RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 DSCR10P59022 87 aa5.28□□□□□ -1.56
DDX39A-220ENST00000593008 NDUFB1O75438 58 aa5.27□□□□□ -1.57
DDX39A-220ENST00000593008 NREPQ16612 68 aa5.27□□□□□ -1.57
DDX39A-220ENST00000593008 Q8N9L7 120 aa5.27□□□□□ -1.57
DDX39A-220ENST00000593008 IGHV6-1A0A0B4J1U7 121 aa5.25□□□□□ -1.57
DDX39A-220ENST00000593008 IGKV3D-7A0A0C4DH55 119 aa5.25□□□□□ -1.57
DDX39A-220ENST00000593008 XP32Q5T750 250 aa5.25□□□□□ -1.57
DDX39A-220ENST00000593008 K7EQZ3 153 aa5.24□□□□□ -1.57
DDX39A-220ENST00000593008 BPY2O14599 106 aa5.24□□□□□ -1.57
DDX39A-220ENST00000593008 SEC61BP60468 96 aaKnown RBP5.24□□□□□ -1.57
DDX39A-220ENST00000593008 A0A1B0GVX0 72 aa5.23□□□□□ -1.57
DDX39A-220ENST00000593008 KRTAP16-1A8MUX0 517 aa5.21□□□□□ -1.58
DDX39A-220ENST00000593008 A8MWP4 228 aa5.21□□□□□ -1.58
DDX39A-220ENST00000593008 UBL5Q9BZL1 73 aa5.21□□□□□ -1.58
DDX39A-220ENST00000593008 FAM240AA0A1B0GVK7 77 aa5.2□□□□□ -1.58
DDX39A-220ENST00000593008 LINC00313P59037 77 aa5.2□□□□□ -1.58
DDX39A-220ENST00000593008 C8orf87E5RJ46 101 aa5.19□□□□□ -1.58
DDX39A-220ENST00000593008 ACYP1P07311 99 aa5.19□□□□□ -1.58
DDX39A-220ENST00000593008 MMP24-AS1A0A0U1RRL7 71 aa5.18□□□□□ -1.58
DDX39A-220ENST00000593008 PRR15Q8IV56 129 aa5.18□□□□□ -1.58
DDX39A-220ENST00000593008 KRTAP4-1Q9BYQ7 146 aa5.18□□□□□ -1.58
DDX39A-220ENST00000593008 C8orf17Q9NRJ1 99 aa5.18□□□□□ -1.58
DDX39A-220ENST00000593008 J3QR89 54 aa5.17□□□□□ -1.58
DDX39A-220ENST00000593008 ATP11AUNQ6ZP68 121 aa5.17□□□□□ -1.58
DDX39A-220ENST00000593008 FAT4Q6V0I7 4981 aa5.16□□□□□ -1.58
DDX39A-220ENST00000593008 KRTAP9-2Q9BYQ4 174 aa5.16□□□□□ -1.58
DDX39A-220ENST00000593008 RPL37P61927 97 aaKnown RBP5.15□□□□□ -1.59
DDX39A-220ENST00000593008 WFDC13Q8IUB5 93 aa5.15□□□□□ -1.59
DDX39A-220ENST00000593008 PCOTHQ58A44 107 aa5.14□□□□□ -1.59
DDX39A-220ENST00000593008 A8MUU9 505 aa5.13□□□□□ -1.59
DDX39A-220ENST00000593008 C20orf166-AS1Q96NR2 134 aa5.13□□□□□ -1.59
DDX39A-220ENST00000593008 A0A087WVE0 104 aa5.12□□□□□ -1.59
DDX39A-220ENST00000593008 CXCL6P80162 114 aa5.12□□□□□ -1.59
DDX39A-220ENST00000593008 K7ERU9 68 aa5.11□□□□□ -1.59
DDX39A-220ENST00000593008 LCE2AQ5TA79 106 aaPredicted RBP5.11□□□□□ -1.59
DDX39A-220ENST00000593008 Q75L30 129 aa5.11□□□□□ -1.59
DDX39A-220ENST00000593008 LINC00643Q86TS7 51 aa5.11□□□□□ -1.59
DDX39A-220ENST00000593008 hDV103S1A0JD37 113 aa5.09□□□□□ -1.59
DDX39A-220ENST00000593008 HCG22E2RYF7 251 aa5.09□□□□□ -1.59
DDX39A-220ENST00000593008 MT-ATP8P03928 68 aa5.09□□□□□ -1.59
DDX39A-220ENST00000593008 HIST1H4AP62805 103 aaKnown RBP5.09□□□□□ -1.59
DDX39A-220ENST00000593008 ATP5EP2Q5VTU8 51 aa5.09□□□□□ -1.59
DDX39A-220ENST00000593008 CASC2Q6XLA1 102 aa5.09□□□□□ -1.59
DDX39A-220ENST00000593008 TMEM254Q8TBM7 123 aa5.09□□□□□ -1.59
DDX39A-220ENST00000593008 MRPL34Q9BQ48 92 aaKnown RBP5.08□□□□□ -1.6
DDX39A-220ENST00000593008 Q8N9P0 234 aaPredicted RBP5.07□□□□□ -1.6
DDX39A-220ENST00000593008 KRTAP9-6A0A140TA67 174 aa5.06□□□□□ -1.6
DDX39A-220ENST00000593008 NDUFS5O43920 106 aa5.05□□□□□ -1.6
DDX39A-220ENST00000593008 Q5W150 140 aa5.04□□□□□ -1.6
DDX39A-220ENST00000593008 ZCCHC13Q8WW36 166 aaKnown RBP5.03□□□□□ -1.6
DDX39A-220ENST00000593008 LCE2CQ5TA81 110 aa5.02□□□□□ -1.61
DDX39A-220ENST00000593008 KRTAP19-2Q3LHN2 52 aa5.01□□□□□ -1.61
DDX39A-220ENST00000593008 TP53AIP1Q9HCN2 124 aa4.99□□□□□ -1.61
DDX39A-220ENST00000593008 MT1HP80294 61 aa4.96□□□□□ -1.62
DDX39A-220ENST00000593008 FLGP20930 4061 aaPredicted RBP4.95□□□□□ -1.62
DDX39A-220ENST00000593008 RBM12B-AS1Q9P1G2 102 aa4.95□□□□□ -1.62
DDX39A-220ENST00000593008 IGKV2D-30A0A075B6S6 120 aa4.94□□□□□ -1.62
DDX39A-220ENST00000593008 FAM236AA0A1B0GUQ0 79 aa4.94□□□□□ -1.62
DDX39A-220ENST00000593008 FAM236BA0A1B0GV22 79 aa4.94□□□□□ -1.62
DDX39A-220ENST00000593008 IGKV2-30P06310 120 aa4.94□□□□□ -1.62
DDX39A-220ENST00000593008 HRES1P13985 223 aa4.94□□□□□ -1.62
DDX39A-220ENST00000593008 COX6B2Q6YFQ2 88 aa4.94□□□□□ -1.62
DDX39A-220ENST00000593008 SPINK7P58062 85 aa4.93□□□□□ -1.62
DDX39A-220ENST00000593008 OCR1Q9BZK8 76 aa4.93□□□□□ -1.62
DDX39A-220ENST00000593008 LCE2DQ5TA82 110 aaPredicted RBP4.92□□□□□ -1.62
DDX39A-220ENST00000593008 IMUPQ9GZP8 106 aa4.91□□□□□ -1.62
DDX39A-220ENST00000593008 M0R2T5 61 aa4.89□□□□□ -1.63
DDX39A-220ENST00000593008 TRAV22A0A0B4J277 110 aa4.88□□□□□ -1.63
DDX39A-220ENST00000593008 H0Y9P7 68 aa4.88□□□□□ -1.63
DDX39A-220ENST00000593008 SCGB1A1P11684 91 aa4.88□□□□□ -1.63
DDX39A-220ENST00000593008 MPLKIPQ8TAP9 179 aa4.88□□□□□ -1.63
DDX39A-220ENST00000593008 FAM236DA0A1B0GTK5 79 aa4.87□□□□□ -1.63
DDX39A-220ENST00000593008 UQCRQO14949 82 aa4.87□□□□□ -1.63
DDX39A-220ENST00000593008 FAM236CP0DP71 79 aa4.87□□□□□ -1.63
DDX39A-220ENST00000593008 ATOX1O00244 68 aa4.86□□□□□ -1.63
DDX39A-220ENST00000593008 C7orf65Q6ZTY9 151 aa4.86□□□□□ -1.63
DDX39A-220ENST00000593008 CRCT1Q9UGL9 99 aa4.86□□□□□ -1.63
DDX39A-220ENST00000593008 KRTAP10-6P60371 365 aaPredicted RBP4.84□□□□□ -1.63
DDX39A-220ENST00000593008 FSIP2Q5CZC0 6907 aa4.83□□□□□ -1.64
DDX39A-220ENST00000593008 LORP23490 312 aaPredicted RBP4.83□□□□□ -1.64
DDX39A-220ENST00000593008 SMIM20Q8N5G0 67 aa4.83□□□□□ -1.64
DDX39A-220ENST00000593008 MP68P56378 58 aa4.82□□□□□ -1.64
DDX39A-220ENST00000593008 C4orf26Q17RF5 130 aa4.82□□□□□ -1.64
DDX39A-220ENST00000593008 LINC00208Q96KT6 92 aa4.82□□□□□ -1.64
DDX39A-220ENST00000593008 CYP4F30PQ9H0H9 118 aa4.82□□□□□ -1.64
DDX39A-220ENST00000593008 KLKP1Q107X0 134 aa4.81□□□□□ -1.64
DDX39A-220ENST00000593008 C5orf47Q569G3 176 aa4.81□□□□□ -1.64
DDX39A-220ENST00000593008 C1orf64Q8NEQ6 169 aa4.81□□□□□ -1.64
DDX39A-220ENST00000593008 TRAV7A0A075B6U4 112 aa4.8□□□□□ -1.64
DDX39A-220ENST00000593008 LOC101927531A0A1B0GV80 90 aa4.8□□□□□ -1.64
DDX39A-220ENST00000593008 H3BPC8 53 aa4.79□□□□□ -1.64
DDX39A-220ENST00000593008 KRTAP3-1Q9BYR8 98 aa4.79□□□□□ -1.64
DDX39A-220ENST00000593008 SNURFQ9Y675 71 aa4.77□□□□□ -1.65
DDX39A-220ENST00000593008 SERP2Q8N6R1 65 aa4.75□□□□□ -1.65
DDX39A-220ENST00000593008 C20orf197Q8N268 126 aa4.73□□□□□ -1.65
DDX39A-220ENST00000593008 H1FX-AS1Q4G0G2 97 aa4.72□□□□□ -1.65
DDX39A-220ENST00000593008 CYSTM1Q9H1C7 97 aa4.72□□□□□ -1.65
DDX39A-220ENST00000593008 COX7CP15954 63 aa4.69□□□□□ -1.66
DDX39A-220ENST00000593008 ANAPC13Q9BS18 74 aa4.69□□□□□ -1.66
DDX39A-220ENST00000593008 KRTAP9-8Q9BYQ0 159 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 149.9 ms