RNA–Protein interactions for RNA: ENST00000589293.5

LINC01539-202, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 4

Gene LINC01539, Length 580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-202ENST00000589293 TEN1Q86WV5 123 aa2.84□□□□□ -1.95
LINC01539-202ENST00000589293 C20orf166-AS1Q96NR2 134 aa2.84□□□□□ -1.95
LINC01539-202ENST00000589293 A8MUU9 505 aa2.83□□□□□ -1.96
LINC01539-202ENST00000589293 KRTAP10-10P60014 251 aa2.83□□□□□ -1.96
LINC01539-202ENST00000589293 A0A087WSZ3 146 aa2.82□□□□□ -1.96
LINC01539-202ENST00000589293 LINC00313P59037 77 aa2.82□□□□□ -1.96
LINC01539-202ENST00000589293 HIST1H4GQ99525 98 aa2.82□□□□□ -1.96
LINC01539-202ENST00000589293 FABP2P12104 132 aa2.81□□□□□ -1.96
LINC01539-202ENST00000589293 RAB37Q96AX2 223 aa2.81□□□□□ -1.96
LINC01539-202ENST00000589293 KRTAP9-6A8MVA2 160 aa2.8□□□□□ -1.96
LINC01539-202ENST00000589293 H0YGX0 51 aa2.8□□□□□ -1.96
LINC01539-202ENST00000589293 H3BMG7 143 aa2.8□□□□□ -1.96
LINC01539-202ENST00000589293 IGKV4-1P06312 121 aa2.8□□□□□ -1.96
LINC01539-202ENST00000589293 S100A2P29034 98 aa2.8□□□□□ -1.96
LINC01539-202ENST00000589293 MT2AP02795 61 aa2.79□□□□□ -1.96
LINC01539-202ENST00000589293 USH2AO75445 5202 aa2.78□□□□□ -1.96
LINC01539-202ENST00000589293 DNAL4O96015 105 aa2.78□□□□□ -1.96
LINC01539-202ENST00000589293 COA6Q5JTJ3 125 aaKnown RBP2.78□□□□□ -1.96
LINC01539-202ENST00000589293 ANKRD29Q8N6D5 301 aa2.78□□□□□ -1.96
LINC01539-202ENST00000589293 SSPOA2VEC9 5147 aa2.77□□□□□ -1.97
LINC01539-202ENST00000589293 IGHV6-1A0A0B4J1U7 121 aa2.77□□□□□ -1.97
LINC01539-202ENST00000589293 LCE3EQ5T5B0 92 aa2.77□□□□□ -1.97
LINC01539-202ENST00000589293 LYRM7Q5U5X0 104 aa2.77□□□□□ -1.97
LINC01539-202ENST00000589293 A0A1B0GX51 115 aa2.76□□□□□ -1.97
LINC01539-202ENST00000589293 H3BQ85 93 aa2.76□□□□□ -1.97
LINC01539-202ENST00000589293 TRACP01848 142 aa2.76□□□□□ -1.97
LINC01539-202ENST00000589293 MT1FP04733 61 aa2.76□□□□□ -1.97
LINC01539-202ENST00000589293 TRBV7-4A0A0J9YYF1 115 aa2.75□□□□□ -1.97
LINC01539-202ENST00000589293 A0A1B0GV72 72 aa2.75□□□□□ -1.97
LINC01539-202ENST00000589293 A8MWP4 228 aa2.75□□□□□ -1.97
LINC01539-202ENST00000589293 C8orf87E5RJ46 101 aa2.75□□□□□ -1.97
LINC01539-202ENST00000589293 S100A6P06703 90 aa2.75□□□□□ -1.97
LINC01539-202ENST00000589293 HRES1P13985 223 aa2.75□□□□□ -1.97
LINC01539-202ENST00000589293 FCGBPQ9Y6R7 5405 aaPredicted RBP2.75□□□□□ -1.97
LINC01539-202ENST00000589293 CCKP06307 115 aa2.74□□□□□ -1.97
LINC01539-202ENST00000589293 DEFB116Q30KQ4 102 aa2.74□□□□□ -1.97
LINC01539-202ENST00000589293 VPS25Q9BRG1 176 aa2.74□□□□□ -1.97
LINC01539-202ENST00000589293 ORMDL1Q9P0S3 153 aa2.74□□□□□ -1.97
LINC01539-202ENST00000589293 A0A0B4J2C4 111 aa2.73□□□□□ -1.97
LINC01539-202ENST00000589293 A0A1W2PNM2 257 aa2.73□□□□□ -1.97
LINC01539-202ENST00000589293 TMEM256-PLSCR3K7ERE1 68 aa2.73□□□□□ -1.97
LINC01539-202ENST00000589293 NDUFB1O75438 58 aa2.73□□□□□ -1.97
LINC01539-202ENST00000589293 COX6CP09669 75 aa2.73□□□□□ -1.97
LINC01539-202ENST00000589293 COX8AP10176 69 aa2.73□□□□□ -1.97
LINC01539-202ENST00000589293 PSMB2P49721 201 aa2.73□□□□□ -1.97
LINC01539-202ENST00000589293 A0A1B0GVX0 72 aa2.72□□□□□ -1.97
LINC01539-202ENST00000589293 S100A1P23297 94 aa2.72□□□□□ -1.97
LINC01539-202ENST00000589293 SPINK7P58062 85 aa2.72□□□□□ -1.97
LINC01539-202ENST00000589293 CXCL6P80162 114 aa2.72□□□□□ -1.97
LINC01539-202ENST00000589293 HIST3H2BBQ8N257 126 aa2.72□□□□□ -1.97
LINC01539-202ENST00000589293 ZCCHC13Q8WW36 166 aaKnown RBP2.72□□□□□ -1.97
LINC01539-202ENST00000589293 DSCR8Q96T75 97 aa2.72□□□□□ -1.97
LINC01539-202ENST00000589293 HIST1H2BLQ99880 126 aa2.72□□□□□ -1.97
LINC01539-202ENST00000589293 PRO1854Q9UHT4 67 aa2.72□□□□□ -1.97
LINC01539-202ENST00000589293 J3KT08 172 aa2.71□□□□□ -1.98
LINC01539-202ENST00000589293 DLEU1O43261 78 aa2.71□□□□□ -1.98
LINC01539-202ENST00000589293 WFDC13Q8IUB5 93 aa2.71□□□□□ -1.98
LINC01539-202ENST00000589293 KRTAP19-6Q3LI70 58 aa2.7□□□□□ -1.98
LINC01539-202ENST00000589293 KRTAP5-1Q6L8H4 278 aa2.7□□□□□ -1.98
LINC01539-202ENST00000589293 C14orf144Q96I85 54 aa2.7□□□□□ -1.98
LINC01539-202ENST00000589293 LINC00472Q9H8W2 130 aa2.7□□□□□ -1.98
LINC01539-202ENST00000589293 HIGD1BQ9P298 99 aa2.7□□□□□ -1.98
LINC01539-202ENST00000589293 RBM3P98179 157 aaKnown RBP2.69□□□□□ -1.98
LINC01539-202ENST00000589293 SPATA45Q537H7 98 aa2.69□□□□□ -1.98
LINC01539-202ENST00000589293 CEND1Q8N111 149 aa2.69□□□□□ -1.98
LINC01539-202ENST00000589293 KRTAP6-3Q3LI67 103 aa2.68□□□□□ -1.98
LINC01539-202ENST00000589293 VAMP8Q9BV40 100 aa2.68□□□□□ -1.98
LINC01539-202ENST00000589293 SYNE2Q8WXH0 6885 aaKnown RBP2.68□□□□□ -1.98
LINC01539-202ENST00000589293 C9JAW5 83 aa2.67□□□□□ -1.98
LINC01539-202ENST00000589293 SCGB1C2P0DMR2 95 aa2.67□□□□□ -1.98
LINC01539-202ENST00000589293 MACF1Q9UPN3 7388 aaKnown RBP2.67□□□□□ -1.98
LINC01539-202ENST00000589293 A8MU10 97 aa2.66□□□□□ -1.98
LINC01539-202ENST00000589293 IGKV3D-7A0A0C4DH55 119 aa2.65□□□□□ -1.99
LINC01539-202ENST00000589293 NDUFS5O43920 106 aa2.65□□□□□ -1.99
LINC01539-202ENST00000589293 FXYD2P54710 66 aa2.65□□□□□ -1.99
LINC01539-202ENST00000589293 H1FX-AS1Q4G0G2 97 aa2.65□□□□□ -1.99
LINC01539-202ENST00000589293 FAM236AA0A1B0GUQ0 79 aa2.64□□□□□ -1.99
LINC01539-202ENST00000589293 FAM236BA0A1B0GV22 79 aa2.64□□□□□ -1.99
LINC01539-202ENST00000589293 C2orf91Q6ZV80 131 aa2.64□□□□□ -1.99
LINC01539-202ENST00000589293 C8orf17Q9NRJ1 99 aa2.64□□□□□ -1.99
LINC01539-202ENST00000589293 HSD52Q0P140 79 aa2.63□□□□□ -1.99
LINC01539-202ENST00000589293 Q6ZQT0 140 aa2.63□□□□□ -1.99
LINC01539-202ENST00000589293 A0A1B0GW54 56 aa2.62□□□□□ -1.99
LINC01539-202ENST00000589293 JMJD7-PLA2G4BH0Y9G9 81 aa2.62□□□□□ -1.99
LINC01539-202ENST00000589293 K7ERJ3 54 aa2.62□□□□□ -1.99
LINC01539-202ENST00000589293 BAALC-AS2P0C853 105 aa2.62□□□□□ -1.99
LINC01539-202ENST00000589293 KRTAP5-4Q6L8H1 288 aa2.62□□□□□ -1.99
LINC01539-202ENST00000589293 A6NN06 94 aa2.61□□□□□ -1.99
LINC01539-202ENST00000589293 PDE6GP18545 87 aa2.61□□□□□ -1.99
LINC01539-202ENST00000589293 NREPQ16612 68 aa2.61□□□□□ -1.99
LINC01539-202ENST00000589293 MRPL34Q9BQ48 92 aaKnown RBP2.61□□□□□ -1.99
LINC01539-202ENST00000589293 KRTAP12-2P59991 146 aa2.6□□□□□ -1.99
LINC01539-202ENST00000589293 C7orf65Q6ZTY9 151 aa2.6□□□□□ -1.99
LINC01539-202ENST00000589293 TMEM254Q8TBM7 123 aa2.6□□□□□ -1.99
LINC01539-202ENST00000589293 hDV103S1A0JD37 113 aa2.59□□□□□ -1.99
LINC01539-202ENST00000589293 ATXN8Q156A1 80 aa2.59□□□□□ -1.99
LINC01539-202ENST00000589293 PRR15Q8IV56 129 aa2.59□□□□□ -1.99
LINC01539-202ENST00000589293 KRTAP20-1Q3LI63 56 aa2.58□□□□□ -2
LINC01539-202ENST00000589293 Q5VV11 94 aa2.58□□□□□ -2
LINC01539-202ENST00000589293 KRTAP4-4Q9BYR3 166 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms