RNA–Protein interactions for RNA: ENST00000589285.1

ZNF540-207, Transcript of zinc finger protein 540, humanhuman

Gene ZNF540, Length 3,106 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-207ENST00000589285 C22orf24Q9Y442 160 aa2.02□□□□□ -2.09
ZNF540-207ENST00000589285 C7orf33Q8WU49 177 aa2.02□□□□□ -2.09
ZNF540-207ENST00000589285 LINC00167Q96N53 147 aa2.02□□□□□ -2.09
ZNF540-207ENST00000589285 C1orf137Q5JT78 98 aa2.01□□□□□ -2.09
ZNF540-207ENST00000589285 DNAH5Q8TE73 4624 aa2.01□□□□□ -2.09
ZNF540-207ENST00000589285 MP68P56378 58 aa2.01□□□□□ -2.09
ZNF540-207ENST00000589285 SMIM11BQ8TCY0 68 aa2.01□□□□□ -2.09
ZNF540-207ENST00000589285 DNAH17Q9UFH2 4485 aa2.01□□□□□ -2.09
ZNF540-207ENST00000589285 LRP1BQ9NZR2 4599 aa2□□□□□ -2.09
ZNF540-207ENST00000589285 MYCBP2O75592 4640 aa2□□□□□ -2.09
ZNF540-207ENST00000589285 TRAV13-2A0A0B4J235 113 aa2□□□□□ -2.09
ZNF540-207ENST00000589285 ETDCA0A1B0GVM5 59 aa2□□□□□ -2.09
ZNF540-207ENST00000589285 F8WEM9 126 aa2□□□□□ -2.09
ZNF540-207ENST00000589285 NDUFC1O43677 76 aa2□□□□□ -2.09
ZNF540-207ENST00000589285 COX6CP09669 75 aa2□□□□□ -2.09
ZNF540-207ENST00000589285 UBE2AP49459 152 aa2□□□□□ -2.09
ZNF540-207ENST00000589285 LINC00313P59037 77 aa2□□□□□ -2.09
ZNF540-207ENST00000589285 Q6JHZ5 121 aa2□□□□□ -2.09
ZNF540-207ENST00000589285 ST20-AS1Q8NBB2 130 aa2□□□□□ -2.09
ZNF540-207ENST00000589285 C7orf65Q6ZTY9 151 aa1.99□□□□□ -2.09
ZNF540-207ENST00000589285 SPTSSBQ8NFR3 76 aa1.99□□□□□ -2.09
ZNF540-207ENST00000589285 ZNF706Q9Y5V0 76 aaPredicted RBP1.99□□□□□ -2.09
ZNF540-207ENST00000589285 DYNC1H1Q14204 4646 aaKnown RBP1.99□□□□□ -2.09
ZNF540-207ENST00000589285 TRAV23DV6A0A075B6W5 121 aa1.99□□□□□ -2.09
ZNF540-207ENST00000589285 A0A087WVE0 104 aa1.99□□□□□ -2.09
ZNF540-207ENST00000589285 IGKV3D-7A0A0C4DH55 119 aa1.99□□□□□ -2.09
ZNF540-207ENST00000589285 H0Y9J4 135 aa1.99□□□□□ -2.09
ZNF540-207ENST00000589285 ERC2-IT1O76042 136 aa1.99□□□□□ -2.09
ZNF540-207ENST00000589285 PSORS1C2Q9UIG4 136 aa1.99□□□□□ -2.09
ZNF540-207ENST00000589285 APOBP04114 4563 aaKnown RBP1.99□□□□□ -2.09
ZNF540-207ENST00000589285 CNBPP62633 177 aaKnown RBP1.98□□□□□ -2.09
ZNF540-207ENST00000589285 KLKP1Q107X0 134 aa1.98□□□□□ -2.09
ZNF540-207ENST00000589285 FAM229BQ4G0N7 80 aa1.98□□□□□ -2.09
ZNF540-207ENST00000589285 Q6ZQY7 126 aa1.98□□□□□ -2.09
ZNF540-207ENST00000589285 DIRC1Q969H9 104 aa1.98□□□□□ -2.09
ZNF540-207ENST00000589285 DNAH8Q96JB1 4490 aa1.98□□□□□ -2.09
ZNF540-207ENST00000589285 FAT3Q8TDW7 4589 aa1.98□□□□□ -2.09
ZNF540-207ENST00000589285 DNAL4O96015 105 aa1.98□□□□□ -2.09
ZNF540-207ENST00000589285 LINC01554Q52M75 96 aa1.98□□□□□ -2.09
ZNF540-207ENST00000589285 LRP1Q07954 4544 aaKnown RBP1.98□□□□□ -2.09
ZNF540-207ENST00000589285 PSPHP1O15172 72 aa1.97□□□□□ -2.09
ZNF540-207ENST00000589285 COX17Q14061 63 aa1.97□□□□□ -2.09
ZNF540-207ENST00000589285 SPACA4Q8TDM5 124 aa1.97□□□□□ -2.09
ZNF540-207ENST00000589285 A8MU10 97 aa1.97□□□□□ -2.09
ZNF540-207ENST00000589285 ATP11AUNQ6ZP68 121 aa1.97□□□□□ -2.09
ZNF540-207ENST00000589285 SNURFQ9Y675 71 aa1.97□□□□□ -2.09
ZNF540-207ENST00000589285 PKD1P98161 4303 aa1.97□□□□□ -2.09
ZNF540-207ENST00000589285 HECTD4Q9Y4D8 3996 aa1.97□□□□□ -2.09
ZNF540-207ENST00000589285 RYR1P21817 5038 aa1.97□□□□□ -2.09
ZNF540-207ENST00000589285 TRAV7A0A075B6U4 112 aa1.97□□□□□ -2.09
ZNF540-207ENST00000589285 Q1T7F1 81 aa1.97□□□□□ -2.09
ZNF540-207ENST00000589285 IGLV1-50A0A075B6I6 118 aa1.96□□□□□ -2.1
ZNF540-207ENST00000589285 BCE1O60756 84 aa1.96□□□□□ -2.1
ZNF540-207ENST00000589285 OBSCN-AS1Q96MR7 158 aa1.96□□□□□ -2.1
ZNF540-207ENST00000589285 PKHD1L1Q86WI1 4243 aa1.96□□□□□ -2.1
ZNF540-207ENST00000589285 HERC2O95714 4834 aa1.96□□□□□ -2.1
ZNF540-207ENST00000589285 VPS13BQ7Z7G8 4022 aa1.96□□□□□ -2.1
ZNF540-207ENST00000589285 COX7BP24311 80 aa1.96□□□□□ -2.1
ZNF540-207ENST00000589285 Q9BRP9 147 aa1.96□□□□□ -2.1
ZNF540-207ENST00000589285 BAALC-AS2P0C853 105 aa1.95□□□□□ -2.1
ZNF540-207ENST00000589285 ATP5EP2Q5VTU8 51 aa1.95□□□□□ -2.1
ZNF540-207ENST00000589285 A6NN06 94 aa1.95□□□□□ -2.1
ZNF540-207ENST00000589285 ZNF861PO60384 105 aa1.95□□□□□ -2.1
ZNF540-207ENST00000589285 RPL28P46779 137 aaKnown RBP1.95□□□□□ -2.1
ZNF540-207ENST00000589285 DEFB116Q30KQ4 102 aa1.95□□□□□ -2.1
ZNF540-207ENST00000589285 Q5VSD8 79 aa1.95□□□□□ -2.1
ZNF540-207ENST00000589285 LINC00846Q9NV44 126 aa1.95□□□□□ -2.1
ZNF540-207ENST00000589285 IGLV6-57P01721 117 aa1.95□□□□□ -2.1
ZNF540-207ENST00000589285 RPL37AP61513 92 aaKnown RBP1.95□□□□□ -2.1
ZNF540-207ENST00000589285 C14orf132Q9NPU4 83 aa1.95□□□□□ -2.1
ZNF540-207ENST00000589285 IGHV6-1A0A0B4J1U7 121 aa1.94□□□□□ -2.1
ZNF540-207ENST00000589285 TRAV22A0A0B4J277 110 aa1.94□□□□□ -2.1
ZNF540-207ENST00000589285 TLX1NBP0CAT3 122 aa1.94□□□□□ -2.1
ZNF540-207ENST00000589285 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.94□□□□□ -2.1
ZNF540-207ENST00000589285 HCG22E2RYF7 251 aa1.94□□□□□ -2.1
ZNF540-207ENST00000589285 SPINK6Q6UWN8 80 aa1.94□□□□□ -2.1
ZNF540-207ENST00000589285 Q6ZRX8 168 aa1.94□□□□□ -2.1
ZNF540-207ENST00000589285 RETNLBQ9BQ08 111 aa1.94□□□□□ -2.1
ZNF540-207ENST00000589285 CHKB-CPT1BH3BT56 60 aa1.93□□□□□ -2.1
ZNF540-207ENST00000589285 LCE3AQ5TA76 89 aa1.93□□□□□ -2.1
ZNF540-207ENST00000589285 PLAC8Q9NZF1 115 aa1.93□□□□□ -2.1
ZNF540-207ENST00000589285 MOBPQ13875 183 aa1.93□□□□□ -2.1
ZNF540-207ENST00000589285 LINC00575Q6W349 94 aa1.93□□□□□ -2.1
ZNF540-207ENST00000589285 HSPG2P98160 4391 aa1.93□□□□□ -2.1
ZNF540-207ENST00000589285 IGLV7-43P04211 117 aa1.93□□□□□ -2.1
ZNF540-207ENST00000589285 ELOF1P60002 83 aaKnown RBP1.93□□□□□ -2.1
ZNF540-207ENST00000589285 KCNQ1DNQ9H478 68 aa1.93□□□□□ -2.1
ZNF540-207ENST00000589285 ORMDL1Q9P0S3 153 aa1.92□□□□□ -2.1
ZNF540-207ENST00000589285 ABCA13Q86UQ4 5058 aa1.92□□□□□ -2.1
ZNF540-207ENST00000589285 PCLOQ9Y6V0 5065 aa1.92□□□□□ -2.1
ZNF540-207ENST00000589285 TRBV7-4A0A0J9YYF1 115 aa1.91□□□□□ -2.1
ZNF540-207ENST00000589285 hDV103S1A0JD37 113 aa1.91□□□□□ -2.1
ZNF540-207ENST00000589285 Q6ZSA8 131 aa1.91□□□□□ -2.1
ZNF540-207ENST00000589285 A6NED7 52 aa1.91□□□□□ -2.1
ZNF540-207ENST00000589285 H0YGX0 51 aa1.91□□□□□ -2.1
ZNF540-207ENST00000589285 TMEM254Q8TBM7 123 aa1.91□□□□□ -2.1
ZNF540-207ENST00000589285 KRTAP4-16G5E9R7 235 aaPredicted RBP1.91□□□□□ -2.1
ZNF540-207ENST00000589285 Q5VV11 94 aa1.91□□□□□ -2.1
ZNF540-207ENST00000589285 LCE3DQ9BYE3 92 aa1.91□□□□□ -2.1
ZNF540-207ENST00000589285 HERC1Q15751 4861 aa1.9□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms