RNA–Protein interactions for RNA: ENST00000589445.1

R3HDM4-205, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 705 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-205ENST00000589445 MUC17Q685J3 4493 aa12.21□□□□□ -0.46
R3HDM4-205ENST00000589445 FAT4Q6V0I7 4981 aa12.2□□□□□ -0.46
R3HDM4-205ENST00000589445 IGHV6-1A0A0B4J1U7 121 aa12.19□□□□□ -0.46
R3HDM4-205ENST00000589445 SEC61BP60468 96 aaKnown RBP12.17□□□□□ -0.46
R3HDM4-205ENST00000589445 MUC2Q02817 5179 aa12.16□□□□□ -0.46
R3HDM4-205ENST00000589445 A0A1B0GVX0 72 aa12.15□□□□□ -0.46
R3HDM4-205ENST00000589445 NDUFB1O75438 58 aa12.12□□□□□ -0.47
R3HDM4-205ENST00000589445 LINC00313P59037 77 aa12.12□□□□□ -0.47
R3HDM4-205ENST00000589445 RPL37P61927 97 aaKnown RBP12.12□□□□□ -0.47
R3HDM4-205ENST00000589445 Q6ZVQ6 151 aa12.12□□□□□ -0.47
R3HDM4-205ENST00000589445 A8MWP4 228 aa12.1□□□□□ -0.47
R3HDM4-205ENST00000589445 LINC00846Q9NV44 126 aa12.1□□□□□ -0.47
R3HDM4-205ENST00000589445 C8orf87E5RJ46 101 aa12.08□□□□□ -0.48
R3HDM4-205ENST00000589445 PCOTHQ58A44 107 aa12.08□□□□□ -0.48
R3HDM4-205ENST00000589445 NOTCH2NLQ7Z3S9 236 aa12.08□□□□□ -0.48
R3HDM4-205ENST00000589445 UBL5Q9BZL1 73 aa12.08□□□□□ -0.48
R3HDM4-205ENST00000589445 BPY2O14599 106 aa12.07□□□□□ -0.48
R3HDM4-205ENST00000589445 IGKV3D-7A0A0C4DH55 119 aa12.05□□□□□ -0.48
R3HDM4-205ENST00000589445 Q75L30 129 aa12.04□□□□□ -0.48
R3HDM4-205ENST00000589445 LCE2AQ5TA79 106 aaPredicted RBP12.03□□□□□ -0.48
R3HDM4-205ENST00000589445 KRTAP16-1A8MUX0 517 aa12.01□□□□□ -0.49
R3HDM4-205ENST00000589445 K7EQZ3 153 aa12□□□□□ -0.49
R3HDM4-205ENST00000589445 C20orf166-AS1Q96NR2 134 aa12□□□□□ -0.49
R3HDM4-205ENST00000589445 PRR15Q8IV56 129 aa11.99□□□□□ -0.49
R3HDM4-205ENST00000589445 C8orf17Q9NRJ1 99 aa11.99□□□□□ -0.49
R3HDM4-205ENST00000589445 A8MUU9 505 aa11.98□□□□□ -0.49
R3HDM4-205ENST00000589445 ATP11AUNQ6ZP68 121 aa11.97□□□□□ -0.49
R3HDM4-205ENST00000589445 Q8N9L7 120 aa11.96□□□□□ -0.49
R3HDM4-205ENST00000589445 ACYP1P07311 99 aa11.92□□□□□ -0.5
R3HDM4-205ENST00000589445 KRTAP4-1Q9BYQ7 146 aa11.92□□□□□ -0.5
R3HDM4-205ENST00000589445 MMP24-AS1A0A0U1RRL7 71 aa11.91□□□□□ -0.5
R3HDM4-205ENST00000589445 FAM240AA0A1B0GVK7 77 aa11.91□□□□□ -0.5
R3HDM4-205ENST00000589445 hDV103S1A0JD37 113 aa11.84□□□□□ -0.51
R3HDM4-205ENST00000589445 WFDC13Q8IUB5 93 aa11.84□□□□□ -0.51
R3HDM4-205ENST00000589445 TMEM254Q8TBM7 123 aa11.84□□□□□ -0.51
R3HDM4-205ENST00000589445 CXCL6P80162 114 aa11.82□□□□□ -0.52
R3HDM4-205ENST00000589445 MRPL34Q9BQ48 92 aaKnown RBP11.82□□□□□ -0.52
R3HDM4-205ENST00000589445 CASC2Q6XLA1 102 aa11.8□□□□□ -0.52
R3HDM4-205ENST00000589445 Q8N9P0 234 aaPredicted RBP11.8□□□□□ -0.52
R3HDM4-205ENST00000589445 NDUFS5O43920 106 aa11.79□□□□□ -0.52
R3HDM4-205ENST00000589445 J3QR89 54 aa11.78□□□□□ -0.52
R3HDM4-205ENST00000589445 HCG22E2RYF7 251 aa11.75□□□□□ -0.53
R3HDM4-205ENST00000589445 ATP5EP2Q5VTU8 51 aa11.75□□□□□ -0.53
R3HDM4-205ENST00000589445 ZCCHC13Q8WW36 166 aaKnown RBP11.75□□□□□ -0.53
R3HDM4-205ENST00000589445 CRCT1Q9UGL9 99 aa11.73□□□□□ -0.53
R3HDM4-205ENST00000589445 FSIP2Q5CZC0 6907 aa11.71□□□□□ -0.53
R3HDM4-205ENST00000589445 LINC00643Q86TS7 51 aa11.68□□□□□ -0.54
R3HDM4-205ENST00000589445 HIST1H4AP62805 103 aaKnown RBP11.66□□□□□ -0.54
R3HDM4-205ENST00000589445 LCE2DQ5TA82 110 aaPredicted RBP11.66□□□□□ -0.54
R3HDM4-205ENST00000589445 COX6B2Q6YFQ2 88 aa11.59□□□□□ -0.55
R3HDM4-205ENST00000589445 K7ERU9 68 aa11.57□□□□□ -0.56
R3HDM4-205ENST00000589445 A0A087WVE0 104 aa11.53□□□□□ -0.56
R3HDM4-205ENST00000589445 SPINK7P58062 85 aa11.52□□□□□ -0.57
R3HDM4-205ENST00000589445 KRTAP19-2Q3LHN2 52 aa11.52□□□□□ -0.57
R3HDM4-205ENST00000589445 Q5W150 140 aa11.5□□□□□ -0.57
R3HDM4-205ENST00000589445 HRES1P13985 223 aa11.47□□□□□ -0.57
R3HDM4-205ENST00000589445 LCE2CQ5TA81 110 aa11.47□□□□□ -0.57
R3HDM4-205ENST00000589445 IGKV2D-30A0A075B6S6 120 aa11.46□□□□□ -0.57
R3HDM4-205ENST00000589445 IGKV2-30P06310 120 aa11.46□□□□□ -0.57
R3HDM4-205ENST00000589445 FAM236DA0A1B0GTK5 79 aa11.45□□□□□ -0.58
R3HDM4-205ENST00000589445 FAM236CP0DP71 79 aa11.45□□□□□ -0.58
R3HDM4-205ENST00000589445 TP53AIP1Q9HCN2 124 aa11.45□□□□□ -0.58
R3HDM4-205ENST00000589445 RBM12B-AS1Q9P1G2 102 aa11.44□□□□□ -0.58
R3HDM4-205ENST00000589445 C7orf65Q6ZTY9 151 aa11.42□□□□□ -0.58
R3HDM4-205ENST00000589445 MT1HP80294 61 aa11.35□□□□□ -0.59
R3HDM4-205ENST00000589445 MPLKIPQ8TAP9 179 aa11.35□□□□□ -0.59
R3HDM4-205ENST00000589445 MT-ATP8P03928 68 aa11.34□□□□□ -0.59
R3HDM4-205ENST00000589445 TRAV22A0A0B4J277 110 aa11.32□□□□□ -0.6
R3HDM4-205ENST00000589445 FLGP20930 4061 aaPredicted RBP11.29□□□□□ -0.6
R3HDM4-205ENST00000589445 M0R2T5 61 aa11.28□□□□□ -0.6
R3HDM4-205ENST00000589445 UQCRQO14949 82 aa11.28□□□□□ -0.6
R3HDM4-205ENST00000589445 H0Y9P7 68 aa11.24□□□□□ -0.61
R3HDM4-205ENST00000589445 IMUPQ9GZP8 106 aa11.24□□□□□ -0.61
R3HDM4-205ENST00000589445 SCGB1A1P11684 91 aa11.23□□□□□ -0.61
R3HDM4-205ENST00000589445 OCR1Q9BZK8 76 aa11.19□□□□□ -0.62
R3HDM4-205ENST00000589445 LOC101927531A0A1B0GV80 90 aa11.18□□□□□ -0.62
R3HDM4-205ENST00000589445 ATOX1O00244 68 aa11.18□□□□□ -0.62
R3HDM4-205ENST00000589445 C4orf26Q17RF5 130 aa11.17□□□□□ -0.62
R3HDM4-205ENST00000589445 FAM236AA0A1B0GUQ0 79 aa11.16□□□□□ -0.62
R3HDM4-205ENST00000589445 FAM236BA0A1B0GV22 79 aa11.16□□□□□ -0.62
R3HDM4-205ENST00000589445 CYP4F30PQ9H0H9 118 aa11.13□□□□□ -0.63
R3HDM4-205ENST00000589445 MP68P56378 58 aa11.12□□□□□ -0.63
R3HDM4-205ENST00000589445 KRTAP9-7A8MTY7 169 aa11.09□□□□□ -0.63
R3HDM4-205ENST00000589445 C1orf64Q8NEQ6 169 aa11.09□□□□□ -0.63
R3HDM4-205ENST00000589445 LINC00208Q96KT6 92 aa11.09□□□□□ -0.63
R3HDM4-205ENST00000589445 KRTAP10-6P60371 365 aaPredicted RBP11.05□□□□□ -0.64
R3HDM4-205ENST00000589445 H1FX-AS1Q4G0G2 97 aa11.05□□□□□ -0.64
R3HDM4-205ENST00000589445 C5orf47Q569G3 176 aa11.04□□□□□ -0.64
R3HDM4-205ENST00000589445 SMIM20Q8N5G0 67 aa10.99□□□□□ -0.65
R3HDM4-205ENST00000589445 LORP23490 312 aaPredicted RBP10.98□□□□□ -0.65
R3HDM4-205ENST00000589445 TRAV7A0A075B6U4 112 aa10.97□□□□□ -0.65
R3HDM4-205ENST00000589445 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.97□□□□□ -0.65
R3HDM4-205ENST00000589445 H3BPC8 53 aa10.95□□□□□ -0.66
R3HDM4-205ENST00000589445 KLKP1Q107X0 134 aa10.93□□□□□ -0.66
R3HDM4-205ENST00000589445 KRTAP3-1Q9BYR8 98 aa10.92□□□□□ -0.66
R3HDM4-205ENST00000589445 S4R3F8 94 aa10.87□□□□□ -0.67
R3HDM4-205ENST00000589445 SERP2Q8N6R1 65 aa10.79□□□□□ -0.68
R3HDM4-205ENST00000589445 LCA10Q71F78 164 aa10.76□□□□□ -0.69
R3HDM4-205ENST00000589445 KRTAP9-8Q9BYQ0 159 aa10.76□□□□□ -0.69
R3HDM4-205ENST00000589445 SNURFQ9Y675 71 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms