RNA–Protein interactions for RNA: ENST00000589104.5

KDM4B-208, Transcript of lysine demethylase 4B, humanhuman

TSL 2

Gene KDM4B, Length 3,470 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4B-208ENST00000589104 LINC00313P59037 77 aa8.15□□□□□ -1.1
KDM4B-208ENST00000589104 FAT2Q9NYQ8 4349 aa8.15□□□□□ -1.11
KDM4B-208ENST00000589104 Q6ZR54 194 aa8.14□□□□□ -1.11
KDM4B-208ENST00000589104 KRTAP13-3Q3SY46 172 aa8.13□□□□□ -1.11
KDM4B-208ENST00000589104 PRLHP81277 87 aa8.12□□□□□ -1.11
KDM4B-208ENST00000589104 PANO1I0J062 215 aa8.12□□□□□ -1.11
KDM4B-208ENST00000589104 A0A087WSZ3 146 aa8.1□□□□□ -1.11
KDM4B-208ENST00000589104 SRRM2Q9UQ35 2752 aaKnown RBP8.1□□□□□ -1.11
KDM4B-208ENST00000589104 SPACA4Q8TDM5 124 aa8.1□□□□□ -1.11
KDM4B-208ENST00000589104 CASC2Q6XLA1 102 aa8.08□□□□□ -1.12
KDM4B-208ENST00000589104 IGKV2-24A0A0C4DH68 120 aa8.08□□□□□ -1.12
KDM4B-208ENST00000589104 LINC01554Q52M75 96 aa8.06□□□□□ -1.12
KDM4B-208ENST00000589104 IGLV7-46A0A075B6I9 117 aa8.05□□□□□ -1.12
KDM4B-208ENST00000589104 SACSQ9NZJ4 4579 aa8.05□□□□□ -1.12
KDM4B-208ENST00000589104 C14orf177Q52M58 125 aa8.05□□□□□ -1.12
KDM4B-208ENST00000589104 WWC2-AS2Q96NR7 200 aa8.02□□□□□ -1.12
KDM4B-208ENST00000589104 PRR26Q8N8Z3 221 aa8□□□□□ -1.13
KDM4B-208ENST00000589104 PKHD1L1Q86WI1 4243 aa8□□□□□ -1.13
KDM4B-208ENST00000589104 PKHD1P08F94 4074 aa7.98□□□□□ -1.13
KDM4B-208ENST00000589104 LINC01558Q9Y6Z2 57 aa7.97□□□□□ -1.13
KDM4B-208ENST00000589104 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.97□□□□□ -1.13
KDM4B-208ENST00000589104 NBDYA0A0U1RRE5 68 aa7.96□□□□□ -1.13
KDM4B-208ENST00000589104 TP53AIP1Q9HCN2 124 aa7.95□□□□□ -1.14
KDM4B-208ENST00000589104 STAB2Q8WWQ8 2551 aa7.93□□□□□ -1.14
KDM4B-208ENST00000589104 IGLV5-52A0A0A0MRZ9 124 aa7.92□□□□□ -1.14
KDM4B-208ENST00000589104 C8orf17Q9NRJ1 99 aa7.92□□□□□ -1.14
KDM4B-208ENST00000589104 RETNLBQ9BQ08 111 aa7.91□□□□□ -1.14
KDM4B-208ENST00000589104 UBE2DNLQ8IWF7 75 aa7.91□□□□□ -1.14
KDM4B-208ENST00000589104 LRP1BQ9NZR2 4599 aa7.9□□□□□ -1.14
KDM4B-208ENST00000589104 HRES1P13985 223 aa7.9□□□□□ -1.14
KDM4B-208ENST00000589104 A0A1B0GVX0 72 aa7.9□□□□□ -1.14
KDM4B-208ENST00000589104 HYDINQ4G0P3 5121 aa7.88□□□□□ -1.15
KDM4B-208ENST00000589104 CSAG1Q6PB30 78 aa7.87□□□□□ -1.15
KDM4B-208ENST00000589104 A0A087X002 238 aa7.86□□□□□ -1.15
KDM4B-208ENST00000589104 NOTCH2NLQ7Z3S9 236 aa7.86□□□□□ -1.15
KDM4B-208ENST00000589104 VPS13BQ7Z7G8 4022 aa7.86□□□□□ -1.15
KDM4B-208ENST00000589104 A0A087WTM6 91 aa7.86□□□□□ -1.15
KDM4B-208ENST00000589104 PSORS1C2Q9UIG4 136 aa7.83□□□□□ -1.16
KDM4B-208ENST00000589104 ZNF706Q9Y5V0 76 aaPredicted RBP7.83□□□□□ -1.16
KDM4B-208ENST00000589104 PLA2G1BP04054 148 aaKnown RBP7.82□□□□□ -1.16
KDM4B-208ENST00000589104 NUPR2A6NF83 97 aa7.82□□□□□ -1.16
KDM4B-208ENST00000589104 ZNF861PO60384 105 aa7.82□□□□□ -1.16
KDM4B-208ENST00000589104 KRTAP16-1A8MUX0 517 aa7.8□□□□□ -1.16
KDM4B-208ENST00000589104 MRPL34Q9BQ48 92 aaKnown RBP7.8□□□□□ -1.16
KDM4B-208ENST00000589104 APOBP04114 4563 aaKnown RBP7.8□□□□□ -1.16
KDM4B-208ENST00000589104 Q5W150 140 aa7.79□□□□□ -1.16
KDM4B-208ENST00000589104 IGHV6-1A0A0B4J1U7 121 aa7.76□□□□□ -1.17
KDM4B-208ENST00000589104 MEGF8Q7Z7M0 2845 aa7.76□□□□□ -1.17
KDM4B-208ENST00000589104 IGLV9-49A0A0B4J1Y8 123 aa7.75□□□□□ -1.17
KDM4B-208ENST00000589104 Q6ZSA8 131 aa7.75□□□□□ -1.17
KDM4B-208ENST00000589104 A0A1B0GU69 56 aa7.75□□□□□ -1.17
KDM4B-208ENST00000589104 A0A0A0MQY5 61 aa7.74□□□□□ -1.17
KDM4B-208ENST00000589104 RTL8CO15255 209 aa7.73□□□□□ -1.17
KDM4B-208ENST00000589104 C1orf134Q5TEV5 83 aa7.73□□□□□ -1.17
KDM4B-208ENST00000589104 FLG2Q5D862 2391 aaPredicted RBP7.73□□□□□ -1.17
KDM4B-208ENST00000589104 DNHD1Q96M86 4753 aa7.72□□□□□ -1.17
KDM4B-208ENST00000589104 DMAC1Q96GE9 116 aa7.71□□□□□ -1.17
KDM4B-208ENST00000589104 IGLV7-43P04211 117 aa7.71□□□□□ -1.18
KDM4B-208ENST00000589104 MIR22HGQ0VDD5 57 aa7.7□□□□□ -1.18
KDM4B-208ENST00000589104 SPINK6Q6UWN8 80 aa7.68□□□□□ -1.18
KDM4B-208ENST00000589104 KRTAP13-2Q52LG2 175 aa7.68□□□□□ -1.18
KDM4B-208ENST00000589104 SSBP3-AS1Q7Z2R9 100 aa7.66□□□□□ -1.18
KDM4B-208ENST00000589104 CDK2AP2O75956 126 aa7.66□□□□□ -1.18
KDM4B-208ENST00000589104 KRTAP1-4P0C5Y4 121 aa7.66□□□□□ -1.18
KDM4B-208ENST00000589104 HSPG2P98160 4391 aa7.65□□□□□ -1.18
KDM4B-208ENST00000589104 TNXBP22105 4242 aa7.64□□□□□ -1.19
KDM4B-208ENST00000589104 ANAPC11Q9NYG5 84 aa7.64□□□□□ -1.19
KDM4B-208ENST00000589104 ACYP2P14621 99 aa7.63□□□□□ -1.19
KDM4B-208ENST00000589104 UQCR11O14957 56 aa7.62□□□□□ -1.19
KDM4B-208ENST00000589104 IGKV2-30P06310 120 aa7.61□□□□□ -1.19
KDM4B-208ENST00000589104 SPATA8Q6RVD6 105 aa7.61□□□□□ -1.19
KDM4B-208ENST00000589104 CRIPTQ9P021 101 aa7.57□□□□□ -1.2
KDM4B-208ENST00000589104 CIRBP-AS1Q8TBR5 109 aa7.53□□□□□ -1.2
KDM4B-208ENST00000589104 ROMO1P60602 79 aa7.53□□□□□ -1.2
KDM4B-208ENST00000589104 SPINK1P00995 79 aa7.52□□□□□ -1.21
KDM4B-208ENST00000589104 KRTAP10-2P60368 255 aa7.52□□□□□ -1.21
KDM4B-208ENST00000589104 DYNC1H1Q14204 4646 aaKnown RBP7.52□□□□□ -1.21
KDM4B-208ENST00000589104 RPS29P62273 56 aaKnown RBP7.51□□□□□ -1.21
KDM4B-208ENST00000589104 FAM229AH3BQW9 127 aa7.51□□□□□ -1.21
KDM4B-208ENST00000589104 TGP01266 2768 aa7.5□□□□□ -1.21
KDM4B-208ENST00000589104 IGKV2D-30A0A075B6S6 120 aa7.44□□□□□ -1.22
KDM4B-208ENST00000589104 KRTAP10-4P60372 401 aaPredicted RBP7.44□□□□□ -1.22
KDM4B-208ENST00000589104 KRTAP10-1P60331 282 aa7.44□□□□□ -1.22
KDM4B-208ENST00000589104 FAT3Q8TDW7 4589 aa7.42□□□□□ -1.22
KDM4B-208ENST00000589104 KRTAP25-1Q3LHN0 102 aa7.41□□□□□ -1.22
KDM4B-208ENST00000589104 FAT1Q14517 4588 aa7.4□□□□□ -1.23
KDM4B-208ENST00000589104 DMBT1Q9UGM3 2413 aaPredicted RBP7.38□□□□□ -1.23
KDM4B-208ENST00000589104 P0C880 135 aa7.35□□□□□ -1.23
KDM4B-208ENST00000589104 A8MUU9 505 aa7.35□□□□□ -1.23
KDM4B-208ENST00000589104 LY6G6CO95867 125 aa7.35□□□□□ -1.23
KDM4B-208ENST00000589104 RYR2Q92736 4967 aa7.33□□□□□ -1.24
KDM4B-208ENST00000589104 LRP1Q07954 4544 aaKnown RBP7.33□□□□□ -1.24
KDM4B-208ENST00000589104 C20orf166-AS1Q96NR2 134 aa7.32□□□□□ -1.24
KDM4B-208ENST00000589104 KRTAP3-1Q9BYR8 98 aa7.32□□□□□ -1.24
KDM4B-208ENST00000589104 LINC00304Q8N9R0 145 aa7.31□□□□□ -1.24
KDM4B-208ENST00000589104 SPINT4Q6UDR6 99 aa7.28□□□□□ -1.24
KDM4B-208ENST00000589104 Q8N1X5 172 aa7.26□□□□□ -1.25
KDM4B-208ENST00000589104 A0A1B0GVY2 172 aa7.24□□□□□ -1.25
KDM4B-208ENST00000589104 NDUFAF8A1L188 74 aa7.23□□□□□ -1.25
KDM4B-208ENST00000589104 H0YAA0 97 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms