RNA–Protein interactions for RNA: ENST00000593504.5

SYMPK-202, Transcript of symplekin, humanhuman

TSL 2

Gene SYMPK, Length 5,107 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-202ENST00000593504 TENM4Q6N022 2769 aa9.06□□□□□ -0.96
SYMPK-202ENST00000593504 HRES1P13985 223 aa9.04□□□□□ -0.96
SYMPK-202ENST00000593504 PRAC1Q96KF2 57 aa9.03□□□□□ -0.96
SYMPK-202ENST00000593504 PDZD2O15018 2839 aa9□□□□□ -0.97
SYMPK-202ENST00000593504 Q5W150 140 aa8.97□□□□□ -0.97
SYMPK-202ENST00000593504 COX6B2Q6YFQ2 88 aa8.96□□□□□ -0.97
SYMPK-202ENST00000593504 ZCCHC13Q8WW36 166 aaKnown RBP8.96□□□□□ -0.97
SYMPK-202ENST00000593504 KRTAP29-1A8MX34 341 aaPredicted RBP8.96□□□□□ -0.98
SYMPK-202ENST00000593504 CSMD1Q96PZ7 3565 aa8.95□□□□□ -0.98
SYMPK-202ENST00000593504 A0A087X002 238 aa8.95□□□□□ -0.98
SYMPK-202ENST00000593504 SPINK7P58062 85 aa8.94□□□□□ -0.98
SYMPK-202ENST00000593504 ASB16-AS1Q495Z4 193 aa8.94□□□□□ -0.98
SYMPK-202ENST00000593504 KRTAP13-1Q8IUC0 172 aa8.93□□□□□ -0.98
SYMPK-202ENST00000593504 CSAG1Q6PB30 78 aa8.92□□□□□ -0.98
SYMPK-202ENST00000593504 CELSR1Q9NYQ6 3014 aa8.9□□□□□ -0.99
SYMPK-202ENST00000593504 A0A1B0GU33 70 aa8.89□□□□□ -0.99
SYMPK-202ENST00000593504 Q5VSD8 79 aa8.88□□□□□ -0.99
SYMPK-202ENST00000593504 LUZP6Q538Z0 58 aa8.88□□□□□ -0.99
SYMPK-202ENST00000593504 DMAC1Q96GE9 116 aa8.87□□□□□ -0.99
SYMPK-202ENST00000593504 NOTCH2NLQ7Z3S9 236 aa8.84□□□□□ -0.99
SYMPK-202ENST00000593504 SPENQ96T58 3664 aaKnown RBP8.83□□□□□ -1
SYMPK-202ENST00000593504 A0A0D9SG42 100 aa8.83□□□□□ -1
SYMPK-202ENST00000593504 TENM1Q9UKZ4 2725 aa8.83□□□□□ -1
SYMPK-202ENST00000593504 BSNQ9UPA5 3926 aa8.82□□□□□ -1
SYMPK-202ENST00000593504 Q6ZSA8 131 aa8.81□□□□□ -1
SYMPK-202ENST00000593504 TENM3Q9P273 2699 aa8.81□□□□□ -1
SYMPK-202ENST00000593504 KRTAP21-3Q3LHN1 58 aa8.81□□□□□ -1
SYMPK-202ENST00000593504 SVEP1Q4LDE5 3571 aa8.8□□□□□ -1
SYMPK-202ENST00000593504 NBPF19A0A087WUL8 3843 aa8.79□□□□□ -1
SYMPK-202ENST00000593504 OTOGQ6ZRI0 2925 aa8.78□□□□□ -1
SYMPK-202ENST00000593504 KRTAP13-2Q52LG2 175 aa8.77□□□□□ -1.01
SYMPK-202ENST00000593504 A6NN06 94 aa8.75□□□□□ -1.01
SYMPK-202ENST00000593504 A0A0A0MQY5 61 aa8.7□□□□□ -1.02
SYMPK-202ENST00000593504 VWFP04275 2813 aa8.68□□□□□ -1.02
SYMPK-202ENST00000593504 RPS29P62273 56 aaKnown RBP8.65□□□□□ -1.02
SYMPK-202ENST00000593504 ANK3Q12955 4377 aaKnown RBP8.63□□□□□ -1.03
SYMPK-202ENST00000593504 SPATA8Q6RVD6 105 aa8.63□□□□□ -1.03
SYMPK-202ENST00000593504 S4R3F8 94 aa8.62□□□□□ -1.03
SYMPK-202ENST00000593504 ROMO1P60602 79 aa8.61□□□□□ -1.03
SYMPK-202ENST00000593504 CSMD2Q7Z408 3487 aa8.58□□□□□ -1.04
SYMPK-202ENST00000593504 DMBT1Q9UGM3 2413 aaPredicted RBP8.57□□□□□ -1.04
SYMPK-202ENST00000593504 FBN1P35555 2871 aaKnown RBP8.55□□□□□ -1.04
SYMPK-202ENST00000593504 RPL37P61927 97 aaKnown RBP8.54□□□□□ -1.04
SYMPK-202ENST00000593504 FLG2Q5D862 2391 aaPredicted RBP8.53□□□□□ -1.04
SYMPK-202ENST00000593504 SEC61BP60468 96 aaKnown RBP8.52□□□□□ -1.05
SYMPK-202ENST00000593504 H1FX-AS1Q4G0G2 97 aa8.51□□□□□ -1.05
SYMPK-202ENST00000593504 KRTAP16-1A8MUX0 517 aa8.5□□□□□ -1.05
SYMPK-202ENST00000593504 KRTAP1-4P0C5Y4 121 aa8.49□□□□□ -1.05
SYMPK-202ENST00000593504 ZFHX3Q15911 3703 aa8.49□□□□□ -1.05
SYMPK-202ENST00000593504 KRTAP25-1Q3LHN0 102 aa8.48□□□□□ -1.05
SYMPK-202ENST00000593504 TENM2Q9NT68 2774 aa8.45□□□□□ -1.06
SYMPK-202ENST00000593504 M0R2T5 61 aa8.43□□□□□ -1.06
SYMPK-202ENST00000593504 A8MU10 97 aa8.42□□□□□ -1.06
SYMPK-202ENST00000593504 CAMK2N1Q7Z7J9 78 aa8.42□□□□□ -1.06
SYMPK-202ENST00000593504 CUBNO60494 3623 aa8.4□□□□□ -1.07
SYMPK-202ENST00000593504 ADM2Q7Z4H4 148 aa8.39□□□□□ -1.07
SYMPK-202ENST00000593504 TGP01266 2768 aa8.35□□□□□ -1.07
SYMPK-202ENST00000593504 TRRAPQ9Y4A5 3859 aa8.34□□□□□ -1.07
SYMPK-202ENST00000593504 A8MUU9 505 aa8.34□□□□□ -1.07
SYMPK-202ENST00000593504 PKD1L1Q8TDX9 2849 aa8.33□□□□□ -1.08
SYMPK-202ENST00000593504 C20orf166-AS1Q96NR2 134 aa8.32□□□□□ -1.08
SYMPK-202ENST00000593504 R4GN34 69 aa8.32□□□□□ -1.08
SYMPK-202ENST00000593504 VPS13CQ709C8 3753 aa8.25□□□□□ -1.09
SYMPK-202ENST00000593504 M0QZ58 72 aa8.22□□□□□ -1.09
SYMPK-202ENST00000593504 NDUFAF8A1L188 74 aa8.21□□□□□ -1.09
SYMPK-202ENST00000593504 A0A1B0GVY2 172 aa8.17□□□□□ -1.1
SYMPK-202ENST00000593504 XP32Q5T750 250 aa8.13□□□□□ -1.11
SYMPK-202ENST00000593504 ZNF469Q96JG9 3925 aaPredicted RBP8.1□□□□□ -1.11
SYMPK-202ENST00000593504 KRTAP13-3Q3SY46 172 aa8.03□□□□□ -1.12
SYMPK-202ENST00000593504 AKAP9Q99996 3911 aa8□□□□□ -1.13
SYMPK-202ENST00000593504 HUWE1Q7Z6Z7 4374 aaKnown RBP7.99□□□□□ -1.13
SYMPK-202ENST00000593504 KRTAP10-8P60410 259 aa7.98□□□□□ -1.13
SYMPK-202ENST00000593504 TPRXLQ17RH7 258 aa7.96□□□□□ -1.14
SYMPK-202ENST00000593504 FBN3Q75N90 2809 aa7.95□□□□□ -1.14
SYMPK-202ENST00000593504 PLAC4Q8WY50 150 aa7.95□□□□□ -1.14
SYMPK-202ENST00000593504 MEGF8Q7Z7M0 2845 aa7.94□□□□□ -1.14
SYMPK-202ENST00000593504 SRRM2Q9UQ35 2752 aaKnown RBP7.82□□□□□ -1.16
SYMPK-202ENST00000593504 H0YAA0 97 aa7.81□□□□□ -1.16
SYMPK-202ENST00000593504 PP632Q6XCG6 107 aa7.7□□□□□ -1.18
SYMPK-202ENST00000593504 DNAH9Q9NYC9 4486 aa7.7□□□□□ -1.18
SYMPK-202ENST00000593504 C10orf95Q9H7T3 257 aa7.7□□□□□ -1.18
SYMPK-202ENST00000593504 P0C880 135 aa7.69□□□□□ -1.18
SYMPK-202ENST00000593504 COL7A1Q02388 2944 aa7.68□□□□□ -1.18
SYMPK-202ENST00000593504 KRTAP3-1Q9BYR8 98 aa7.62□□□□□ -1.19
SYMPK-202ENST00000593504 TNP1P09430 55 aa7.62□□□□□ -1.19
SYMPK-202ENST00000593504 KRTAP10-4P60372 401 aaPredicted RBP7.56□□□□□ -1.2
SYMPK-202ENST00000593504 ALMS1Q8TCU4 4167 aa7.53□□□□□ -1.2
SYMPK-202ENST00000593504 CSMD3Q7Z407 3707 aa7.52□□□□□ -1.21
SYMPK-202ENST00000593504 PLECQ15149 4684 aaKnown RBP7.5□□□□□ -1.21
SYMPK-202ENST00000593504 MT1HL1P0DM35 61 aa7.49□□□□□ -1.21
SYMPK-202ENST00000593504 DNAH1Q9P2D7 4330 aa7.45□□□□□ -1.22
SYMPK-202ENST00000593504 KRTAP10-10P60014 251 aa7.4□□□□□ -1.22
SYMPK-202ENST00000593504 VPS13DQ5THJ4 4388 aa7.37□□□□□ -1.23
SYMPK-202ENST00000593504 DNAH10Q8IVF4 4471 aa7.37□□□□□ -1.23
SYMPK-202ENST00000593504 KRTAP12-2P59991 146 aa7.35□□□□□ -1.23
SYMPK-202ENST00000593504 DNAH5Q8TE73 4624 aa7.31□□□□□ -1.24
SYMPK-202ENST00000593504 KRTAP4-5Q9BYR2 181 aa7.31□□□□□ -1.24
SYMPK-202ENST00000593504 DNHD1Q96M86 4753 aa7.3□□□□□ -1.24
SYMPK-202ENST00000593504 KRTAP10-6P60371 365 aaPredicted RBP7.29□□□□□ -1.24
SYMPK-202ENST00000593504 STARD9Q9P2P6 4700 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms