RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 SPINK1P00995 79 aa3.34□□□□□ -1.87
VPS25-204ENST00000589577 CCKP06307 115 aa3.34□□□□□ -1.87
VPS25-204ENST00000589577 CD164Q04900 197 aa3.34□□□□□ -1.87
VPS25-204ENST00000589577 SMIM29Q86T20 159 aa3.34□□□□□ -1.87
VPS25-204ENST00000589577 TEN1Q86WV5 123 aa3.34□□□□□ -1.87
VPS25-204ENST00000589577 A0A1B0GW54 56 aa3.33□□□□□ -1.88
VPS25-204ENST00000589577 J3QR89 54 aa3.33□□□□□ -1.88
VPS25-204ENST00000589577 IGFL1Q6UW32 110 aa3.33□□□□□ -1.88
VPS25-204ENST00000589577 HRCT1Q6UXD1 115 aa3.33□□□□□ -1.88
VPS25-204ENST00000589577 KRTAP9-8Q9BYQ0 159 aa3.33□□□□□ -1.88
VPS25-204ENST00000589577 C14orf132Q9NPU4 83 aa3.33□□□□□ -1.88
VPS25-204ENST00000589577 LOC110117498A0A087WWA1 95 aa3.32□□□□□ -1.88
VPS25-204ENST00000589577 TRBV7-4A0A0J9YYF1 115 aa3.32□□□□□ -1.88
VPS25-204ENST00000589577 RPS29P62273 56 aaKnown RBP3.32□□□□□ -1.88
VPS25-204ENST00000589577 ETDBQ3ZM63 59 aa3.32□□□□□ -1.88
VPS25-204ENST00000589577 TRBV7-7A0A0K0K1E9 115 aa3.31□□□□□ -1.88
VPS25-204ENST00000589577 PCOTHQ58A44 107 aa3.31□□□□□ -1.88
VPS25-204ENST00000589577 LCE3BQ5TA77 95 aa3.31□□□□□ -1.88
VPS25-204ENST00000589577 Q6Q795 121 aa3.31□□□□□ -1.88
VPS25-204ENST00000589577 PRO0461Q9UI25 63 aa3.31□□□□□ -1.88
VPS25-204ENST00000589577 A0A087WSZ3 146 aa3.3□□□□□ -1.88
VPS25-204ENST00000589577 KRTAP20-1Q3LI63 56 aa3.3□□□□□ -1.88
VPS25-204ENST00000589577 Q6ZQT0 140 aa3.3□□□□□ -1.88
VPS25-204ENST00000589577 KRTAP4-12Q9BQ66 201 aa3.3□□□□□ -1.88
VPS25-204ENST00000589577 MUC12Q9UKN1 5478 aa3.29□□□□□ -1.88
VPS25-204ENST00000589577 OBSCN-AS1Q96MR7 158 aa3.29□□□□□ -1.88
VPS25-204ENST00000589577 UBL5Q9BZL1 73 aa3.29□□□□□ -1.88
VPS25-204ENST00000589577 ACYP1P07311 99 aa3.28□□□□□ -1.88
VPS25-204ENST00000589577 NREPQ16612 68 aa3.28□□□□□ -1.88
VPS25-204ENST00000589577 Q5XG85 94 aa3.28□□□□□ -1.88
VPS25-204ENST00000589577 A0A0G2JQZ4 141 aa3.27□□□□□ -1.89
VPS25-204ENST00000589577 A0A1W2PNM2 257 aa3.27□□□□□ -1.89
VPS25-204ENST00000589577 SIGMAR1Q99720 223 aa3.27□□□□□ -1.89
VPS25-204ENST00000589577 FAM240AA0A1B0GVK7 77 aa3.26□□□□□ -1.89
VPS25-204ENST00000589577 J3KT08 172 aa3.26□□□□□ -1.89
VPS25-204ENST00000589577 K7ERU9 68 aa3.26□□□□□ -1.89
VPS25-204ENST00000589577 NDUFB1O75438 58 aa3.26□□□□□ -1.89
VPS25-204ENST00000589577 COX6B2Q6YFQ2 88 aa3.26□□□□□ -1.89
VPS25-204ENST00000589577 KRTAP19-6Q3LI70 58 aa3.25□□□□□ -1.89
VPS25-204ENST00000589577 IGKV4-1P06312 121 aa3.24□□□□□ -1.89
VPS25-204ENST00000589577 BPY2O14599 106 aa3.23□□□□□ -1.89
VPS25-204ENST00000589577 MT2AP02795 61 aa3.23□□□□□ -1.89
VPS25-204ENST00000589577 KRTAP9-3Q9BYQ3 159 aa3.23□□□□□ -1.89
VPS25-204ENST00000589577 C1orf195Q5TG92 126 aa3.22□□□□□ -1.89
VPS25-204ENST00000589577 ATP5EP2Q5VTU8 51 aa3.22□□□□□ -1.89
VPS25-204ENST00000589577 Q6ZVQ6 151 aa3.22□□□□□ -1.89
VPS25-204ENST00000589577 MT1FP04733 61 aa3.21□□□□□ -1.9
VPS25-204ENST00000589577 LINC00846Q9NV44 126 aa3.21□□□□□ -1.9
VPS25-204ENST00000589577 C8orf87E5RJ46 101 aa3.2□□□□□ -1.9
VPS25-204ENST00000589577 DEFB116Q30KQ4 102 aa3.2□□□□□ -1.9
VPS25-204ENST00000589577 LINC00643Q86TS7 51 aa3.2□□□□□ -1.9
VPS25-204ENST00000589577 LINC00472Q9H8W2 130 aa3.2□□□□□ -1.9
VPS25-204ENST00000589577 IGHV6-1A0A0B4J1U7 121 aa3.19□□□□□ -1.9
VPS25-204ENST00000589577 A8MWP4 228 aa3.19□□□□□ -1.9
VPS25-204ENST00000589577 CXCL6P80162 114 aa3.19□□□□□ -1.9
VPS25-204ENST00000589577 KRTAP9-9Q9BYP9 154 aa3.19□□□□□ -1.9
VPS25-204ENST00000589577 KRTAP9-4Q9BYQ2 154 aa3.19□□□□□ -1.9
VPS25-204ENST00000589577 A0A1B0GVX0 72 aa3.18□□□□□ -1.9
VPS25-204ENST00000589577 C9orf92A6NGG3 77 aa3.18□□□□□ -1.9
VPS25-204ENST00000589577 LINC00313P59037 77 aa3.18□□□□□ -1.9
VPS25-204ENST00000589577 HIST1H4AP62805 103 aaKnown RBP3.17□□□□□ -1.9
VPS25-204ENST00000589577 PRR15Q8IV56 129 aa3.17□□□□□ -1.9
VPS25-204ENST00000589577 Q96NJ1 140 aa3.17□□□□□ -1.9
VPS25-204ENST00000589577 KMT2DO14686 5537 aa3.17□□□□□ -1.9
VPS25-204ENST00000589577 KRTAP4-8A0A0G2JLE6 195 aa3.16□□□□□ -1.9
VPS25-204ENST00000589577 IGKV3D-7A0A0C4DH55 119 aa3.15□□□□□ -1.91
VPS25-204ENST00000589577 K7EQZ3 153 aa3.15□□□□□ -1.91
VPS25-204ENST00000589577 C8orf17Q9NRJ1 99 aa3.15□□□□□ -1.91
VPS25-204ENST00000589577 MDN1Q9NU22 5596 aa3.14□□□□□ -1.91
VPS25-204ENST00000589577 hDV103S1A0JD37 113 aa3.14□□□□□ -1.91
VPS25-204ENST00000589577 HCG22E2RYF7 251 aa3.14□□□□□ -1.91
VPS25-204ENST00000589577 NDUFS5O43920 106 aa3.14□□□□□ -1.91
VPS25-204ENST00000589577 DSCR10P59022 87 aa3.14□□□□□ -1.91
VPS25-204ENST00000589577 RPL37P61927 97 aaKnown RBP3.13□□□□□ -1.91
VPS25-204ENST00000589577 CASC2Q6XLA1 102 aa3.13□□□□□ -1.91
VPS25-204ENST00000589577 WFDC13Q8IUB5 93 aa3.13□□□□□ -1.91
VPS25-204ENST00000589577 Q8N9L7 120 aa3.13□□□□□ -1.91
VPS25-204ENST00000589577 SVIPQ8NHG7 77 aa3.13□□□□□ -1.91
VPS25-204ENST00000589577 TMEM254Q8TBM7 123 aa3.13□□□□□ -1.91
VPS25-204ENST00000589577 SCGB1A1P11684 91 aa3.12□□□□□ -1.91
VPS25-204ENST00000589577 KRTAP10-10P60014 251 aa3.12□□□□□ -1.91
VPS25-204ENST00000589577 ATP11AUNQ6ZP68 121 aa3.12□□□□□ -1.91
VPS25-204ENST00000589577 MRPL34Q9BQ48 92 aaKnown RBP3.12□□□□□ -1.91
VPS25-204ENST00000589577 IMUPQ9GZP8 106 aa3.12□□□□□ -1.91
VPS25-204ENST00000589577 MMP24-AS1A0A0U1RRL7 71 aa3.1□□□□□ -1.91
VPS25-204ENST00000589577 Q75L30 129 aa3.1□□□□□ -1.91
VPS25-204ENST00000589577 KRTAP2-3P0C7H8 128 aa3.09□□□□□ -1.91
VPS25-204ENST00000589577 C20orf166-AS1Q96NR2 134 aa3.09□□□□□ -1.91
VPS25-204ENST00000589577 KRTAP2-4Q9BYR9 128 aa3.09□□□□□ -1.91
VPS25-204ENST00000589577 TP53AIP1Q9HCN2 124 aa3.09□□□□□ -1.91
VPS25-204ENST00000589577 GPR98Q8WXG9 6306 aa3.09□□□□□ -1.92
VPS25-204ENST00000589577 A8MUU9 505 aa3.08□□□□□ -1.92
VPS25-204ENST00000589577 MT-ATP8P03928 68 aa3.08□□□□□ -1.92
VPS25-204ENST00000589577 LCE1DQ5T752 114 aa3.08□□□□□ -1.92
VPS25-204ENST00000589577 A0A087WVE0 104 aa3.07□□□□□ -1.92
VPS25-204ENST00000589577 NOTCH2NLQ7Z3S9 236 aa3.07□□□□□ -1.92
VPS25-204ENST00000589577 SMIM20Q8N5G0 67 aa3.07□□□□□ -1.92
VPS25-204ENST00000589577 Q8N9P0 234 aaPredicted RBP3.07□□□□□ -1.92
VPS25-204ENST00000589577 KRTAP5-9P26371 169 aa3.06□□□□□ -1.92
VPS25-204ENST00000589577 ZCCHC13Q8WW36 166 aaKnown RBP3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 567 ms