RNA–Protein interactions for RNA: ENST00000589064.5

MBD3-205, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 2

Gene MBD3, Length 1,475 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-205ENST00000589064 LINC00472Q9H8W2 130 aa10.76□□□□□ -0.69
MBD3-205ENST00000589064 M0R2T5 61 aa10.74□□□□□ -0.69
MBD3-205ENST00000589064 DSCR8Q96T75 97 aa10.74□□□□□ -0.69
MBD3-205ENST00000589064 JMJD7-PLA2G4BH0Y9G9 81 aa10.74□□□□□ -0.69
MBD3-205ENST00000589064 NOTCH2NLQ7Z3S9 236 aa10.72□□□□□ -0.69
MBD3-205ENST00000589064 KRTAP10-6P60371 365 aaPredicted RBP10.71□□□□□ -0.69
MBD3-205ENST00000589064 GTF2H5Q6ZYL4 71 aa10.71□□□□□ -0.69
MBD3-205ENST00000589064 KRTAP9-6A0A140TA67 174 aa10.69□□□□□ -0.7
MBD3-205ENST00000589064 KRTAP16-1A8MUX0 517 aa10.69□□□□□ -0.7
MBD3-205ENST00000589064 LORP23490 312 aaPredicted RBP10.69□□□□□ -0.7
MBD3-205ENST00000589064 IGHV6-1A0A0B4J1U7 121 aa10.68□□□□□ -0.7
MBD3-205ENST00000589064 SMCPP49901 116 aaPredicted RBP10.68□□□□□ -0.7
MBD3-205ENST00000589064 PRO0461Q9UI25 63 aa10.68□□□□□ -0.7
MBD3-205ENST00000589064 C14orf132Q9NPU4 83 aa10.67□□□□□ -0.7
MBD3-205ENST00000589064 FLGP20930 4061 aaPredicted RBP10.66□□□□□ -0.7
MBD3-205ENST00000589064 Q6ZQT0 140 aa10.65□□□□□ -0.7
MBD3-205ENST00000589064 LOC110117498A0A087WWA1 95 aa10.64□□□□□ -0.71
MBD3-205ENST00000589064 PDE6GP18545 87 aa10.61□□□□□ -0.71
MBD3-205ENST00000589064 A0A1B0GVX0 72 aa10.6□□□□□ -0.71
MBD3-205ENST00000589064 C21orf62-AS1Q17RA5 79 aa10.59□□□□□ -0.71
MBD3-205ENST00000589064 F8W1H4 67 aa10.58□□□□□ -0.72
MBD3-205ENST00000589064 C8orf87E5RJ46 101 aa10.57□□□□□ -0.72
MBD3-205ENST00000589064 J3KT08 172 aa10.56□□□□□ -0.72
MBD3-205ENST00000589064 A0A1B0GV90 55 aa10.54□□□□□ -0.72
MBD3-205ENST00000589064 A0A1B0GW54 56 aa10.53□□□□□ -0.72
MBD3-205ENST00000589064 FSIP2Q5CZC0 6907 aa10.5□□□□□ -0.73
MBD3-205ENST00000589064 NDUFB1O75438 58 aa10.49□□□□□ -0.73
MBD3-205ENST00000589064 ETDBQ3ZM63 59 aa10.49□□□□□ -0.73
MBD3-205ENST00000589064 CRCT1Q9UGL9 99 aa10.49□□□□□ -0.73
MBD3-205ENST00000589064 HRES1P13985 223 aa10.45□□□□□ -0.74
MBD3-205ENST00000589064 FAM236DA0A1B0GTK5 79 aa10.44□□□□□ -0.74
MBD3-205ENST00000589064 FAM236CP0DP71 79 aa10.44□□□□□ -0.74
MBD3-205ENST00000589064 A8MWP4 228 aa10.43□□□□□ -0.74
MBD3-205ENST00000589064 MPLKIPQ8TAP9 179 aa10.42□□□□□ -0.74
MBD3-205ENST00000589064 ZCCHC13Q8WW36 166 aaKnown RBP10.42□□□□□ -0.74
MBD3-205ENST00000589064 IGKV3D-7A0A0C4DH55 119 aa10.42□□□□□ -0.74
MBD3-205ENST00000589064 C8orf17Q9NRJ1 99 aa10.42□□□□□ -0.74
MBD3-205ENST00000589064 NREPQ16612 68 aa10.41□□□□□ -0.74
MBD3-205ENST00000589064 RBM12B-AS1Q9P1G2 102 aa10.41□□□□□ -0.74
MBD3-205ENST00000589064 Q8N9P0 234 aaPredicted RBP10.4□□□□□ -0.74
MBD3-205ENST00000589064 SPINK7P58062 85 aa10.35□□□□□ -0.75
MBD3-205ENST00000589064 PRR15Q8IV56 129 aa10.35□□□□□ -0.75
MBD3-205ENST00000589064 KRTAP9-8Q9BYQ0 159 aa10.35□□□□□ -0.75
MBD3-205ENST00000589064 Q6ZVQ6 151 aa10.33□□□□□ -0.76
MBD3-205ENST00000589064 LINC00846Q9NV44 126 aa10.32□□□□□ -0.76
MBD3-205ENST00000589064 UBL5Q9BZL1 73 aa10.27□□□□□ -0.77
MBD3-205ENST00000589064 MMP24-AS1A0A0U1RRL7 71 aa10.26□□□□□ -0.77
MBD3-205ENST00000589064 BPY2O14599 106 aa10.26□□□□□ -0.77
