RNA–Protein interactions for RNA: ENST00000590834.5

RUNDC3A-205, Transcript of RUN domain containing 3A, humanhuman

TSL 2

Gene RUNDC3A, Length 2,373 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-205ENST00000590834 ZCCHC13Q8WW36 166 aaKnown RBP13□□□□□ -0.33
RUNDC3A-205ENST00000590834 WFDC13Q8IUB5 93 aa12.99□□□□□ -0.33
RUNDC3A-205ENST00000590834 SPINK6Q6UWN8 80 aa12.98□□□□□ -0.33
RUNDC3A-205ENST00000590834 KRTAP29-1A8MX34 341 aaPredicted RBP12.96□□□□□ -0.33
RUNDC3A-205ENST00000590834 PLA2G1BP04054 148 aaKnown RBP12.96□□□□□ -0.33
RUNDC3A-205ENST00000590834 hDV103S1A0JD37 113 aa12.94□□□□□ -0.34
RUNDC3A-205ENST00000590834 NDUFB1O75438 58 aa12.94□□□□□ -0.34
RUNDC3A-205ENST00000590834 BRK1Q8WUW1 75 aa12.94□□□□□ -0.34
RUNDC3A-205ENST00000590834 KRTAP10-4P60372 401 aaPredicted RBP12.94□□□□□ -0.34
RUNDC3A-205ENST00000590834 CASC2Q6XLA1 102 aa12.92□□□□□ -0.34
RUNDC3A-205ENST00000590834 MMP24-AS1A0A0U1RRL7 71 aa12.91□□□□□ -0.34
RUNDC3A-205ENST00000590834 PRR4Q16378 134 aa12.88□□□□□ -0.35
RUNDC3A-205ENST00000590834 ASB16-AS1Q495Z4 193 aa12.88□□□□□ -0.35
RUNDC3A-205ENST00000590834 CYP4F30PQ9H0H9 118 aa12.88□□□□□ -0.35
RUNDC3A-205ENST00000590834 A0A1B0GVX0 72 aa12.87□□□□□ -0.35
RUNDC3A-205ENST00000590834 C1orf64Q8NEQ6 169 aa12.86□□□□□ -0.35
RUNDC3A-205ENST00000590834 TYMSOSQ8TAI1 123 aa12.85□□□□□ -0.35
RUNDC3A-205ENST00000590834 CDK2AP2O75956 126 aa12.85□□□□□ -0.35
RUNDC3A-205ENST00000590834 IGHV6-1A0A0B4J1U7 121 aa12.84□□□□□ -0.35
RUNDC3A-205ENST00000590834 Q1T7F1 81 aa12.84□□□□□ -0.35
RUNDC3A-205ENST00000590834 C8orf17Q9NRJ1 99 aa12.84□□□□□ -0.35
RUNDC3A-205ENST00000590834 PRR26Q8N8Z3 221 aa12.82□□□□□ -0.36
RUNDC3A-205ENST00000590834 MP68P56378 58 aa12.81□□□□□ -0.36
RUNDC3A-205ENST00000590834 NOTCH2NLQ7Z3S9 236 aa12.79□□□□□ -0.36
RUNDC3A-205ENST00000590834 H3BPC8 53 aa12.77□□□□□ -0.36
RUNDC3A-205ENST00000590834 C1orf195Q5TG92 126 aa12.77□□□□□ -0.36
RUNDC3A-205ENST00000590834 HSPG2P98160 4391 aa12.76□□□□□ -0.37
RUNDC3A-205ENST00000590834 C4orf48Q5BLP8 95 aa12.74□□□□□ -0.37
RUNDC3A-205ENST00000590834 LIMD2Q9BT23 127 aa12.74□□□□□ -0.37
RUNDC3A-205ENST00000590834 TRAV22A0A0B4J277 110 aa12.73□□□□□ -0.37
RUNDC3A-205ENST00000590834 PKHD1L1Q86WI1 4243 aa12.73□□□□□ -0.37
RUNDC3A-205ENST00000590834 SPINK1P00995 79 aa12.72□□□□□ -0.37
RUNDC3A-205ENST00000590834 SPANXA2-OT1Q8N9U9 137 aa12.71□□□□□ -0.38
RUNDC3A-205ENST00000590834 V9GYY9 64 aa12.7□□□□□ -0.38
RUNDC3A-205ENST00000590834 PSPHP1O15172 72 aa12.69□□□□□ -0.38
RUNDC3A-205ENST00000590834 LINC00304Q8N9R0 145 aa12.69□□□□□ -0.38
RUNDC3A-205ENST00000590834 RYR1P21817 5038 aa12.68□□□□□ -0.38
RUNDC3A-205ENST00000590834 MRPL34Q9BQ48 92 aaKnown RBP12.67□□□□□ -0.38
RUNDC3A-205ENST00000590834 LINC00208Q96KT6 92 aa12.67□□□□□ -0.38
RUNDC3A-205ENST00000590834 FAM229AH3BQW9 127 aa12.66□□□□□ -0.38
RUNDC3A-205ENST00000590834 H0Y9P7 68 aa12.64□□□□□ -0.39
RUNDC3A-205ENST00000590834 C8orf87E5RJ46 101 aa12.63□□□□□ -0.39
RUNDC3A-205ENST00000590834 SPAG11AQ6PDA7 123 aa12.63□□□□□ -0.39
RUNDC3A-205ENST00000590834 RPS29P62273 56 aaKnown RBP12.62□□□□□ -0.39
RUNDC3A-205ENST00000590834 TP53AIP1Q9HCN2 124 aa12.61□□□□□ -0.39
RUNDC3A-205ENST00000590834 NDUFS5O43920 106 aa12.6□□□□□ -0.39
RUNDC3A-205ENST00000590834 Q5VSD8 79 aa12.6□□□□□ -0.39
RUNDC3A-205ENST00000590834 LINC00313P59037 77 aa12.58□□□□□ -0.4
RUNDC3A-205ENST00000590834 EPPK1P58107 5090 aaKnown RBP12.56□□□□□ -0.4
RUNDC3A-205ENST00000590834 KRTAP17-1Q9BYP8 105 aa12.55□□□□□ -0.4
RUNDC3A-205ENST00000590834 A8MUN3 132 aa12.55□□□□□ -0.4
RUNDC3A-205ENST00000590834 KIAA1109Q2LD37 5005 aa12.54□□□□□ -0.4
RUNDC3A-205ENST00000590834 A8MU10 97 aa12.54□□□□□ -0.4
RUNDC3A-205ENST00000590834 LRP1Q07954 4544 aaKnown RBP12.52□□□□□ -0.41
RUNDC3A-205ENST00000590834 KRTAP16-1A8MUX0 517 aa12.49□□□□□ -0.41
RUNDC3A-205ENST00000590834 TNXBP22105 4242 aa12.49□□□□□ -0.41
RUNDC3A-205ENST00000590834 Q8N9P0 234 aaPredicted RBP12.47□□□□□ -0.41
RUNDC3A-205ENST00000590834 IGLV7-46A0A075B6I9 117 aa12.45□□□□□ -0.42
RUNDC3A-205ENST00000590834 Q5W150 140 aa12.44□□□□□ -0.42
RUNDC3A-205ENST00000590834 Q5VV11 94 aa12.44□□□□□ -0.42
RUNDC3A-205ENST00000590834 KRTAP13-3Q3SY46 172 aa12.42□□□□□ -0.42
RUNDC3A-205ENST00000590834 FAT3Q8TDW7 4589 aa12.42□□□□□ -0.42
RUNDC3A-205ENST00000590834 KRTAP10-8P60410 259 aa12.4□□□□□ -0.42
RUNDC3A-205ENST00000590834 Q8N1X5 172 aa12.39□□□□□ -0.43
RUNDC3A-205ENST00000590834 PCOTHQ58A44 107 aa12.36□□□□□ -0.43
RUNDC3A-205ENST00000590834 COA5Q86WW8 74 aa12.35□□□□□ -0.43
RUNDC3A-205ENST00000590834 PMAIP1Q13794 54 aa12.34□□□□□ -0.43
RUNDC3A-205ENST00000590834 RETNLBQ9BQ08 111 aa12.34□□□□□ -0.43
RUNDC3A-205ENST00000590834 FLG2Q5D862 2391 aaPredicted RBP12.34□□□□□ -0.43
RUNDC3A-205ENST00000590834 PRR15LQ9BU68 103 aa12.33□□□□□ -0.44
RUNDC3A-205ENST00000590834 LOC101927531A0A1B0GV80 90 aa12.32□□□□□ -0.44
RUNDC3A-205ENST00000590834 CHKB-CPT1BH3BT56 60 aa12.31□□□□□ -0.44
RUNDC3A-205ENST00000590834 Q75L30 129 aa12.29□□□□□ -0.44
RUNDC3A-205ENST00000590834 MYCBP2O75592 4640 aa12.27□□□□□ -0.45
RUNDC3A-205ENST00000590834 C9orf92A6NGG3 77 aa12.24□□□□□ -0.45
RUNDC3A-205ENST00000590834 SEC61GP60059 68 aa12.2□□□□□ -0.46
RUNDC3A-205ENST00000590834 LINC01558Q9Y6Z2 57 aa12.2□□□□□ -0.46
RUNDC3A-205ENST00000590834 LCA10Q71F78 164 aa12.19□□□□□ -0.46
RUNDC3A-205ENST00000590834 MT1HL1P0DM35 61 aa12.19□□□□□ -0.46
RUNDC3A-205ENST00000590834 ATP11AUNQ6ZP68 121 aa12.17□□□□□ -0.46
RUNDC3A-205ENST00000590834 IGKV2-30P06310 120 aa12.16□□□□□ -0.46
RUNDC3A-205ENST00000590834 A6NED7 52 aa12.14□□□□□ -0.47
RUNDC3A-205ENST00000590834 SPTSSBQ8NFR3 76 aa12.14□□□□□ -0.47
RUNDC3A-205ENST00000590834 C20orf166-AS1Q96NR2 134 aa12.14□□□□□ -0.47
RUNDC3A-205ENST00000590834 A8MUU9 505 aa12.13□□□□□ -0.47
RUNDC3A-205ENST00000590834 HRES1P13985 223 aa12.11□□□□□ -0.47
RUNDC3A-205ENST00000590834 CDC42SE1Q9NRR8 79 aa12.11□□□□□ -0.47
RUNDC3A-205ENST00000590834 DMBT1Q9UGM3 2413 aaPredicted RBP12.1□□□□□ -0.47
RUNDC3A-205ENST00000590834 KRTAP4-5Q9BYR2 181 aa12.1□□□□□ -0.47
RUNDC3A-205ENST00000590834 IGKV2D-30A0A075B6S6 120 aa12.06□□□□□ -0.48
RUNDC3A-205ENST00000590834 KTN1-AS1Q86SY8 53 aa12.01□□□□□ -0.49
RUNDC3A-205ENST00000590834 SPINK7P58062 85 aa11.99□□□□□ -0.49
RUNDC3A-205ENST00000590834 A6NN06 94 aa11.96□□□□□ -0.49
RUNDC3A-205ENST00000590834 ACYP2P14621 99 aa11.94□□□□□ -0.5
RUNDC3A-205ENST00000590834 C7orf65Q6ZTY9 151 aa11.94□□□□□ -0.5
RUNDC3A-205ENST00000590834 ABCA13Q86UQ4 5058 aa11.92□□□□□ -0.5
RUNDC3A-205ENST00000590834 BIRC6Q9NR09 4857 aa11.9□□□□□ -0.5
RUNDC3A-205ENST00000590834 DMAC1Q96GE9 116 aa11.9□□□□□ -0.51
RUNDC3A-205ENST00000590834 XP32Q5T750 250 aa11.85□□□□□ -0.51
RUNDC3A-205ENST00000590834 HERC2O95714 4834 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms