RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 LIMD2Q9BT23 127 aa5.85□□□□□ -1.47
SDF2-208ENST00000589788 IGLV8-61A0A075B6I0 122 aa5.84□□□□□ -1.47
SDF2-208ENST00000589788 OBSCN-AS1Q96MR7 158 aa5.84□□□□□ -1.47
SDF2-208ENST00000589788 CD164Q04900 197 aa5.83□□□□□ -1.48
SDF2-208ENST00000589788 TEN1Q86WV5 123 aa5.83□□□□□ -1.48
SDF2-208ENST00000589788 RBM3P98179 157 aaKnown RBP5.82□□□□□ -1.48
SDF2-208ENST00000589788 ETDBQ3ZM63 59 aa5.82□□□□□ -1.48
SDF2-208ENST00000589788 LPAP08519 4548 aa5.81□□□□□ -1.48
SDF2-208ENST00000589788 Q6JHZ5 121 aa5.81□□□□□ -1.48
SDF2-208ENST00000589788 A0A0G2JQZ4 141 aa5.8□□□□□ -1.48
SDF2-208ENST00000589788 TRBV7-4A0A0J9YYF1 115 aa5.8□□□□□ -1.48
SDF2-208ENST00000589788 A0A1B0GV72 72 aa5.8□□□□□ -1.48
SDF2-208ENST00000589788 KRTAP13-3Q3SY46 172 aa5.8□□□□□ -1.48
SDF2-208ENST00000589788 DSCR8Q96T75 97 aa5.8□□□□□ -1.48
SDF2-208ENST00000589788 LOC110117498A0A087WWA1 95 aa5.79□□□□□ -1.48
SDF2-208ENST00000589788 IGFL1Q6UW32 110 aa5.79□□□□□ -1.48
SDF2-208ENST00000589788 C14orf132Q9NPU4 83 aa5.79□□□□□ -1.48
SDF2-208ENST00000589788 PDE6GP18545 87 aa5.78□□□□□ -1.48
SDF2-208ENST00000589788 Q6ZQT0 140 aa5.77□□□□□ -1.49
SDF2-208ENST00000589788 Q5XG85 94 aa5.75□□□□□ -1.49
SDF2-208ENST00000589788 Q6Q795 121 aa5.75□□□□□ -1.49
SDF2-208ENST00000589788 RNF213Q63HN8 5207 aa5.75□□□□□ -1.49
SDF2-208ENST00000589788 A0A1W2PNM2 257 aa5.74□□□□□ -1.49
SDF2-208ENST00000589788 CCKP06307 115 aa5.74□□□□□ -1.49
SDF2-208ENST00000589788 A0A0U1RQV1 116 aa5.73□□□□□ -1.49
SDF2-208ENST00000589788 A0A1B0GW54 56 aa5.73□□□□□ -1.49
SDF2-208ENST00000589788 C1orf195Q5TG92 126 aa5.73□□□□□ -1.49
SDF2-208ENST00000589788 VPS25Q9BRG1 176 aa5.73□□□□□ -1.49
SDF2-208ENST00000589788 TRBV7-7A0A0K0K1E9 115 aa5.72□□□□□ -1.49
SDF2-208ENST00000589788 C9orf92A6NGG3 77 aa5.71□□□□□ -1.5
SDF2-208ENST00000589788 ASB16-AS1Q495Z4 193 aa5.71□□□□□ -1.5
SDF2-208ENST00000589788 FAM240AA0A1B0GVK7 77 aa5.69□□□□□ -1.5
SDF2-208ENST00000589788 J3QR89 54 aa5.69□□□□□ -1.5
SDF2-208ENST00000589788 A0A087WSZ3 146 aa5.68□□□□□ -1.5
SDF2-208ENST00000589788 SS18L2Q9UHA2 77 aa5.68□□□□□ -1.5
SDF2-208ENST00000589788 IGKV2D-30A0A075B6S6 120 aa5.67□□□□□ -1.5
SDF2-208ENST00000589788 ACYP1P07311 99 aa5.67□□□□□ -1.5
SDF2-208ENST00000589788 K7ERU9 68 aa5.65□□□□□ -1.51
SDF2-208ENST00000589788 LINC00846Q9NV44 126 aa5.64□□□□□ -1.51
SDF2-208ENST00000589788 UBL5Q9BZL1 73 aa5.62□□□□□ -1.51
SDF2-208ENST00000589788 NREPQ16612 68 aa5.61□□□□□ -1.51
SDF2-208ENST00000589788 Q6ZVQ6 151 aa5.61□□□□□ -1.51
SDF2-208ENST00000589788 PCOTHQ58A44 107 aa5.6□□□□□ -1.51
SDF2-208ENST00000589788 Q96NJ1 140 aa5.6□□□□□ -1.51
SDF2-208ENST00000589788 LINC00472Q9H8W2 130 aa5.6□□□□□ -1.51
SDF2-208ENST00000589788 MUC2Q02817 5179 aa5.59□□□□□ -1.51
SDF2-208ENST00000589788 KRTAP4-1Q9BYQ7 146 aa5.59□□□□□ -1.51
SDF2-208ENST00000589788 LCE1AQ5T7P2 110 aa5.58□□□□□ -1.52
SDF2-208ENST00000589788 J3KT08 172 aa5.57□□□□□ -1.52
SDF2-208ENST00000589788 RPL37P61927 97 aaKnown RBP5.57□□□□□ -1.52
SDF2-208ENST00000589788 BPY2O14599 106 aa5.55□□□□□ -1.52
SDF2-208ENST00000589788 IGKV4-1P06312 121 aa5.55□□□□□ -1.52
SDF2-208ENST00000589788 DEFB116Q30KQ4 102 aa5.55□□□□□ -1.52
SDF2-208ENST00000589788 ATP5EP2Q5VTU8 51 aa5.55□□□□□ -1.52
SDF2-208ENST00000589788 LINC00643Q86TS7 51 aa5.55□□□□□ -1.52
SDF2-208ENST00000589788 SIGMAR1Q99720 223 aa5.55□□□□□ -1.52
SDF2-208ENST00000589788 MUC17Q685J3 4493 aa5.55□□□□□ -1.52
SDF2-208ENST00000589788 CXCL6P80162 114 aa5.54□□□□□ -1.52
SDF2-208ENST00000589788 DSCR10P59022 87 aa5.52□□□□□ -1.53
SDF2-208ENST00000589788 A8MWP4 228 aa5.51□□□□□ -1.53
SDF2-208ENST00000589788 ATP11AUNQ6ZP68 121 aa5.51□□□□□ -1.53
SDF2-208ENST00000589788 IGKV3D-7A0A0C4DH55 119 aa5.49□□□□□ -1.53
SDF2-208ENST00000589788 NDUFB1O75438 58 aa5.49□□□□□ -1.53
SDF2-208ENST00000589788 A0A1B0GVX0 72 aa5.48□□□□□ -1.53
SDF2-208ENST00000589788 K7EQZ3 153 aa5.48□□□□□ -1.53
SDF2-208ENST00000589788 PRR15Q8IV56 129 aa5.48□□□□□ -1.53
SDF2-208ENST00000589788 LINC00313P59037 77 aa5.48□□□□□ -1.53
SDF2-208ENST00000589788 IGHV6-1A0A0B4J1U7 121 aa5.47□□□□□ -1.53
SDF2-208ENST00000589788 Q8N9L7 120 aa5.47□□□□□ -1.53
SDF2-208ENST00000589788 C20orf166-AS1Q96NR2 134 aa5.47□□□□□ -1.53
SDF2-208ENST00000589788 A8MUU9 505 aa5.46□□□□□ -1.54
SDF2-208ENST00000589788 C8orf87E5RJ46 101 aa5.46□□□□□ -1.54
SDF2-208ENST00000589788 MT-ATP8P03928 68 aa5.45□□□□□ -1.54
SDF2-208ENST00000589788 PRAC1Q96KF2 57 aa5.45□□□□□ -1.54
SDF2-208ENST00000589788 HIST1H4AP62805 103 aaKnown RBP5.44□□□□□ -1.54
SDF2-208ENST00000589788 IMUPQ9GZP8 106 aa5.44□□□□□ -1.54
SDF2-208ENST00000589788 C8orf17Q9NRJ1 99 aa5.44□□□□□ -1.54
SDF2-208ENST00000589788 MMP24-AS1A0A0U1RRL7 71 aa5.43□□□□□ -1.54
SDF2-208ENST00000589788 FAT4Q6V0I7 4981 aa5.43□□□□□ -1.54
SDF2-208ENST00000589788 KRTAP19-2Q3LHN2 52 aa5.42□□□□□ -1.54
SDF2-208ENST00000589788 COX6B2Q6YFQ2 88 aa5.42□□□□□ -1.54
SDF2-208ENST00000589788 NOTCH2NLQ7Z3S9 236 aa5.42□□□□□ -1.54
SDF2-208ENST00000589788 KRTAP16-1A8MUX0 517 aa5.41□□□□□ -1.54
SDF2-208ENST00000589788 HCG22E2RYF7 251 aa5.41□□□□□ -1.54
SDF2-208ENST00000589788 A0A087WVE0 104 aa5.4□□□□□ -1.55
SDF2-208ENST00000589788 hDV103S1A0JD37 113 aa5.39□□□□□ -1.55
SDF2-208ENST00000589788 CASC2Q6XLA1 102 aa5.39□□□□□ -1.55
SDF2-208ENST00000589788 TMEM254Q8TBM7 123 aa5.39□□□□□ -1.55
SDF2-208ENST00000589788 WFDC13Q8IUB5 93 aa5.38□□□□□ -1.55
SDF2-208ENST00000589788 MRPL34Q9BQ48 92 aaKnown RBP5.37□□□□□ -1.55
SDF2-208ENST00000589788 MT1HP80294 61 aa5.36□□□□□ -1.55
SDF2-208ENST00000589788 M0R2T5 61 aa5.33□□□□□ -1.56
SDF2-208ENST00000589788 FAM236AA0A1B0GUQ0 79 aa5.32□□□□□ -1.56
SDF2-208ENST00000589788 FAM236BA0A1B0GV22 79 aa5.32□□□□□ -1.56
SDF2-208ENST00000589788 NDUFS5O43920 106 aa5.3□□□□□ -1.56
SDF2-208ENST00000589788 ZCCHC13Q8WW36 166 aaKnown RBP5.3□□□□□ -1.56
SDF2-208ENST00000589788 SCGB1A1P11684 91 aa5.28□□□□□ -1.56
SDF2-208ENST00000589788 TP53AIP1Q9HCN2 124 aa5.28□□□□□ -1.56
SDF2-208ENST00000589788 FAM236DA0A1B0GTK5 79 aa5.27□□□□□ -1.57
SDF2-208ENST00000589788 FAM236CP0DP71 79 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 140.2 ms