MBD3-205ENST00000589064 K7EQZ3 153 aa10.24□□□□□ -0.77
MBD3-205ENST00000589064 TMEM254Q8TBM7 123 aa10.23□□□□□ -0.77
MBD3-205ENST00000589064 MRPL34Q9BQ48 92 aaKnown RBP10.23□□□□□ -0.77
MBD3-205ENST00000589064 hDV103S1A0JD37 113 aa10.2□□□□□ -0.78
MBD3-205ENST00000589064 MT2AP02795 61 aa10.2□□□□□ -0.78
MBD3-205ENST00000589064 ACYP1P07311 99 aa10.19□□□□□ -0.78
MBD3-205ENST00000589064 WFDC13Q8IUB5 93 aa10.18□□□□□ -0.78
MBD3-205ENST00000589064 FAM240AA0A1B0GVK7 77 aa10.17□□□□□ -0.78
MBD3-205ENST00000589064 NDUFS5O43920 106 aa10.17□□□□□ -0.78
MBD3-205ENST00000589064 Q8N9L7 120 aa10.15□□□□□ -0.78
MBD3-205ENST00000589064 MT1FP04733 61 aa10.12□□□□□ -0.79
MBD3-205ENST00000589064 KRTAP10-10P60014 251 aa10.1□□□□□ -0.79
MBD3-205ENST00000589064 CXCL6P80162 114 aa10.09□□□□□ -0.79
MBD3-205ENST00000589064 USH2AO75445 5202 aa10.07□□□□□ -0.8
MBD3-205ENST00000589064 J3QR89 54 aa10.06□□□□□ -0.8
MBD3-205ENST00000589064 Q5W150 140 aa10.06□□□□□ -0.8
MBD3-205ENST00000589064 CASC2Q6XLA1 102 aa10.05□□□□□ -0.8
MBD3-205ENST00000589064 KRTAP9-3Q9BYQ3 159 aa10.03□□□□□ -0.8
MBD3-205ENST00000589064 IGKV2D-30A0A075B6S6 120 aa10.02□□□□□ -0.81
MBD3-205ENST00000589064 IGKV2-30P06310 120 aa10.02□□□□□ -0.81
MBD3-205ENST00000589064 HCG22E2RYF7 251 aa10.01□□□□□ -0.81
MBD3-205ENST00000589064 ATP5EP2Q5VTU8 51 aa9.98□□□□□ -0.81
MBD3-205ENST00000589064 LINC00643Q86TS7 51 aa9.98□□□□□ -0.81
MBD3-205ENST00000589064 LCE2BO14633 110 aa9.98□□□□□ -0.81
MBD3-205ENST00000589064 H1FX-AS1Q4G0G2 97 aa9.97□□□□□ -0.81
MBD3-205ENST00000589064 C7orf65Q6ZTY9 151 aa9.96□□□□□ -0.82
MBD3-205ENST00000589064 SSPOA2VEC9 5147 aa9.96□□□□□ -0.82
MBD3-205ENST00000589064 K7ERU9 68 aa9.9□□□□□ -0.83
MBD3-205ENST00000589064 HIST1H4AP62805 103 aaKnown RBP9.9□□□□□ -0.83
MBD3-205ENST00000589064 C4orf26Q17RF5 130 aa9.85□□□□□ -0.83
MBD3-205ENST00000589064 A0A087WVE0 104 aa9.82□□□□□ -0.84
MBD3-205ENST00000589064 KRTAP19-1Q8IUB9 90 aa9.8□□□□□ -0.84
MBD3-205ENST00000589064 FCGBPQ9Y6R7 5405 aaPredicted RBP9.76□□□□□ -0.85
MBD3-205ENST00000589064 TP53AIP1Q9HCN2 124 aa9.75□□□□□ -0.85
MBD3-205ENST00000589064 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.74□□□□□ -0.85
MBD3-205ENST00000589064 KRTAP3-1Q9BYR8 98 aa9.72□□□□□ -0.85
MBD3-205ENST00000589064 MT-ATP8P03928 68 aa9.69□□□□□ -0.86
MBD3-205ENST00000589064 C1orf64Q8NEQ6 169 aa9.66□□□□□ -0.86
MBD3-205ENST00000589064 C5orf47Q569G3 176 aa9.66□□□□□ -0.86
MBD3-205ENST00000589064 IMUPQ9GZP8 106 aa9.66□□□□□ -0.86
MBD3-205ENST00000589064 KRTAP9-7A8MTY7 169 aa9.62□□□□□ -0.87
MBD3-205ENST00000589064 UQCRQO14949 82 aa9.61□□□□□ -0.87
MBD3-205ENST00000589064 TRAV22A0A0B4J277 110 aa9.6□□□□□ -0.87
MBD3-205ENST00000589064 S4R3F8 94 aa9.6□□□□□ -0.87
MBD3-205ENST00000589064 KRTAP19-6Q3LI70 58 aa9.59□□□□□ -0.87
MBD3-205ENST00000589064 OCR1Q9BZK8 76 aa9.57□□□□□ -0.88
MBD3-205ENST00000589064 CYP4F30PQ9H0H9 118 aa9.57□□□□□ -0.88
MBD3-205ENST00000589064 SCGB1A1P11684 91 aa9.55□□□□□ -0.88
MBD3-205ENST00000589064 CSAG1Q6PB30 78 aa9.55□□□□□ -0.88
MBD3-205ENST00000589064 LCA10Q71F78 164 aa9.55□□□□□ -0.88
MBD3-205ENST00000589064 H0Y9P7 68 aa9.53□□□□□ -0.88
MBD3-205ENST00000589064 FAM236AA0A1B0GUQ0 79 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms