHKBP1-203ENST00000594298 Q5W150 140 aa8.61□□□□□ -1.03
SHKBP1-203ENST00000594298 SYNE2Q8WXH0 6885 aaKnown RBP8.6□□□□□ -1.03
SHKBP1-203ENST00000594298 IGKV2D-30A0A075B6S6 120 aa8.59□□□□□ -1.03
SHKBP1-203ENST00000594298 IGKV2-30P06310 120 aa8.59□□□□□ -1.03
SHKBP1-203ENST00000594298 C7orf65Q6ZTY9 151 aa8.59□□□□□ -1.03
SHKBP1-203ENST00000594298 TP53AIP1Q9HCN2 124 aa8.58□□□□□ -1.04
SHKBP1-203ENST00000594298 ATP5EP2Q5VTU8 51 aa8.57□□□□□ -1.04
SHKBP1-203ENST00000594298 KRTAP19-6Q3LI70 58 aa8.49□□□□□ -1.05
SHKBP1-203ENST00000594298 HIST1H4AP62805 103 aaKnown RBP8.48□□□□□ -1.05
SHKBP1-203ENST00000594298 LINC00643Q86TS7 51 aa8.48□□□□□ -1.05
SHKBP1-203ENST00000594298 H1FX-AS1Q4G0G2 97 aa8.47□□□□□ -1.05
SHKBP1-203ENST00000594298 J3QR89 54 aa8.46□□□□□ -1.06
SHKBP1-203ENST00000594298 C4orf26Q17RF5 130 aa8.4□□□□□ -1.06
SHKBP1-203ENST00000594298 TRAV22A0A0B4J277 110 aa8.36□□□□□ -1.07
SHKBP1-203ENST00000594298 UQCRQO14949 82 aa8.36□□□□□ -1.07
SHKBP1-203ENST00000594298 LOC101927531A0A1B0GV80 90 aa8.33□□□□□ -1.08
SHKBP1-203ENST00000594298 A0A087WVE0 104 aa8.32□□□□□ -1.08
SHKBP1-203ENST00000594298 ATOX1O00244 68 aa8.31□□□□□ -1.08
SHKBP1-203ENST00000594298 C1orf64Q8NEQ6 169 aa8.31□□□□□ -1.08
SHKBP1-203ENST00000594298 CYP4F30PQ9H0H9 118 aa8.31□□□□□ -1.08
SHKBP1-203ENST00000594298 KRTAP6-3Q3LI67 103 aa8.29□□□□□ -1.08
SHKBP1-203ENST00000594298 H0Y9P7 68 aa8.27□□□□□ -1.09
SHKBP1-203ENST00000594298 KRTAP3-1Q9BYR8 98 aa8.24□□□□□ -1.09
SHKBP1-203ENST00000594298 S4R3F8 94 aa8.21□□□□□ -1.1
SHKBP1-203ENST00000594298 K7ERU9 68 aa8.2□□□□□ -1.1
SHKBP1-203ENST00000594298 MP68P56378 58 aa8.19□□□□□ -1.1
SHKBP1-203ENST00000594298 OCR1Q9BZK8 76 aa8.18□□□□□ -1.1
SHKBP1-203ENST00000594298 SCGB1A1P11684 91 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms