RNA–Protein interactions for RNA: ENST00000592208.5

RAVER1-204, Transcript of ribonucleoprotein, PTB binding 1, humanhuman

TSL 1 (best)

Gene RAVER1, Length 4,693 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAVER1-204ENST00000592208 KRTAP4-16G5E9R7 235 aaPredicted RBP8.75□□□□□ -1.01
RAVER1-204ENST00000592208 PANO1I0J062 215 aa8.75□□□□□ -1.01
RAVER1-204ENST00000592208 M0R2T5 61 aa8.74□□□□□ -1.01
RAVER1-204ENST00000592208 LUZP6Q538Z0 58 aa8.74□□□□□ -1.01
RAVER1-204ENST00000592208 FBN2P35556 2912 aa8.72□□□□□ -1.01
RAVER1-204ENST00000592208 HRNRQ86YZ3 2850 aaPredicted RBP8.72□□□□□ -1.01
RAVER1-204ENST00000592208 DMDP11532 3685 aa8.71□□□□□ -1.02
RAVER1-204ENST00000592208 WDFY3Q8IZQ1 3526 aa8.67□□□□□ -1.02
RAVER1-204ENST00000592208 RPS29P62273 56 aaKnown RBP8.66□□□□□ -1.02
RAVER1-204ENST00000592208 ASB16-AS1Q495Z4 193 aa8.65□□□□□ -1.02
RAVER1-204ENST00000592208 TENM3Q9P273 2699 aa8.64□□□□□ -1.03
RAVER1-204ENST00000592208 R4GN34 69 aa8.63□□□□□ -1.03
RAVER1-204ENST00000592208 Q6ZRN7 208 aaPredicted RBP8.61□□□□□ -1.03
RAVER1-204ENST00000592208 KRTAP29-1A8MX34 341 aaPredicted RBP8.6□□□□□ -1.03
RAVER1-204ENST00000592208 ASPMQ8IZT6 3477 aa8.59□□□□□ -1.03
RAVER1-204ENST00000592208 MXRA5Q9NR99 2828 aa8.59□□□□□ -1.04
RAVER1-204ENST00000592208 LAMA5O15230 3695 aa8.58□□□□□ -1.04
RAVER1-204ENST00000592208 DCHS1Q96JQ0 3298 aa8.57□□□□□ -1.04
RAVER1-204ENST00000592208 Q5VV11 94 aa8.57□□□□□ -1.04
RAVER1-204ENST00000592208 RPL37P61927 97 aaKnown RBP8.55□□□□□ -1.04
RAVER1-204ENST00000592208 TENM1Q9UKZ4 2725 aa8.55□□□□□ -1.04
RAVER1-204ENST00000592208 A0A087X002 238 aa8.54□□□□□ -1.04
RAVER1-204ENST00000592208 KRTAP11-1Q8IUC1 163 aa8.49□□□□□ -1.05
RAVER1-204ENST00000592208 RELNP78509 3460 aa8.48□□□□□ -1.05
RAVER1-204ENST00000592208 H1FX-AS1Q4G0G2 97 aa8.46□□□□□ -1.05
RAVER1-204ENST00000592208 PKD1L1Q8TDX9 2849 aa8.46□□□□□ -1.05
RAVER1-204ENST00000592208 KRTAP7-1Q8IUC3 87 aa8.43□□□□□ -1.06
RAVER1-204ENST00000592208 M0QZ58 72 aa8.41□□□□□ -1.06
RAVER1-204ENST00000592208 ROMO1P60602 79 aa8.41□□□□□ -1.06
RAVER1-204ENST00000592208 H3BS24 57 aa8.4□□□□□ -1.07
RAVER1-204ENST00000592208 ZFHX4Q86UP3 3567 aa8.39□□□□□ -1.07
RAVER1-204ENST00000592208 KRTAP13-1Q8IUC0 172 aa8.39□□□□□ -1.07
RAVER1-204ENST00000592208 TENM2Q9NT68 2774 aa8.39□□□□□ -1.07
RAVER1-204ENST00000592208 PRAC1Q96KF2 57 aa8.37□□□□□ -1.07
RAVER1-204ENST00000592208 CELSR1Q9NYQ6 3014 aa8.36□□□□□ -1.07
RAVER1-204ENST00000592208 PLAC4Q8WY50 150 aa8.32□□□□□ -1.08
RAVER1-204ENST00000592208 NOTCH2NLQ7Z3S9 236 aa8.32□□□□□ -1.08
RAVER1-204ENST00000592208 ADM2Q7Z4H4 148 aa8.3□□□□□ -1.08
RAVER1-204ENST00000592208 SPATA8Q6RVD6 105 aa8.29□□□□□ -1.08
RAVER1-204ENST00000592208 KRTAP13-2Q52LG2 175 aa8.29□□□□□ -1.08
RAVER1-204ENST00000592208 A0A0A0MQY5 61 aa8.27□□□□□ -1.09
RAVER1-204ENST00000592208 VWFP04275 2813 aa8.23□□□□□ -1.09
RAVER1-204ENST00000592208 PDZD2O15018 2839 aa8.22□□□□□ -1.09
RAVER1-204ENST00000592208 FBN1P35555 2871 aaKnown RBP8.22□□□□□ -1.09
RAVER1-204ENST00000592208 OTOGQ6ZRI0 2925 aa8.17□□□□□ -1.1
RAVER1-204ENST00000592208 TGP01266 2768 aa8.17□□□□□ -1.1
RAVER1-204ENST00000592208 SMG1Q96Q15 3661 aaKnown RBP8.15□□□□□ -1.1
RAVER1-204ENST00000592208 A8MUU9 505 aa8.14□□□□□ -1.11
RAVER1-204ENST00000592208 C20orf166-AS1Q96NR2 134 aa8.12□□□□□ -1.11
RAVER1-204ENST00000592208 A6NN06 94 aa8.08□□□□□ -1.12
RAVER1-204ENST00000592208 ZFHX3Q15911 3703 aa8.07□□□□□ -1.12
RAVER1-204ENST00000592208 A8MU10 97 aa8.07□□□□□ -1.12
RAVER1-204ENST00000592208 SRRM2Q9UQ35 2752 aaKnown RBP8.03□□□□□ -1.12
RAVER1-204ENST00000592208 NBPF19A0A087WUL8 3843 aa8□□□□□ -1.13
RAVER1-204ENST00000592208 KRTAP1-4P0C5Y4 121 aa7.99□□□□□ -1.13
RAVER1-204ENST00000592208 CSMD1Q96PZ7 3565 aa7.97□□□□□ -1.13
RAVER1-204ENST00000592208 SVEP1Q4LDE5 3571 aa7.95□□□□□ -1.14
RAVER1-204ENST00000592208 KRTAP25-1Q3LHN0 102 aa7.95□□□□□ -1.14
RAVER1-204ENST00000592208 SPENQ96T58 3664 aaKnown RBP7.92□□□□□ -1.14
RAVER1-204ENST00000592208 TNP1P09430 55 aa7.9□□□□□ -1.14
RAVER1-204ENST00000592208 TPRXLQ17RH7 258 aa7.86□□□□□ -1.15
RAVER1-204ENST00000592208 BSNQ9UPA5 3926 aa7.85□□□□□ -1.15
RAVER1-204ENST00000592208 XP32Q5T750 250 aa7.85□□□□□ -1.15
RAVER1-204ENST00000592208 PP632Q6XCG6 107 aa7.81□□□□□ -1.16
RAVER1-204ENST00000592208 CSMD2Q7Z408 3487 aa7.75□□□□□ -1.17
RAVER1-204ENST00000592208 CUBNO60494 3623 aa7.74□□□□□ -1.17
RAVER1-204ENST00000592208 A0A1B0GVY2 172 aa7.74□□□□□ -1.17
RAVER1-204ENST00000592208 KRTAP16-1A8MUX0 517 aa7.69□□□□□ -1.18
RAVER1-204ENST00000592208 KRTAP13-3Q3SY46 172 aa7.65□□□□□ -1.18
RAVER1-204ENST00000592208 FBN3Q75N90 2809 aa7.63□□□□□ -1.19
RAVER1-204ENST00000592208 KRTAP10-8P60410 259 aa7.61□□□□□ -1.19
RAVER1-204ENST00000592208 COL7A1Q02388 2944 aa7.54□□□□□ -1.2
RAVER1-204ENST00000592208 PRO2289Q9P1D8 64 aa7.53□□□□□ -1.2
RAVER1-204ENST00000592208 NDUFAF8A1L188 74 aa7.53□□□□□ -1.2
RAVER1-204ENST00000592208 ANK3Q12955 4377 aaKnown RBP7.53□□□□□ -1.2
RAVER1-204ENST00000592208 TRRAPQ9Y4A5 3859 aa7.51□□□□□ -1.21
RAVER1-204ENST00000592208 H0YAA0 97 aa7.5□□□□□ -1.21
RAVER1-204ENST00000592208 KRTAP10-10P60014 251 aa7.47□□□□□ -1.21
RAVER1-204ENST00000592208 MEGF8Q7Z7M0 2845 aa7.47□□□□□ -1.21
RAVER1-204ENST00000592208 C10orf95Q9H7T3 257 aa7.47□□□□□ -1.21
RAVER1-204ENST00000592208 VPS13CQ709C8 3753 aa7.45□□□□□ -1.22
RAVER1-204ENST00000592208 P0C880 135 aa7.41□□□□□ -1.22
RAVER1-204ENST00000592208 ZNF469Q96JG9 3925 aaPredicted RBP7.28□□□□□ -1.24
RAVER1-204ENST00000592208 KRTAP13-4Q3LI77 160 aa7.1□□□□□ -1.27
RAVER1-204ENST00000592208 MT1HL1P0DM35 61 aa7.1□□□□□ -1.27
RAVER1-204ENST00000592208 KRTAP12-2P59991 146 aa7.02□□□□□ -1.29
RAVER1-204ENST00000592208 KRTAP4-5Q9BYR2 181 aa7.02□□□□□ -1.29
RAVER1-204ENST00000592208 KRTAP12-1P59990 96 aa7.01□□□□□ -1.29
RAVER1-204ENST00000592208 KRTAP3-1Q9BYR8 98 aa7□□□□□ -1.29
RAVER1-204ENST00000592208 HUWE1Q7Z6Z7 4374 aaKnown RBP6.98□□□□□ -1.29
RAVER1-204ENST00000592208 AKAP9Q99996 3911 aa6.97□□□□□ -1.29
RAVER1-204ENST00000592208 KRTAP10-4P60372 401 aaPredicted RBP6.96□□□□□ -1.3
RAVER1-204ENST00000592208 DNHD1Q96M86 4753 aa6.92□□□□□ -1.3
RAVER1-204ENST00000592208 KRTAP10-6P60371 365 aaPredicted RBP6.84□□□□□ -1.31
RAVER1-204ENST00000592208 ALMS1Q8TCU4 4167 aa6.8□□□□□ -1.32
RAVER1-204ENST00000592208 DNAH9Q9NYC9 4486 aa6.76□□□□□ -1.33
RAVER1-204ENST00000592208 DNAH5Q8TE73 4624 aa6.71□□□□□ -1.33
RAVER1-204ENST00000592208 CSMD3Q7Z407 3707 aa6.7□□□□□ -1.34
RAVER1-204ENST00000592208 KRTAP15-1Q3LI76 137 aa6.69□□□□□ -1.34
RAVER1-204ENST00000592208 PLECQ15149 4684 aaKnown RBP6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms