RNA–Protein interactions for RNA: ENST00000594081.1

SMG9-202, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG9, Length 563 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-202ENST00000594081 IGFL1Q6UW32 110 aa4.23□□□□□ -1.73
SMG9-202ENST00000594081 C20orf166-AS1Q96NR2 134 aa4.23□□□□□ -1.73
SMG9-202ENST00000594081 ORMDL1Q9P0S3 153 aa4.23□□□□□ -1.73
SMG9-202ENST00000594081 SS18L2Q9UHA2 77 aa4.23□□□□□ -1.73
SMG9-202ENST00000594081 TRBV7-7A0A0K0K1E9 115 aa4.22□□□□□ -1.73
SMG9-202ENST00000594081 LYRM7Q5U5X0 104 aa4.22□□□□□ -1.73
SMG9-202ENST00000594081 Q96NJ1 140 aa4.22□□□□□ -1.73
SMG9-202ENST00000594081 H3BUT2 72 aa4.21□□□□□ -1.74
SMG9-202ENST00000594081 TRACP01848 142 aa4.21□□□□□ -1.74
SMG9-202ENST00000594081 FABP2P12104 132 aa4.21□□□□□ -1.74
SMG9-202ENST00000594081 NDUFV3P56181 108 aaKnown RBP4.21□□□□□ -1.74
SMG9-202ENST00000594081 LCE5AQ5TCM9 118 aa4.21□□□□□ -1.74
SMG9-202ENST00000594081 TMEM256-PLSCR3K7ERE1 68 aa4.2□□□□□ -1.74
SMG9-202ENST00000594081 LST1O00453 97 aa4.2□□□□□ -1.74
SMG9-202ENST00000594081 TEN1Q86WV5 123 aa4.2□□□□□ -1.74
SMG9-202ENST00000594081 H3BMG7 143 aa4.19□□□□□ -1.74
SMG9-202ENST00000594081 SCGB1C2P0DMR2 95 aa4.19□□□□□ -1.74
SMG9-202ENST00000594081 LOC105371267A0A1B0GV96 52 aa4.18□□□□□ -1.74
SMG9-202ENST00000594081 A8MUU9 505 aa4.18□□□□□ -1.74
SMG9-202ENST00000594081 UBE2V1Q13404 147 aa4.18□□□□□ -1.74
SMG9-202ENST00000594081 ATXN8Q156A1 80 aa4.17□□□□□ -1.74
SMG9-202ENST00000594081 KRTAP20-1Q3LI63 56 aa4.16□□□□□ -1.74
SMG9-202ENST00000594081 ANKRD29Q8N6D5 301 aa4.16□□□□□ -1.74
SMG9-202ENST00000594081 RBM12B-AS1Q9P1G2 102 aa4.16□□□□□ -1.74
SMG9-202ENST00000594081 MUC12Q9UKN1 5478 aa4.16□□□□□ -1.74
SMG9-202ENST00000594081 A0A087WSZ3 146 aa4.15□□□□□ -1.75
SMG9-202ENST00000594081 BATFQ16520 125 aa4.15□□□□□ -1.75
SMG9-202ENST00000594081 MPLKIPQ8TAP9 179 aa4.15□□□□□ -1.75
SMG9-202ENST00000594081 TRBV7-4A0A0J9YYF1 115 aa4.14□□□□□ -1.75
SMG9-202ENST00000594081 A0A1B0GV72 72 aa4.14□□□□□ -1.75
SMG9-202ENST00000594081 HRES1P13985 223 aa4.14□□□□□ -1.75
SMG9-202ENST00000594081 C21orf62-AS1Q17RA5 79 aa4.14□□□□□ -1.75
SMG9-202ENST00000594081 KRTAP16-1A8MUX0 517 aa4.13□□□□□ -1.75
SMG9-202ENST00000594081 CCKP06307 115 aa4.13□□□□□ -1.75
SMG9-202ENST00000594081 DSCR8Q96T75 97 aa4.13□□□□□ -1.75
SMG9-202ENST00000594081 JMJD7-PLA2G4BH0Y9G9 81 aa4.12□□□□□ -1.75
SMG9-202ENST00000594081 RBM3P98179 157 aaKnown RBP4.12□□□□□ -1.75
SMG9-202ENST00000594081 SIGMAR1Q99720 223 aa4.12□□□□□ -1.75
SMG9-202ENST00000594081 A0A1W2PNM2 257 aa4.11□□□□□ -1.75
SMG9-202ENST00000594081 BAALC-AS2P0C853 105 aa4.11□□□□□ -1.75
SMG9-202ENST00000594081 NAA38Q9BRA0 125 aaKnown RBP4.11□□□□□ -1.75
SMG9-202ENST00000594081 C9JAW5 83 aa4.1□□□□□ -1.75
SMG9-202ENST00000594081 DSCR10P59022 87 aa4.1□□□□□ -1.75
SMG9-202ENST00000594081 Q8N9P0 234 aaPredicted RBP4.1□□□□□ -1.75
SMG9-202ENST00000594081 C9orf118A6NHY6 69 aa4.09□□□□□ -1.75
SMG9-202ENST00000594081 PDE6GP18545 87 aa4.09□□□□□ -1.75
SMG9-202ENST00000594081 VPS25Q9BRG1 176 aa4.09□□□□□ -1.75
SMG9-202ENST00000594081 A0A1B0GW54 56 aa4.08□□□□□ -1.76
SMG9-202ENST00000594081 A0A1W2PPM0 123 aa4.08□□□□□ -1.76
SMG9-202ENST00000594081 LOC110117498A0A087WWA1 95 aa4.07□□□□□ -1.76
SMG9-202ENST00000594081 A8MWP4 228 aa4.07□□□□□ -1.76
SMG9-202ENST00000594081 H3BT86 120 aa4.07□□□□□ -1.76
SMG9-202ENST00000594081 TAX1BP3O14907 124 aa4.07□□□□□ -1.76
SMG9-202ENST00000594081 IGKV4-1P06312 121 aa4.07□□□□□ -1.76
SMG9-202ENST00000594081 NOTCH2NLQ7Z3S9 236 aa4.07□□□□□ -1.76
SMG9-202ENST00000594081 J3KT08 172 aa4.06□□□□□ -1.76
SMG9-202ENST00000594081 COL5A1-AS1Q5SY13 56 aa4.06□□□□□ -1.76
SMG9-202ENST00000594081 Q6ZQT0 140 aa4.06□□□□□ -1.76
SMG9-202ENST00000594081 MTURNQ8N3F0 131 aa4.05□□□□□ -1.76
SMG9-202ENST00000594081 C8orf87E5RJ46 101 aa4.04□□□□□ -1.76
SMG9-202ENST00000594081 LINC00472Q9H8W2 130 aa4.04□□□□□ -1.76
SMG9-202ENST00000594081 C14orf132Q9NPU4 83 aa4.04□□□□□ -1.76
SMG9-202ENST00000594081 SPCS1Q9Y6A9 102 aa4.04□□□□□ -1.76
SMG9-202ENST00000594081 LINC00313P59037 77 aa4.03□□□□□ -1.76
SMG9-202ENST00000594081 A0A1B0GVX0 72 aa4.02□□□□□ -1.77
SMG9-202ENST00000594081 IGHV6-1A0A0B4J1U7 121 aa4.01□□□□□ -1.77
SMG9-202ENST00000594081 NDUFB1O75438 58 aa4.01□□□□□ -1.77
SMG9-202ENST00000594081 DEFB116Q30KQ4 102 aa4□□□□□ -1.77
SMG9-202ENST00000594081 MDN1Q9NU22 5596 aa3.99□□□□□ -1.77
SMG9-202ENST00000594081 K7EP34 96 aa3.99□□□□□ -1.77
SMG9-202ENST00000594081 A6NN06 94 aa3.98□□□□□ -1.77
SMG9-202ENST00000594081 KRTAP5-9P26371 169 aa3.98□□□□□ -1.77
SMG9-202ENST00000594081 GTF2H5Q6ZYL4 71 aa3.98□□□□□ -1.77
SMG9-202ENST00000594081 KMT2DO14686 5537 aa3.97□□□□□ -1.77
SMG9-202ENST00000594081 PCP4L1A6NKN8 68 aa3.97□□□□□ -1.77
SMG9-202ENST00000594081 NREPQ16612 68 aa3.97□□□□□ -1.77
SMG9-202ENST00000594081 SVIPQ8NHG7 77 aa3.97□□□□□ -1.77
SMG9-202ENST00000594081 SPINK7P58062 85 aa3.96□□□□□ -1.78
SMG9-202ENST00000594081 KRTAP2-3P0C7H8 128 aa3.94□□□□□ -1.78
SMG9-202ENST00000594081 WFDC13Q8IUB5 93 aa3.94□□□□□ -1.78
SMG9-202ENST00000594081 KRTAP2-4Q9BYR9 128 aa3.94□□□□□ -1.78
SMG9-202ENST00000594081 C8orf17Q9NRJ1 99 aa3.94□□□□□ -1.78
SMG9-202ENST00000594081 PRO0461Q9UI25 63 aa3.94□□□□□ -1.78
SMG9-202ENST00000594081 IGKV3D-7A0A0C4DH55 119 aa3.93□□□□□ -1.78
SMG9-202ENST00000594081 PRR15Q8IV56 129 aa3.93□□□□□ -1.78
SMG9-202ENST00000594081 ZCCHC13Q8WW36 166 aaKnown RBP3.93□□□□□ -1.78
SMG9-202ENST00000594081 BPY2O14599 106 aa3.92□□□□□ -1.78
SMG9-202ENST00000594081 UBL5Q9BZL1 73 aa3.92□□□□□ -1.78
SMG9-202ENST00000594081 F8W1H4 67 aa3.91□□□□□ -1.78
SMG9-202ENST00000594081 Q6ZVQ6 151 aa3.91□□□□□ -1.78
SMG9-202ENST00000594081 TMEM254Q8TBM7 123 aa3.91□□□□□ -1.78
SMG9-202ENST00000594081 MMP24-AS1A0A0U1RRL7 71 aa3.9□□□□□ -1.79
SMG9-202ENST00000594081 K7EQZ3 153 aa3.9□□□□□ -1.79
SMG9-202ENST00000594081 hDV103S1A0JD37 113 aa3.89□□□□□ -1.79
SMG9-202ENST00000594081 MT1BP07438 61 aa3.89□□□□□ -1.79
SMG9-202ENST00000594081 MRPL34Q9BQ48 92 aaKnown RBP3.89□□□□□ -1.79
SMG9-202ENST00000594081 KRTAP10-5P60370 271 aa3.87□□□□□ -1.79
SMG9-202ENST00000594081 ETDBQ3ZM63 59 aa3.87□□□□□ -1.79
SMG9-202ENST00000594081 NDUFS5O43920 106 aa3.86□□□□□ -1.79
SMG9-202ENST00000594081 Q5VV11 94 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms