RNA–Protein interactions for RNA: ENST00000589239.5

RFX1-205, Transcript of regulatory factor X1, humanhuman

TSL 2

Gene RFX1, Length 2,122 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-205ENST00000589239 MPLKIPQ8TAP9 179 aa14.61□□□□□ -0.07
RFX1-205ENST00000589239 FLG2Q5D862 2391 aaPredicted RBP14.6□□□□□ -0.07
RFX1-205ENST00000589239 PRR26Q8N8Z3 221 aa14.6□□□□□ -0.07
RFX1-205ENST00000589239 MYCBP2O75592 4640 aa14.59□□□□□ -0.07
RFX1-205ENST00000589239 A0A0G2JQZ4 141 aa14.59□□□□□ -0.07
RFX1-205ENST00000589239 IGLV8-61A0A075B6I0 122 aa14.58□□□□□ -0.08
RFX1-205ENST00000589239 Q8NBF4 154 aa14.56□□□□□ -0.08
RFX1-205ENST00000589239 FAT3Q8TDW7 4589 aa14.55□□□□□ -0.08
RFX1-205ENST00000589239 C1orf195Q5TG92 126 aa14.55□□□□□ -0.08
RFX1-205ENST00000589239 IGFL1Q6UW32 110 aa14.54□□□□□ -0.08
RFX1-205ENST00000589239 ABCA13Q86UQ4 5058 aa14.54□□□□□ -0.08
RFX1-205ENST00000589239 A0A1B0GW54 56 aa14.53□□□□□ -0.08
RFX1-205ENST00000589239 TYMSOSQ8TAI1 123 aa14.51□□□□□ -0.09
RFX1-205ENST00000589239 hDV103S1A0JD37 113 aa14.48□□□□□ -0.09
RFX1-205ENST00000589239 SSBP3-AS1Q7Z2R9 100 aa14.48□□□□□ -0.09
RFX1-205ENST00000589239 TNXBP22105 4242 aa14.46□□□□□ -0.09
RFX1-205ENST00000589239 V9GYY9 64 aa14.45□□□□□ -0.1
RFX1-205ENST00000589239 A0A1W2PNM2 257 aa14.44□□□□□ -0.1
RFX1-205ENST00000589239 Q1T7F1 81 aa14.41□□□□□ -0.1
RFX1-205ENST00000589239 ZCCHC13Q8WW36 166 aaKnown RBP14.41□□□□□ -0.1
RFX1-205ENST00000589239 KRTAP10-8P60410 259 aa14.39□□□□□ -0.11
RFX1-205ENST00000589239 PRR15Q8IV56 129 aa14.38□□□□□ -0.11
RFX1-205ENST00000589239 C1orf64Q8NEQ6 169 aa14.37□□□□□ -0.11
RFX1-205ENST00000589239 LINC00304Q8N9R0 145 aa14.34□□□□□ -0.11
RFX1-205ENST00000589239 MT1HL1P0DM35 61 aa14.32□□□□□ -0.12
RFX1-205ENST00000589239 CYP4F30PQ9H0H9 118 aa14.31□□□□□ -0.12
RFX1-205ENST00000589239 DSCR10P59022 87 aa14.3□□□□□ -0.12
RFX1-205ENST00000589239 C4orf48Q5BLP8 95 aa14.3□□□□□ -0.12
RFX1-205ENST00000589239 CD164Q04900 197 aa14.3□□□□□ -0.12
RFX1-205ENST00000589239 A0A087WSZ3 146 aa14.29□□□□□ -0.12
RFX1-205ENST00000589239 SEC61GP60059 68 aa14.29□□□□□ -0.12
RFX1-205ENST00000589239 KRTAP29-1A8MX34 341 aaPredicted RBP14.27□□□□□ -0.13
RFX1-205ENST00000589239 K7EQZ3 153 aa14.26□□□□□ -0.13
RFX1-205ENST00000589239 PCLOQ9Y6V0 5065 aa14.24□□□□□ -0.13
RFX1-205ENST00000589239 SPINK1P00995 79 aa14.24□□□□□ -0.13
RFX1-205ENST00000589239 SPAG11AQ6PDA7 123 aa14.24□□□□□ -0.13
RFX1-205ENST00000589239 HCG22E2RYF7 251 aa14.22□□□□□ -0.13
RFX1-205ENST00000589239 NDUFB1O75438 58 aa14.21□□□□□ -0.13
RFX1-205ENST00000589239 TRAV22A0A0B4J277 110 aa14.21□□□□□ -0.13
RFX1-205ENST00000589239 DMBT1Q9UGM3 2413 aaPredicted RBP14.2□□□□□ -0.14
RFX1-205ENST00000589239 PMAIP1Q13794 54 aa14.18□□□□□ -0.14
RFX1-205ENST00000589239 PSPHP1O15172 72 aa14.16□□□□□ -0.14
RFX1-205ENST00000589239 LIMD2Q9BT23 127 aa14.14□□□□□ -0.15
RFX1-205ENST00000589239 RPS29P62273 56 aaKnown RBP14.14□□□□□ -0.15
RFX1-205ENST00000589239 J3QL48 77 aa14.13□□□□□ -0.15
RFX1-205ENST00000589239 PRR4Q16378 134 aa14.11□□□□□ -0.15
RFX1-205ENST00000589239 MP68P56378 58 aa14.1□□□□□ -0.15
RFX1-205ENST00000589239 DEFB116Q30KQ4 102 aa14.06□□□□□ -0.16
RFX1-205ENST00000589239 ASB16-AS1Q495Z4 193 aa14.05□□□□□ -0.16
RFX1-205ENST00000589239 Q96NJ1 140 aa14.05□□□□□ -0.16
RFX1-205ENST00000589239 LINC00472Q9H8W2 130 aa14.05□□□□□ -0.16
RFX1-205ENST00000589239 A8MUN3 132 aa14.04□□□□□ -0.16
RFX1-205ENST00000589239 SPANXA2-OT1Q8N9U9 137 aa14.03□□□□□ -0.16
RFX1-205ENST00000589239 RETNLBQ9BQ08 111 aa14.02□□□□□ -0.17
RFX1-205ENST00000589239 WFDC13Q8IUB5 93 aa14.01□□□□□ -0.17
RFX1-205ENST00000589239 H3BPC8 53 aa14□□□□□ -0.17
RFX1-205ENST00000589239 Q5VV11 94 aa14□□□□□ -0.17
RFX1-205ENST00000589239 LINC00208Q96KT6 92 aa13.99□□□□□ -0.17
RFX1-205ENST00000589239 H0Y9P7 68 aa13.93□□□□□ -0.18
RFX1-205ENST00000589239 Q8N9P0 234 aaPredicted RBP13.93□□□□□ -0.18
RFX1-205ENST00000589239 CASC2Q6XLA1 102 aa13.88□□□□□ -0.19
RFX1-205ENST00000589239 CHKB-CPT1BH3BT56 60 aa13.86□□□□□ -0.19
RFX1-205ENST00000589239 A8MU10 97 aa13.85□□□□□ -0.19
RFX1-205ENST00000589239 HERC1Q15751 4861 aa13.83□□□□□ -0.2
RFX1-205ENST00000589239 A8MWP4 228 aa13.82□□□□□ -0.2
RFX1-205ENST00000589239 PRR15LQ9BU68 103 aa13.82□□□□□ -0.2
RFX1-205ENST00000589239 Q75L30 129 aa13.79□□□□□ -0.2
RFX1-205ENST00000589239 IGHV6-1A0A0B4J1U7 121 aa13.76□□□□□ -0.21
RFX1-205ENST00000589239 LOC101927531A0A1B0GV80 90 aa13.76□□□□□ -0.21
RFX1-205ENST00000589239 A0A1B0GVX0 72 aa13.75□□□□□ -0.21
RFX1-205ENST00000589239 KTN1-AS1Q86SY8 53 aa13.75□□□□□ -0.21
RFX1-205ENST00000589239 IGLV7-46A0A075B6I9 117 aa13.73□□□□□ -0.21
RFX1-205ENST00000589239 ATP11AUNQ6ZP68 121 aa13.73□□□□□ -0.21
RFX1-205ENST00000589239 COA5Q86WW8 74 aa13.73□□□□□ -0.21
RFX1-205ENST00000589239 NOTCH2NLQ7Z3S9 236 aa13.7□□□□□ -0.22
RFX1-205ENST00000589239 LCA10Q71F78 164 aa13.69□□□□□ -0.22
RFX1-205ENST00000589239 A6NED7 52 aa13.67□□□□□ -0.22
RFX1-205ENST00000589239 MMP24-AS1A0A0U1RRL7 71 aa13.66□□□□□ -0.22
RFX1-205ENST00000589239 C9orf92A6NGG3 77 aa13.66□□□□□ -0.22
RFX1-205ENST00000589239 SPTSSBQ8NFR3 76 aa13.65□□□□□ -0.22
RFX1-205ENST00000589239 LINC00313P59037 77 aa13.63□□□□□ -0.23
RFX1-205ENST00000589239 C8orf17Q9NRJ1 99 aa13.63□□□□□ -0.23
RFX1-205ENST00000589239 CDC42SE1Q9NRR8 79 aa13.62□□□□□ -0.23
RFX1-205ENST00000589239 LPAP08519 4548 aa13.61□□□□□ -0.23
RFX1-205ENST00000589239 NDUFS5O43920 106 aa13.61□□□□□ -0.23
RFX1-205ENST00000589239 C8orf87E5RJ46 101 aa13.6□□□□□ -0.23
RFX1-205ENST00000589239 A6NN06 94 aa13.6□□□□□ -0.23
RFX1-205ENST00000589239 KRTAP13-3Q3SY46 172 aa13.59□□□□□ -0.23
RFX1-205ENST00000589239 TP53AIP1Q9HCN2 124 aa13.58□□□□□ -0.23
RFX1-205ENST00000589239 LINC01558Q9Y6Z2 57 aa13.58□□□□□ -0.23
RFX1-205ENST00000589239 RBM12B-AS1Q9P1G2 102 aa13.55□□□□□ -0.24
RFX1-205ENST00000589239 TPRXLQ17RH7 258 aa13.54□□□□□ -0.24
RFX1-205ENST00000589239 HMCN2Q8NDA2 5059 aa13.54□□□□□ -0.24
RFX1-205ENST00000589239 PCOTHQ58A44 107 aa13.53□□□□□ -0.24
RFX1-205ENST00000589239 KRTAP16-1A8MUX0 517 aa13.52□□□□□ -0.25
RFX1-205ENST00000589239 MRPL34Q9BQ48 92 aaKnown RBP13.45□□□□□ -0.26
RFX1-205ENST00000589239 LRP2P98164 4655 aa13.44□□□□□ -0.26
RFX1-205ENST00000589239 XP32Q5T750 250 aa13.44□□□□□ -0.26
RFX1-205ENST00000589239 C7orf65Q6ZTY9 151 aa13.43□□□□□ -0.26
RFX1-205ENST00000589239 HRES1P13985 223 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms